EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSPMAG00000009335 (Gene tree)
Gene ID: -
Gene Symbol: -
Alias: -
Full Name: -
Gene Type: protein_coding
Species: Petromyzon_marinus
Status: putative
Strand: Minus strand
Length: 4052 bases
Position: chrGL479037:32891-36942
Accession: -
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSPMAP00000010262	MMR_HSR1	PF01926.23	2.9e-07	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSPMAT00000010308	-	664	-	ENSPMAP00000010262	207 (aa)	-	S4RYH1

Gene Model

Click here to download ENSPMAG00000009335's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSPMAG00000009335's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSPMAG00000009335	-	75	40.000	ENSPMAG00000001403	-	77	40.000
ENSPMAG00000009335	-	56	30.252	ENSPMAG00000010406	ARL4A	58	30.252
ENSPMAG00000009335	-	77	32.919	ENSPMAG00000000465	MRAS	80	35.465
ENSPMAG00000009335	-	79	54.268	ENSPMAG00000008764	RAB2B	89	54.268
ENSPMAG00000009335	-	56	30.172	ENSPMAG00000007507	arl8ba	60	30.172
ENSPMAG00000009335	-	86	42.938	ENSPMAG00000000008	rab5c	79	42.938
ENSPMAG00000009335	-	77	46.584	ENSPMAG00000005938	-	96	46.584
ENSPMAG00000009335	-	79	54.878	ENSPMAG00000006171	-	77	54.878
ENSPMAG00000009335	-	55	40.351	ENSPMAG00000004439	rab20	52	40.870
ENSPMAG00000009335	-	89	48.649	ENSPMAG00000001801	rab1ba	90	48.649
ENSPMAG00000009335	-	99	40.196	ENSPMAG00000001399	rab5c	89	40.196
ENSPMAG00000009335	-	83	38.710	ENSPMAG00000005537	rab27a	84	38.710
ENSPMAG00000009335	-	72	36.000	ENSPMAG00000004548	hrasb	82	36.875
ENSPMAG00000009335	-	85	50.286	ENSPMAG00000002006	-	81	50.286
ENSPMAG00000009335	-	75	32.903	ENSPMAG00000006835	-	70	34.545
ENSPMAG00000009335	-	75	32.278	ENSPMAG00000005048	MRAS	81	34.132
ENSPMAG00000009335	-	56	30.000	ENSPMAG00000010027	ARL4A	58	30.000
ENSPMAG00000009335	-	78	47.853	ENSPMAG00000005322	rab18b	78	47.853
ENSPMAG00000009335	-	85	44.000	ENSPMAG00000006105	rab30	83	44.000
ENSPMAG00000009335	-	75	39.752	ENSPMAG00000007247	rab33ba	67	39.752
ENSPMAG00000009335	-	83	43.860	ENSPMAG00000007867	rab5c	80	43.860

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSPMAG00000009335	-	100	80.952	ENSG00000185236	RAB11B	100	86.957	Homo_sapiens
ENSPMAG00000009335	-	99	80.769	ENSAMEG00000004955	RAB11B	92	80.769	Ailuropoda_melanoleuca
ENSPMAG00000009335	-	84	85.057	ENSACIG00000024374	rab11ba	72	85.057	Amphilophus_citrinellus
ENSPMAG00000009335	-	100	80.476	ENSAOCG00000018050	rab11ba	94	80.476	Amphiprion_ocellaris
ENSPMAG00000009335	-	100	80.000	ENSAPEG00000009177	rab11ba	94	80.000	Amphiprion_percula
ENSPMAG00000009335	-	100	80.000	ENSATEG00000023730	rab11ba	94	80.000	Anabas_testudineus
ENSPMAG00000009335	-	100	80.952	ENSANAG00000037616	RAB11B	88	94.268	Aotus_nancymaae
