EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSPMAG00000009355 (Gene tree)
Gene ID: -
Gene Symbol: slirp
Alias: -
Full Name: SRA stem-loop interacting RNA binding protein
Gene Type: protein_coding
Species: Petromyzon_marinus
Status: putative
Strand: Minus strand
Length: 3131 bases
Position: chrGL481654:16797-19927
Accession: ZDB-GENE-030729-30
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSPMAP00000010284	RRM_1	PF00076.22	8.6e-09	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSPMAT00000010330	-	270	-	ENSPMAP00000010284	90 (aa)	-	S4RYJ3

Gene Model

Click here to download ENSPMAG00000009355's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSPMAG00000009355's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSPMAG00000009355	slirp	76	50.000	ENSG00000119705	SLIRP	79	53.333	Homo_sapiens
ENSPMAG00000009355	slirp	94	52.941	ENSAPOG00000001298	slirp	85	52.941	Acanthochromis_polyacanthus
ENSPMAG00000009355	slirp	70	46.032	ENSAMEG00000003975	SLIRP	69	46.032	Ailuropoda_melanoleuca
ENSPMAG00000009355	slirp	88	55.696	ENSACIG00000023083	slirp	78	55.696	Amphilophus_citrinellus
ENSPMAG00000009355	slirp	93	53.571	ENSAOCG00000006342	slirp	85	53.571	Amphiprion_ocellaris
ENSPMAG00000009355	slirp	93	53.571	ENSAPEG00000015917	slirp	85	53.571	Amphiprion_percula
ENSPMAG00000009355	slirp	93	53.571	ENSAPEG00000015719	-	86	53.571	Amphiprion_percula
ENSPMAG00000009355	slirp	94	52.941	ENSATEG00000013525	slirp	85	52.941	Anabas_testudineus
ENSPMAG00000009355	slirp	94	54.118	ENSAMXG00000018693	slirp	85	54.118	Astyanax_mexicanus
ENSPMAG00000009355	slirp	76	50.000	ENSCJAG00000016946	SLIRP	65	51.667	Callithrix_jacchus
ENSPMAG00000009355	slirp	76	48.529	ENSCAFG00020015876	-	61	48.529	Canis_lupus_dingo
ENSPMAG00000009355	slirp	76	50.000	ENSCCAG00000030130	SLIRP	63	50.000	Cebus_capucinus
ENSPMAG00000009355	slirp	76	50.000	ENSCATG00000036327	SLIRP	65	53.333	Cercocebus_atys
ENSPMAG00000009355	slirp	76	48.529	ENSCSAG00000011736	SLIRP	62	48.529	Chlorocebus_sabaeus
ENSPMAG00000009355	slirp	83	50.667	ENSCPBG00000026327	SLIRP	76	50.667	Chrysemys_picta_bellii
ENSPMAG00000009355	slirp	67	55.000	ENSCANG00000032892	SLIRP	61	55.000	Colobus_angolensis_palliatus
ENSPMAG00000009355	slirp	80	46.753	ENSCGRG00001024068	Slirp	69	46.753	Cricetulus_griseus_chok1gshd
ENSPMAG00000009355	slirp	80	46.753	ENSCGRG00000017440	Slirp	69	46.753	Cricetulus_griseus_crigri
ENSPMAG00000009355	slirp	100	42.391	ENSCSEG00000015766	slirp	94	42.391	Cynoglossus_semilaevis
ENSPMAG00000009355	slirp	91	47.561	ENSCVAG00000012504	slirp	81	47.561	Cyprinodon_variegatus
ENSPMAG00000009355	slirp	89	53.750	ENSDARG00000097753	slirp	77	54.430	Danio_rerio
