EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSPMAG00000009561 (Gene tree)
Gene ID: -
Gene Symbol: utp6
Alias: -
Full Name: UTP6%2C small subunit (SSU) processome component%2C homolog (yeast)
Gene Type: protein_coding
Species: Petromyzon_marinus
Status: putative
Strand: Plus strand
Length: 14909 bases
Position: chrGL477073:577575-592483
Accession: ZDB-GENE-040426-769
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSPMAP00000010515	U3_assoc_6	PF08640.11	5.4e-08	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSPMAT00000010561	-	1692	-	ENSPMAP00000010515	564 (aa)	-	S4RZ74

Gene Model

Click here to download ENSPMAG00000009561's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSPMAG00000009561's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSPMAG00000009561	utp6	100	45.789	ENSG00000108651	UTP6	93	45.789	Homo_sapiens
ENSPMAG00000009561	utp6	100	45.213	ENSAPOG00000000435	utp6	93	45.213	Acanthochromis_polyacanthus
ENSPMAG00000009561	utp6	99	46.619	ENSAMEG00000005443	UTP6	92	46.619	Ailuropoda_melanoleuca
ENSPMAG00000009561	utp6	100	43.085	ENSACIG00000004124	utp6	93	43.085	Amphilophus_citrinellus
ENSPMAG00000009561	utp6	100	44.858	ENSAOCG00000016812	utp6	93	44.858	Amphiprion_ocellaris
ENSPMAG00000009561	utp6	100	44.681	ENSAPEG00000023565	utp6	93	44.681	Amphiprion_percula
ENSPMAG00000009561	utp6	100	44.681	ENSATEG00000003401	utp6	93	44.681	Anabas_testudineus
ENSPMAG00000009561	utp6	100	48.404	ENSAPLG00000005821	UTP6	93	48.404	Anas_platyrhynchos
ENSPMAG00000009561	utp6	100	47.695	ENSACAG00000009472	UTP6	93	47.695	Anolis_carolinensis
ENSPMAG00000009561	utp6	100	45.088	ENSANAG00000034603	UTP6	93	45.088	Aotus_nancymaae
ENSPMAG00000009561	utp6	100	45.567	ENSACLG00000006728	utp6	93	45.567	Astatotilapia_calliptera
ENSPMAG00000009561	utp6	100	46.195	ENSAMXG00000009478	utp6	93	46.195	Astyanax_mexicanus
ENSPMAG00000009561	utp6	100	42.958	ENSBTAG00000003769	-	91	42.958	Bos_taurus
ENSPMAG00000009561	utp6	100	44.149	ENSBTAG00000015612	UTP6	93	44.149	Bos_taurus
ENSPMAG00000009561	utp6	100	45.439	ENSCJAG00000014115	UTP6	93	45.439	Callithrix_jacchus
ENSPMAG00000009561	utp6	100	46.277	ENSCAFG00000018507	UTP6	93	46.277	Canis_familiaris
ENSPMAG00000009561	utp6	100	46.277	ENSCAFG00020014678	UTP6	93	46.277	Canis_lupus_dingo
ENSPMAG00000009561	utp6	100	44.504	ENSCHIG00000009726	-	93	44.504	Capra_hircus
ENSPMAG00000009561	utp6	100	44.504	ENSCHIG00000017954	-	93	44.504	Capra_hircus
ENSPMAG00000009561	utp6	99	41.623	ENSTSYG00000002202	UTP6	92	41.623	Carlito_syrichta
ENSPMAG00000009561	utp6	91	41.520	ENSCAPG00000017595	UTP6	90	41.520	Cavia_aperea
ENSPMAG00000009561	utp6	99	46.195	ENSCPOG00000014294	UTP6	93	46.195	Cavia_porcellus
ENSPMAG00000009561	utp6	100	41.228	ENSCCAG00000033318	-	93	41.228	Cebus_capucinus
ENSPMAG00000009561	utp6	100	45.922	ENSCATG00000034868	UTP6	93	45.922	Cercocebus_atys
ENSPMAG00000009561	utp6	99	46.549	ENSCLAG00000007274	UTP6	93	46.549	Chinchilla_lanigera
ENSPMAG00000009561	utp6	100	46.140	ENSCSAG00000006595	UTP6	93	46.140	Chlorocebus_sabaeus
ENSPMAG00000009561	utp6	70	40.373	ENSCHOG00000010940	-	66	40.373	Choloepus_hoffmanni
ENSPMAG00000009561	utp6	100	47.695	ENSCPBG00000004652	UTP6	93	47.695	Chrysemys_picta_bellii
ENSPMAG00000009561	utp6	91	32.150	ENSCANG00000031141	UTP6	87	32.150	Colobus_angolensis_palliatus
ENSPMAG00000009561	utp6	99	47.276	ENSCGRG00001000046	Utp6	93	47.276	Cricetulus_griseus_chok1gshd
ENSPMAG00000009561	utp6	99	47.276	ENSCGRG00000011543	Utp6	98	47.276	Cricetulus_griseus_crigri
ENSPMAG00000009561	utp6	100	41.301	ENSCSEG00000013422	utp6	93	41.301	Cynoglossus_semilaevis
