EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSPMAG00000009352 (Gene tree)
Gene ID: -
Gene Symbol: -
Alias: -
Full Name: -
Gene Type: protein_coding
Species: Petromyzon_marinus
Status: putative
Strand: Minus strand
Length: 11607 bases
Position: chrGL483111:3622-15228
Accession: -
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSPMAP00000010281	RRM_1	PF00076.22	1.4e-17	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSPMAT00000010327	-	1044	-	ENSPMAP00000010281	294 (aa)	-	S4RYJ0

Gene Model

Click here to download ENSPMAG00000009352's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSPMAG00000009352's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSPMAG00000009352	-	82	37.603	ENSPMAG00000004544	zgc:123010	80	38.938

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSPMAG00000009352	-	80	40.171	ENSAPOG00000001034	-	56	40.171	Acanthochromis_polyacanthus
ENSPMAG00000009352	-	82	43.033	ENSAPOG00000019633	zgc:123010	51	43.033	Acanthochromis_polyacanthus
ENSPMAG00000009352	-	81	43.515	ENSACIG00000021684	zgc:123010	61	43.515	Amphilophus_citrinellus
ENSPMAG00000009352	-	82	42.623	ENSAPEG00000014305	zgc:123010	50	42.623	Amphiprion_percula
ENSPMAG00000009352	-	70	38.318	ENSAPLG00000013566	-	98	38.318	Anas_platyrhynchos
ENSPMAG00000009352	-	94	39.068	ENSDARG00000039082	zgc:123010	53	40.234	Danio_rerio
ENSPMAG00000009352	-	91	42.391	ENSELUG00000022008	zgc:123010	57	40.664	Esox_lucius
ENSPMAG00000009352	-	84	32.847	ENSELUG00000002009	si:dkey-33c12.4	72	34.413	Esox_lucius
ENSPMAG00000009352	-	76	31.890	ENSFALG00000008867	-	97	31.890	Ficedula_albicollis
ENSPMAG00000009352	-	81	40.000	ENSGMOG00000018473	zgc:123010	65	40.000	Gadus_morhua
ENSPMAG00000009352	-	60	37.853	ENSGMOG00000001292	-	70	37.853	Gadus_morhua
ENSPMAG00000009352	-	83	33.214	ENSGALG00000036747	TTC31	50	33.840	Gallus_gallus
ENSPMAG00000009352	-	79	41.949	ENSGACG00000007620	zgc:123010	65	40.984	Gasterosteus_aculeatus
ENSPMAG00000009352	-	76	44.000	ENSGACG00000004936	-	71	44.000	Gasterosteus_aculeatus
ENSPMAG00000009352	-	81	45.570	ENSKMAG00000006468	-	51	30.744	Kryptolebias_marmoratus
ENSPMAG00000009352	-	86	43.254	ENSLACG00000009001	zgc:123010	50	45.333	Latimeria_chalumnae
ENSPMAG00000009352	-	86	40.873	ENSMAMG00000001145	zgc:123010	57	42.128	Mastacembelus_armatus
ENSPMAG00000009352	-	77	41.410	ENSMAMG00000003439	-	63	41.410	Mastacembelus_armatus
ENSPMAG00000009352	-	89	38.889	ENSMAMG00000002460	-	55	41.593	Mastacembelus_armatus
ENSPMAG00000009352	-	89	39.259	ENSMAMG00000002377	-	53	42.035	Mastacembelus_armatus
ENSPMAG00000009352	-	77	42.035	ENSMAMG00000003394	-	62	42.035	Mastacembelus_armatus
ENSPMAG00000009352	-	80	42.308	ENSMZEG00005014740	-	58	42.308	Maylandia_zebra
ENSPMAG00000009352	-	72	42.601	ENSMMOG00000017955	-	55	42.601	Mola_mola
ENSPMAG00000009352	-	79	40.426	ENSNBRG00000021157	zgc:123010	51	40.426	Neolamprologus_brichardi
ENSPMAG00000009352	-	81	43.503	ENSONIG00000007538	-	92	42.259	Oreochromis_niloticus
ENSPMAG00000009352	-	81	39.754	ENSONIG00000018353	zgc:123010	50	39.754	Oreochromis_niloticus
ENSPMAG00000009352	-	76	42.411	ENSONIG00000012263	-	72	42.411	Oreochromis_niloticus
ENSPMAG00000009352	-	73	43.256	ENSONIG00000000297	-	72	43.256	Oreochromis_niloticus
ENSPMAG00000009352	-	80	42.259	ENSORLG00000007675	zgc:123010	50	42.373	Oryzias_latipes
ENSPMAG00000009352	-	81	42.083	ENSORLG00020003457	zgc:123010	51	42.083	Oryzias_latipes_hni
ENSPMAG00000009352	-	79	42.857	ENSPKIG00000015521	zgc:123010	52	42.857	Paramormyrops_kingsleyae
ENSPMAG00000009352	-	81	37.815	ENSPMGG00000020251	zgc:123010	54	37.815	Periophthalmus_magnuspinnatus
ENSPMAG00000009352	-	74	44.521	ENSPFOG00000017092	-	57	40.845	Poecilia_formosa
ENSPMAG00000009352	-	77	41.991	ENSPREG00000019587	zgc:123010	51	42.291	Poecilia_reticulata
ENSPMAG00000009352	-	82	38.431	ENSPNYG00000023304	-	57	40.249	Pundamilia_nyererei
ENSPMAG00000009352	-	99	38.305	ENSPNAG00000007579	zgc:123010	50	40.467	Pygocentrus_nattereri
ENSPMAG00000009352	-	82	42.213	ENSSMAG00000002904	zgc:123010	51	42.213	Scophthalmus_maximus
ENSPMAG00000009352	-	74	46.575	ENSSLDG00000012846	-	51	35.211	Seriola_lalandi_dorsalis
ENSPMAG00000009352	-	76	37.054	ENSTNIG00000001154	-	93	37.054	Tetraodon_nigroviridis
ENSPMAG00000009352	-	86	40.079	ENSTNIG00000010542	-	76	42.105	Tetraodon_nigroviridis
ENSPMAG00000009352	-	94	38.214	ENSTNIG00000001303	zgc:123010	76	40.157	Tetraodon_nigroviridis
ENSPMAG00000009352	-	73	46.759	ENSXETG00000033896	-	79	44.934	Xenopus_tropicalis
ENSPMAG00000009352	-	79	40.891	ENSXCOG00000012281	zgc:123010	57	40.891	Xiphophorus_couchianus
ENSPMAG00000009352	-	82	42.213	ENSXMAG00000002598	zgc:123010	52	42.213	Xiphophorus_maculatus