ENSPMAG00000009335	-	99	72.249	ENSACLG00000018852	-	91	72.249	Astatotilapia_calliptera
ENSPMAG00000009335	-	100	79.048	ENSACLG00000005420	rab11ba	94	79.048	Astatotilapia_calliptera
ENSPMAG00000009335	-	99	75.481	WBGene00004274	rab-11.1	93	75.481	Caenorhabditis_elegans
ENSPMAG00000009335	-	100	80.952	ENSCJAG00000010778	RAB11B	88	94.268	Callithrix_jacchus
ENSPMAG00000009335	-	100	80.952	ENSCAFG00000032060	RAB11B	94	80.952	Canis_familiaris
ENSPMAG00000009335	-	100	80.952	ENSCAFG00020022184	RAB11B	94	80.952	Canis_lupus_dingo
ENSPMAG00000009335	-	100	80.952	ENSTSYG00000014758	RAB11B	99	80.476	Carlito_syrichta
ENSPMAG00000009335	-	100	81.429	ENSCPOG00000030154	RAB11B	94	81.429	Cavia_porcellus
ENSPMAG00000009335	-	100	80.952	ENSCCAG00000031042	RAB11B	92	87.861	Cebus_capucinus
ENSPMAG00000009335	-	100	80.952	ENSCLAG00000003207	RAB11B	94	80.952	Chinchilla_lanigera
ENSPMAG00000009335	-	100	80.952	ENSCSAG00000008024	RAB11B	94	80.952	Chlorocebus_sabaeus
ENSPMAG00000009335	-	100	66.667	ENSCHOG00000013525	RAB11B	94	66.667	Choloepus_hoffmanni
ENSPMAG00000009335	-	100	78.261	ENSCING00000009526	-	94	78.261	Ciona_intestinalis
ENSPMAG00000009335	-	100	80.952	ENSCANG00000040517	RAB11B	94	80.952	Colobus_angolensis_palliatus
ENSPMAG00000009335	-	100	80.952	ENSCGRG00001013827	Rab11b	94	80.952	Cricetulus_griseus_chok1gshd
ENSPMAG00000009335	-	100	80.952	ENSCGRG00000010967	Rab11b	94	80.952	Cricetulus_griseus_crigri
ENSPMAG00000009335	-	100	80.476	ENSCSEG00000007121	rab11ba	79	80.476	Cynoglossus_semilaevis
ENSPMAG00000009335	-	100	80.000	ENSDARG00000041878	rab11ba	100	79.524	Danio_rerio
ENSPMAG00000009335	-	100	80.000	ENSDNOG00000004134	-	94	80.000	Dasypus_novemcinctus
ENSPMAG00000009335	-	100	80.952	ENSDNOG00000014618	RAB11B	91	80.952	Dasypus_novemcinctus
ENSPMAG00000009335	-	100	80.952	ENSDORG00000006304	Rab11b	94	80.952	Dipodomys_ordii
ENSPMAG00000009335	-	100	80.676	ENSEBUG00000015447	-	94	80.676	Eptatretus_burgeri
ENSPMAG00000009335	-	100	81.643	ENSEBUG00000011775	rab11ba	99	81.643	Eptatretus_burgeri
ENSPMAG00000009335	-	63	97.692	ENSEEUG00000009165	-	91	97.692	Erinaceus_europaeus
ENSPMAG00000009335	-	82	90.588	ENSELUG00000019240	-	87	90.588	Esox_lucius
ENSPMAG00000009335	-	100	80.952	ENSFCAG00000015216	RAB11B	94	80.952	Felis_catus
ENSPMAG00000009335	-	100	81.429	ENSFDAG00000019872	RAB11B	94	81.429	Fukomys_damarensis
ENSPMAG00000009335	-	100	80.000	ENSFHEG00000022642	rab11ba	94	80.000	Fundulus_heteroclitus
ENSPMAG00000009335	-	100	78.571	ENSGMOG00000007390	rab11ba	94	78.571	Gadus_morhua
ENSPMAG00000009335	-	100	79.524	ENSGAFG00000005679	rab11ba	94	79.524	Gambusia_affinis
