EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSPMAG00000009397 (Gene tree)
Gene ID: -
Gene Symbol: srsf4 (1 of many)
Alias: -
Full Name: serine/arginine-rich splicing factor 4
Gene Type: protein_coding
Species: Petromyzon_marinus
Status: putative
Strand: Minus strand
Length: 8424 bases
Position: chrGL481287:28-8451
Accession: ZDB-GENE-030131-591
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSPMAP00000010331	RRM_1	PF00076.22	1.2e-28	1	2
ENSPMAP00000010331	RRM_1	PF00076.22	1.2e-28	2	2

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSPMAT00000010377	-	795	-	ENSPMAP00000010331	265 (aa)	-	S4RYP0

Gene Model

Click here to download ENSPMAG00000009397's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSPMAG00000009397's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSPMAG00000009397	srsf4	67	55.789	ENSPMAG00000007790	srsf5b	90	47.955

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSPMAG00000009397	srsf4	89	55.859	ENSG00000116350	SRSF4	51	73.913	Homo_sapiens
ENSPMAG00000009397	srsf4	68	63.388	ENSAPOG00000023399	-	60	63.536	Acanthochromis_polyacanthus
ENSPMAG00000009397	srsf4	68	68.132	ENSACIG00000018649	srsf4	90	65.354	Amphilophus_citrinellus
ENSPMAG00000009397	srsf4	62	64.881	ENSAOCG00000005997	srsf4	92	65.476	Amphiprion_ocellaris
ENSPMAG00000009397	srsf4	68	69.231	ENSACLG00000021269	-	50	66.851	Astatotilapia_calliptera
ENSPMAG00000009397	srsf4	68	69.022	ENSACLG00000003395	srsf4	63	72.368	Astatotilapia_calliptera
ENSPMAG00000009397	srsf4	68	64.286	ENSAMXG00000034811	srsf4	75	68.421	Astyanax_mexicanus
ENSPMAG00000009397	srsf4	67	46.465	WBGene00004698	rsp-1	97	52.083	Caenorhabditis_elegans
ENSPMAG00000009397	srsf4	67	48.731	ENSCING00000020631	-	79	51.309	Ciona_intestinalis
ENSPMAG00000009397	srsf4	66	51.832	ENSCING00000024718	-	56	50.785	Ciona_intestinalis
ENSPMAG00000009397	srsf4	66	50.000	ENSCING00000011362	-	65	48.370	Ciona_intestinalis
ENSPMAG00000009397	srsf4	68	52.500	ENSCING00000012370	-	67	54.315	Ciona_intestinalis
ENSPMAG00000009397	srsf4	94	55.513	ENSCSAVG00000002581	-	69	55.738	Ciona_savignyi
ENSPMAG00000009397	srsf4	68	63.934	ENSDARG00000105293	srsf4	72	67.105	Danio_rerio
ENSPMAG00000009397	srsf4	67	56.284	FBgn0004587	B52	95	54.688	Drosophila_melanogaster
ENSPMAG00000009397	srsf4	60	62.733	ENSEBUG00000003129	srsf4	68	60.759	Eptatretus_burgeri
ENSPMAG00000009397	srsf4	82	50.000	ENSEBUG00000001681	srsf4	67	55.249	Eptatretus_burgeri
ENSPMAG00000009397	srsf4	85	55.319	ENSELUG00000017551	srsf4	93	62.308	Esox_lucius
ENSPMAG00000009397	srsf4	68	64.674	ENSFHEG00000007472	srsf4	82	71.053	Fundulus_heteroclitus
ENSPMAG00000009397	srsf4	68	63.187	ENSGMOG00000012906	srsf4	56	62.983	Gadus_morhua
ENSPMAG00000009397	srsf4	91	51.538	ENSGAFG00000018496	srsf4	64	59.116	Gambusia_affinis
ENSPMAG00000009397	srsf4	68	63.978	ENSGACG00000002389	srsf4	55	63.536	Gasterosteus_aculeatus
ENSPMAG00000009397	srsf4	68	69.231	ENSHBUG00000011326	-	63	61.333	Haplochromis_burtoni
ENSPMAG00000009397	srsf4	68	66.484	ENSHCOG00000012540	srsf4	100	57.196	Hippocampus_comes
ENSPMAG00000009397	srsf4	68	65.775	ENSKMAG00000013631	srsf4	80	55.502	Kryptolebias_marmoratus
ENSPMAG00000009397	srsf4	89	58.300	ENSMAMG00000004888	srsf4	70	63.780	Mastacembelus_armatus
ENSPMAG00000009397	srsf4	68	69.022	ENSMZEG00005026275	srsf4	63	72.368	Maylandia_zebra
ENSPMAG00000009397	srsf4	93	55.906	ENSMMOG00000013653	srsf4	64	59.116	Mola_mola
ENSPMAG00000009397	srsf4	68	63.441	ENSMODG00000011052	SRSF4	54	62.431	Monodelphis_domestica
ENSPMAG00000009397	srsf4	68	65.217	ENSMALG00000013392	srsf4	65	63.536	Monopterus_albus
ENSPMAG00000009397	srsf4	68	56.593	ENSNLEG00000030787	-	56	56.354	Nomascus_leucogenys
ENSPMAG00000009397	srsf4	68	65.934	ENSORLG00020016052	srsf4	65	66.298	Oryzias_latipes_hni
ENSPMAG00000009397	srsf4	68	65.934	ENSORLG00015007566	srsf4	69	66.298	Oryzias_latipes_hsok
ENSPMAG00000009397	srsf4	68	64.835	ENSOMEG00000005541	srsf4	50	66.298	Oryzias_melastigma
ENSPMAG00000009397	srsf4	68	68.984	ENSPMGG00000013436	srsf4	95	65.354	Periophthalmus_magnuspinnatus
ENSPMAG00000009397	srsf4	68	65.241	ENSPLAG00000008812	srsf4	63	58.011	Poecilia_latipinna
ENSPMAG00000009397	srsf4	68	67.582	ENSPNYG00000003796	srsf4	55	67.956	Pundamilia_nyererei
ENSPMAG00000009397	srsf4	67	63.536	ENSPNAG00000023844	srsf4	53	63.536	Pygocentrus_nattereri
ENSPMAG00000009397	srsf4	69	62.903	ENSSFOG00015020292	srsf4	82	59.167	Scleropages_formosus
ENSPMAG00000009397	srsf4	68	64.516	ENSSMAG00000001707	srsf4	70	54.212	Scophthalmus_maximus
ENSPMAG00000009397	srsf4	68	64.286	ENSSDUG00000007387	srsf4	53	65.193	Seriola_dumerili
ENSPMAG00000009397	srsf4	68	55.080	ENSSLDG00000009745	srsf4	60	54.396	Seriola_lalandi_dorsalis
ENSPMAG00000009397	srsf4	86	60.684	ENSSPAG00000014538	srsf4	83	63.780	Stegastes_partitus
ENSPMAG00000009397	srsf4	68	65.241	ENSXCOG00000018826	srsf4	89	60.833	Xiphophorus_couchianus
ENSPMAG00000009397	srsf4	68	61.497	ENSXCOG00000003212	-	78	54.478	Xiphophorus_couchianus