ENSPMAG00000009355	slirp	76	48.529	ENSDNOG00000007721	SLIRP	62	48.529	Dasypus_novemcinctus
ENSPMAG00000009355	slirp	74	50.746	ENSDORG00000012379	Slirp	60	50.746	Dipodomys_ordii
ENSPMAG00000009355	slirp	74	56.716	ENSETEG00000010345	SLIRP	62	56.716	Echinops_telfairi
ENSPMAG00000009355	slirp	76	54.412	ENSEASG00005020193	SLIRP	61	54.412	Equus_asinus_asinus
ENSPMAG00000009355	slirp	70	53.968	ENSEEUG00000007257	SLIRP	62	53.968	Erinaceus_europaeus
ENSPMAG00000009355	slirp	94	49.412	ENSELUG00000016800	slirp	84	49.412	Esox_lucius
ENSPMAG00000009355	slirp	67	55.000	ENSFCAG00000036326	SLIRP	61	55.000	Felis_catus
ENSPMAG00000009355	slirp	71	46.875	ENSFALG00000012583	SLIRP	60	46.875	Ficedula_albicollis
ENSPMAG00000009355	slirp	76	55.882	ENSFDAG00000008347	SLIRP	60	55.882	Fukomys_damarensis
ENSPMAG00000009355	slirp	69	58.065	ENSFHEG00000004709	slirp	67	58.065	Fundulus_heteroclitus
ENSPMAG00000009355	slirp	88	51.899	ENSGMOG00000016948	slirp	76	51.899	Gadus_morhua
ENSPMAG00000009355	slirp	93	46.429	ENSGALG00000031238	SLIRP	83	45.122	Gallus_gallus
ENSPMAG00000009355	slirp	94	49.412	ENSGAFG00000010998	slirp	85	49.412	Gambusia_affinis
ENSPMAG00000009355	slirp	83	50.667	ENSGACG00000020137	slirp	87	50.667	Gasterosteus_aculeatus
ENSPMAG00000009355	slirp	92	51.765	ENSGAGG00000009953	SLIRP	59	51.765	Gopherus_agassizii
ENSPMAG00000009355	slirp	76	50.000	ENSGGOG00000011059	-	65	53.333	Gorilla_gorilla
ENSPMAG00000009355	slirp	76	51.471	ENSHGLG00000018491	SLIRP	61	51.471	Heterocephalus_glaber_female
ENSPMAG00000009355	slirp	76	51.471	ENSHGLG00100014153	SLIRP	61	51.471	Heterocephalus_glaber_male
ENSPMAG00000009355	slirp	94	49.412	ENSHCOG00000006795	slirp	86	49.412	Hippocampus_comes
ENSPMAG00000009355	slirp	94	51.765	ENSIPUG00000010214	SLIRP	85	51.765	Ictalurus_punctatus
ENSPMAG00000009355	slirp	74	50.746	ENSSTOG00000034316	SLIRP	60	50.746	Ictidomys_tridecemlineatus
ENSPMAG00000009355	slirp	93	52.381	ENSKMAG00000002038	slirp	81	52.381	Kryptolebias_marmoratus
ENSPMAG00000009355	slirp	100	44.444	ENSLBEG00000007564	slirp	90	44.444	Labrus_bergylta
ENSPMAG00000009355	slirp	94	49.412	ENSLACG00000013434	SLIRP	82	49.412	Latimeria_chalumnae
ENSPMAG00000009355	slirp	76	48.529	ENSMFAG00000042960	SLIRP	65	53.333	Macaca_fascicularis
ENSPMAG00000009355	slirp	79	46.479	ENSMMUG00000029256	SLIRP	65	53.333	Macaca_mulatta
ENSPMAG00000009355	slirp	76	48.529	ENSMNEG00000028921	SLIRP	65	53.333	Macaca_nemestrina
ENSPMAG00000009355	slirp	67	53.333	ENSMLEG00000043644	SLIRP	61	53.333	Mandrillus_leucophaeus
ENSPMAG00000009355	slirp	88	58.228	ENSMZEG00005004617	slirp	80	58.228	Maylandia_zebra
ENSPMAG00000009355	slirp	76	47.059	ENSMAUG00000003857	Slirp	61	47.059	Mesocricetus_auratus