ENSPMAG00000009335	-	100	80.476	ENSGAGG00000012557	-	94	80.476	Gopherus_agassizii
ENSPMAG00000009335	-	100	80.952	ENSHGLG00000014984	RAB11B	94	80.952	Heterocephalus_glaber_female
ENSPMAG00000009335	-	100	80.476	ENSHGLG00100003638	RAB11B	94	80.476	Heterocephalus_glaber_male
ENSPMAG00000009335	-	100	80.952	ENSSTOG00000031571	RAB11B	94	80.952	Ictidomys_tridecemlineatus
ENSPMAG00000009335	-	100	80.952	ENSJJAG00000018891	Rab11b	94	80.952	Jaculus_jaculus
ENSPMAG00000009335	-	100	80.000	ENSKMAG00000006082	-	94	80.000	Kryptolebias_marmoratus
ENSPMAG00000009335	-	100	80.000	ENSLBEG00000006087	rab11ba	94	80.000	Labrus_bergylta
ENSPMAG00000009335	-	76	93.631	ENSLACG00000016974	RAB11B	91	93.631	Latimeria_chalumnae
ENSPMAG00000009335	-	100	80.952	ENSLAFG00000013598	RAB11B	94	80.952	Loxodonta_africana
ENSPMAG00000009335	-	100	80.952	ENSMNEG00000039759	-	94	80.952	Macaca_nemestrina
ENSPMAG00000009335	-	100	79.048	ENSMAMG00000018556	rab11ba	97	79.048	Mastacembelus_armatus
ENSPMAG00000009335	-	100	79.048	ENSMZEG00005010947	rab11ba	94	79.048	Maylandia_zebra
ENSPMAG00000009335	-	99	72.249	ENSMZEG00005019251	-	91	72.249	Maylandia_zebra
ENSPMAG00000009335	-	100	80.476	ENSMAUG00000021579	Rab11b	94	80.476	Mesocricetus_auratus
ENSPMAG00000009335	-	100	81.429	ENSMOCG00000012667	Rab11b	94	81.429	Microtus_ochrogaster
ENSPMAG00000009335	-	100	78.095	ENSMALG00000021949	rab11ba	94	78.095	Monopterus_albus
ENSPMAG00000009335	-	100	80.952	MGP_CAROLIEiJ_G0021415	Rab11b	89	96.970	Mus_caroli
ENSPMAG00000009335	-	100	80.000	ENSMUSG00000077450	Rab11b	89	96.970	Mus_musculus
ENSPMAG00000009335	-	100	80.952	MGP_PahariEiJ_G0020420	Rab11b	94	80.952	Mus_pahari
ENSPMAG00000009335	-	100	80.952	MGP_SPRETEiJ_G0022327	Rab11b	89	96.970	Mus_spretus
ENSPMAG00000009335	-	100	81.429	ENSMPUG00000007263	RAB11B	94	81.429	Mustela_putorius_furo
ENSPMAG00000009335	-	100	76.995	ENSMLUG00000002308	-	94	76.995	Myotis_lucifugus
ENSPMAG00000009335	-	100	80.952	ENSNGAG00000015757	Rab11b	94	80.952	Nannospalax_galili
ENSPMAG00000009335	-	100	79.524	ENSNBRG00000023898	rab11ba	79	79.524	Neolamprologus_brichardi
ENSPMAG00000009335	-	100	80.952	ENSNLEG00000001733	RAB11B	98	80.952	Nomascus_leucogenys
ENSPMAG00000009335	-	100	80.952	ENSODEG00000011371	RAB11B	94	80.952	Octodon_degus
ENSPMAG00000009335	-	100	80.000	ENSONIG00000002535	rab11ba	94	80.000	Oreochromis_niloticus
ENSPMAG00000009335	-	76	94.268	ENSOCUG00000028208	RAB11B	67	86.857	Oryctolagus_cuniculus
ENSPMAG00000009335	-	99	80.383	ENSORLG00000015307	rab11ba	94	80.383	Oryzias_latipes
ENSPMAG00000009335	-	99	80.383	ENSORLG00020020816	rab11ba	94	80.383	Oryzias_latipes_hni
ENSPMAG00000009335	-	99	80.769	ENSORLG00015016946	rab11ba	76	80.769	Oryzias_latipes_hsok
ENSPMAG00000009335	-	99	80.769	ENSOMEG00000002581	rab11ba	94	80.383	Oryzias_melastigma
ENSPMAG00000009335	-	100	80.952	ENSOGAG00000003227	RAB11B	93	80.952	Otolemur_garnettii
ENSPMAG00000009335	-	100	80.952	ENSOARG00000003801	RAB11B	91	80.952	Ovis_aries
ENSPMAG00000009335	-	82	88.757	ENSPPRG00000010160	RAB11B	83	88.757	Panthera_pardus
ENSPMAG00000009335	-	100	80.952	ENSPEMG00000014536	Rab11b	94	80.952	Peromyscus_maniculatus_bairdii
ENSPMAG00000009335	-	100	80.000	ENSPFOG00000006159	rab11ba	94	80.000	Poecilia_formosa
ENSPMAG00000009335	-	100	80.000	ENSPLAG00000014243	rab11ba	94	80.000	Poecilia_latipinna
ENSPMAG00000009335	-	100	80.000	ENSPMEG00000007917	rab11ba	71	80.000	Poecilia_mexicana
ENSPMAG00000009335	-	100	80.000	ENSPREG00000006357	rab11ba	73	80.000	Poecilia_reticulata
ENSPMAG00000009335	-	100	80.952	ENSPPYG00000009504	RAB11B	94	80.952	Pongo_abelii
ENSPMAG00000009335	-	100	72.857	ENSPCAG00000016118	RAB11B	94	72.857	Procavia_capensis
ENSPMAG00000009335	-	100	80.952	ENSPCOG00000028053	RAB11B	86	94.268	Propithecus_coquereli
ENSPMAG00000009335	-	64	93.985	ENSPCOG00000008655	-	91	93.985	Propithecus_coquereli
ENSPMAG00000009335	-	100	80.952	ENSPVAG00000009645	RAB11B	94	80.952	Pteropus_vampyrus
ENSPMAG00000009335	-	100	79.048	ENSPNYG00000019644	rab11ba	94	79.048	Pundamilia_nyererei
ENSPMAG00000009335	-	82	72.674	ENSPNYG00000023810	-	74	72.674	Pundamilia_nyererei
ENSPMAG00000009335	-	100	80.476	ENSPNAG00000006431	-	94	80.476	Pygocentrus_nattereri
ENSPMAG00000009335	-	100	80.000	ENSPNAG00000020475	rab11ba	94	80.000	Pygocentrus_nattereri
ENSPMAG00000009335	-	100	80.952	ENSRNOG00000007648	Rab11b	94	80.952	Rattus_norvegicus
ENSPMAG00000009335	-	100	80.952	ENSSBOG00000035094	RAB11B	88	94.268	Saimiri_boliviensis_boliviensis
ENSPMAG00000009335	-	100	80.000	ENSSDUG00000002965	rab11ba	96	80.000	Seriola_dumerili
ENSPMAG00000009335	-	100	80.000	ENSSLDG00000005221	rab11ba	94	80.000	Seriola_lalandi_dorsalis
ENSPMAG00000009335	-	100	80.000	ENSSPAG00000017313	rab11ba	94	80.000	Stegastes_partitus
ENSPMAG00000009335	-	100	80.952	ENSSSCG00000013600	RAB11B	94	80.952	Sus_scrofa
ENSPMAG00000009335	-	62	97.674	ENSTBEG00000014750	-	100	97.674	Tupaia_belangeri
ENSPMAG00000009335	-	100	80.952	ENSTTRG00000009758	RAB11B	94	80.952	Tursiops_truncatus
ENSPMAG00000009335	-	99	69.856	ENSUMAG00000014594	RAB11B	97	69.856	Ursus_maritimus
ENSPMAG00000009335	-	100	80.952	ENSVVUG00000025210	RAB11B	94	80.952	Vulpes_vulpes
ENSPMAG00000009335	-	100	79.048	ENSXETG00000021890	rab11b.2	93	79.048	Xenopus_tropicalis
ENSPMAG00000009335	-	58	96.667	ENSXCOG00000009194	-	88	96.667	Xiphophorus_couchianus
ENSPMAG00000009335	-	100	79.524	ENSXMAG00000013416	rab11ba	94	79.524	Xiphophorus_maculatus