ENSPMAG00000009355	slirp	70	50.794	ENSMICG00000012080	SLIRP	59	50.794	Microcebus_murinus
ENSPMAG00000009355	slirp	74	49.254	ENSMOCG00000016019	Slirp	64	49.231	Microtus_ochrogaster
ENSPMAG00000009355	slirp	88	54.430	ENSMMOG00000018268	slirp	79	54.430	Mola_mola
ENSPMAG00000009355	slirp	68	59.016	ENSMODG00000005207	-	86	59.016	Monodelphis_domestica
ENSPMAG00000009355	slirp	88	50.633	ENSMALG00000012581	slirp	81	50.633	Monopterus_albus
ENSPMAG00000009355	slirp	76	44.118	MGP_CAROLIEiJ_G0017995	Slirp	63	44.118	Mus_caroli
ENSPMAG00000009355	slirp	76	45.588	ENSMUSG00000021040	Slirp	64	46.032	Mus_musculus
ENSPMAG00000009355	slirp	76	45.588	MGP_SPRETEiJ_G0018840	Slirp	61	45.588	Mus_spretus
ENSPMAG00000009355	slirp	76	51.471	ENSMLUG00000024998	-	60	52.239	Myotis_lucifugus
ENSPMAG00000009355	slirp	76	52.941	ENSMLUG00000029544	-	61	52.941	Myotis_lucifugus
ENSPMAG00000009355	slirp	76	51.471	ENSNGAG00000016363	Slirp	65	51.471	Nannospalax_galili
ENSPMAG00000009355	slirp	73	50.000	ENSNLEG00000027238	-	70	51.667	Nomascus_leucogenys
ENSPMAG00000009355	slirp	76	48.529	ENSNLEG00000032459	-	65	50.000	Nomascus_leucogenys
ENSPMAG00000009355	slirp	76	51.471	ENSODEG00000012580	SLIRP	68	52.381	Octodon_degus
ENSPMAG00000009355	slirp	88	58.228	ENSONIG00000011692	slirp	80	58.228	Oreochromis_niloticus
ENSPMAG00000009355	slirp	71	59.375	ENSOANG00000022366	SLIRP	58	59.375	Ornithorhynchus_anatinus
ENSPMAG00000009355	slirp	94	54.118	ENSORLG00000010761	slirp	66	54.118	Oryzias_latipes
ENSPMAG00000009355	slirp	94	55.294	ENSORLG00020022188	slirp	85	55.294	Oryzias_latipes_hni
ENSPMAG00000009355	slirp	88	55.696	ENSORLG00015020171	slirp	78	55.696	Oryzias_latipes_hsok
ENSPMAG00000009355	slirp	94	51.765	ENSOMEG00000019321	slirp	85	51.765	Oryzias_melastigma
ENSPMAG00000009355	slirp	76	50.000	ENSPPAG00000040710	-	65	53.333	Pan_paniscus
ENSPMAG00000009355	slirp	67	55.000	ENSPPRG00000014350	SLIRP	61	55.000	Panthera_pardus
ENSPMAG00000009355	slirp	67	55.000	ENSPTIG00000014196	SLIRP	61	55.000	Panthera_tigris_altaica
ENSPMAG00000009355	slirp	76	50.000	ENSPTRG00000030691	SLIRP	65	53.333	Pan_troglodytes
ENSPMAG00000009355	slirp	76	48.529	ENSPANG00000026323	SLIRP	65	53.333	Papio_anubis
ENSPMAG00000009355	slirp	70	60.317	ENSPKIG00000008831	slirp	62	60.317	Paramormyrops_kingsleyae
ENSPMAG00000009355	slirp	88	54.430	ENSPMGG00000010541	slirp	91	54.430	Periophthalmus_magnuspinnatus
ENSPMAG00000009355	slirp	76	47.059	ENSPEMG00000013234	Slirp	65	46.970	Peromyscus_maniculatus_bairdii
ENSPMAG00000009355	slirp	68	59.016	ENSPCIG00000026842	-	66	59.016	Phascolarctos_cinereus
ENSPMAG00000009355	slirp	94	52.941	ENSPFOG00000006758	slirp	85	52.941	Poecilia_formosa
ENSPMAG00000009355	slirp	94	52.941	ENSPLAG00000011140	slirp	85	52.941	Poecilia_latipinna
ENSPMAG00000009355	slirp	94	52.941	ENSPMEG00000019535	slirp	85	52.941	Poecilia_mexicana
ENSPMAG00000009355	slirp	94	52.941	ENSPREG00000011673	slirp	85	52.941	Poecilia_reticulata
ENSPMAG00000009355	slirp	76	51.471	ENSPPYG00000006030	SLIRP	62	51.471	Pongo_abelii
ENSPMAG00000009355	slirp	80	45.833	ENSPCOG00000015159	SLIRP	59	50.794	Propithecus_coquereli
ENSPMAG00000009355	slirp	94	55.294	ENSPNAG00000008633	slirp	86	55.294	Pygocentrus_nattereri
ENSPMAG00000009355	slirp	67	51.667	ENSRBIG00000032998	-	55	51.667	Rhinopithecus_bieti
ENSPMAG00000009355	slirp	64	51.724	ENSRBIG00000031396	-	58	51.724	Rhinopithecus_bieti
ENSPMAG00000009355	slirp	76	50.000	ENSRBIG00000032222	-	65	53.333	Rhinopithecus_bieti
ENSPMAG00000009355	slirp	76	45.588	ENSRBIG00000035817	-	62	45.588	Rhinopithecus_bieti
ENSPMAG00000009355	slirp	64	53.448	ENSRROG00000035604	-	58	53.448	Rhinopithecus_roxellana
ENSPMAG00000009355	slirp	71	51.562	ENSRROG00000041312	-	63	51.562	Rhinopithecus_roxellana
ENSPMAG00000009355	slirp	70	50.794	ENSRROG00000017133	-	66	50.794	Rhinopithecus_roxellana
ENSPMAG00000009355	slirp	76	50.000	ENSRROG00000036656	-	65	53.333	Rhinopithecus_roxellana
ENSPMAG00000009355	slirp	67	53.333	ENSSBOG00000020014	SLIRP	65	53.333	Saimiri_boliviensis_boliviensis
ENSPMAG00000009355	slirp	94	48.235	ENSSFOG00015011165	slirp	86	48.235	Scleropages_formosus
ENSPMAG00000009355	slirp	98	38.636	ENSSMAG00000012930	slirp	86	38.636	Scophthalmus_maximus
ENSPMAG00000009355	slirp	94	52.941	ENSSDUG00000021883	slirp	56	52.941	Seriola_dumerili
ENSPMAG00000009355	slirp	97	51.724	ENSSLDG00000023136	slirp	79	51.724	Seriola_lalandi_dorsalis
ENSPMAG00000009355	slirp	87	53.846	ENSSPUG00000009346	SLIRP	80	53.846	Sphenodon_punctatus
ENSPMAG00000009355	slirp	94	52.941	ENSSPAG00000013477	slirp	85	52.941	Stegastes_partitus
ENSPMAG00000009355	slirp	74	52.239	ENSSSCG00000028167	SLIRP	60	52.239	Sus_scrofa
ENSPMAG00000009355	slirp	84	44.737	ENSTGUG00000012337	SLIRP	60	50.000	Taeniopygia_guttata
ENSPMAG00000009355	slirp	97	47.727	ENSTRUG00000020127	slirp	87	47.727	Takifugu_rubripes
ENSPMAG00000009355	slirp	76	50.000	ENSUAMG00000022445	SLIRP	61	50.000	Ursus_americanus
ENSPMAG00000009355	slirp	76	50.000	ENSUMAG00000007166	SLIRP	61	50.000	Ursus_maritimus
ENSPMAG00000009355	slirp	79	47.945	ENSVPAG00000001781	SLIRP	68	47.945	Vicugna_pacos
ENSPMAG00000009355	slirp	76	48.529	ENSVVUG00000004436	SLIRP	61	48.529	Vulpes_vulpes
ENSPMAG00000009355	slirp	90	50.617	ENSXETG00000030343	SLIRP	91	50.617	Xenopus_tropicalis
ENSPMAG00000009355	slirp	94	52.941	ENSXCOG00000009422	slirp	85	52.941	Xiphophorus_couchianus
ENSPMAG00000009355	slirp	94	51.765	ENSXMAG00000015655	slirp	85	51.765	Xiphophorus_maculatus