ENSPMAG00000009561	utp6	100	43.617	ENSCVAG00000020322	utp6	93	43.617	Cyprinodon_variegatus
ENSPMAG00000009561	utp6	99	45.293	ENSDARG00000098433	utp6	92	45.293	Danio_rerio
ENSPMAG00000009561	utp6	100	46.842	ENSDNOG00000037018	UTP6	93	46.842	Dasypus_novemcinctus
ENSPMAG00000009561	utp6	95	44.074	ENSDORG00000003843	Utp6	92	46.139	Dipodomys_ordii
ENSPMAG00000009561	utp6	100	46.667	ENSEASG00005010870	UTP6	93	46.667	Equus_asinus_asinus
ENSPMAG00000009561	utp6	100	46.316	ENSECAG00000022217	UTP6	93	46.316	Equus_caballus
ENSPMAG00000009561	utp6	100	46.454	ENSELUG00000006618	utp6	93	46.454	Esox_lucius
ENSPMAG00000009561	utp6	100	45.053	ENSFCAG00000015795	UTP6	93	44.523	Felis_catus
ENSPMAG00000009561	utp6	100	46.986	ENSFALG00000002282	UTP6	93	46.986	Ficedula_albicollis
ENSPMAG00000009561	utp6	99	46.549	ENSFDAG00000019506	UTP6	93	46.549	Fukomys_damarensis
ENSPMAG00000009561	utp6	100	44.149	ENSFHEG00000010373	utp6	93	44.149	Fundulus_heteroclitus
ENSPMAG00000009561	utp6	100	43.972	ENSGMOG00000011958	utp6	93	43.972	Gadus_morhua
ENSPMAG00000009561	utp6	100	47.340	ENSGALG00000003260	UTP6	93	47.340	Gallus_gallus
ENSPMAG00000009561	utp6	100	43.640	ENSGAFG00000008505	utp6	93	43.640	Gambusia_affinis
ENSPMAG00000009561	utp6	100	44.504	ENSGACG00000019424	utp6	93	44.504	Gasterosteus_aculeatus
ENSPMAG00000009561	utp6	100	47.340	ENSGAGG00000004820	UTP6	93	47.340	Gopherus_agassizii
ENSPMAG00000009561	utp6	100	37.699	ENSGGOG00000026003	-	92	37.699	Gorilla_gorilla
ENSPMAG00000009561	utp6	100	45.965	ENSGGOG00000013569	UTP6	93	45.965	Gorilla_gorilla
ENSPMAG00000009561	utp6	100	45.567	ENSHBUG00000018668	utp6	93	45.567	Haplochromis_burtoni
ENSPMAG00000009561	utp6	98	42.210	ENSHGLG00000008642	-	93	42.210	Heterocephalus_glaber_female
ENSPMAG00000009561	utp6	99	45.343	ENSHGLG00000010332	UTP6	93	45.343	Heterocephalus_glaber_female
ENSPMAG00000009561	utp6	99	43.585	ENSHGLG00100014271	-	93	43.585	Heterocephalus_glaber_male
ENSPMAG00000009561	utp6	93	43.643	ENSHGLG00100006047	-	92	43.643	Heterocephalus_glaber_male
ENSPMAG00000009561	utp6	100	43.838	ENSHCOG00000017277	utp6	93	43.838	Hippocampus_comes
ENSPMAG00000009561	utp6	100	45.567	ENSIPUG00000022587	Utp6	93	45.567	Ictalurus_punctatus
ENSPMAG00000009561	utp6	99	46.208	ENSSTOG00000015875	UTP6	93	46.208	Ictidomys_tridecemlineatus
ENSPMAG00000009561	utp6	100	43.972	ENSKMAG00000021631	utp6	93	43.972	Kryptolebias_marmoratus
ENSPMAG00000009561	utp6	100	44.504	ENSLBEG00000002115	utp6	93	44.504	Labrus_bergylta
ENSPMAG00000009561	utp6	100	47.965	ENSLACG00000017158	UTP6	93	47.965	Latimeria_chalumnae
ENSPMAG00000009561	utp6	91	46.693	ENSLOCG00000013797	utp6	83	46.693	Lepisosteus_oculatus
ENSPMAG00000009561	utp6	100	46.479	ENSLAFG00000013008	UTP6	93	46.479	Loxodonta_africana
ENSPMAG00000009561	utp6	100	46.140	ENSMFAG00000038842	UTP6	93	46.140	Macaca_fascicularis
ENSPMAG00000009561	utp6	79	39.565	ENSMFAG00000041904	-	86	39.565	Macaca_fascicularis
ENSPMAG00000009561	utp6	100	46.140	ENSMMUG00000020403	UTP6	93	46.140	Macaca_mulatta
ENSPMAG00000009561	utp6	100	46.140	ENSMNEG00000039480	UTP6	93	46.140	Macaca_nemestrina
ENSPMAG00000009561	utp6	99	37.011	ENSMLEG00000039364	-	92	37.011	Mandrillus_leucophaeus
ENSPMAG00000009561	utp6	100	41.930	ENSMLEG00000032174	UTP6	92	41.930	Mandrillus_leucophaeus
ENSPMAG00000009561	utp6	100	44.700	ENSMAMG00000002228	utp6	92	44.700	Mastacembelus_armatus
ENSPMAG00000009561	utp6	100	45.567	ENSMZEG00005023895	utp6	93	45.567	Maylandia_zebra
ENSPMAG00000009561	utp6	100	47.257	ENSMGAG00000008111	UTP6	98	47.257	Meleagris_gallopavo
ENSPMAG00000009561	utp6	99	47.163	ENSMAUG00000021895	Utp6	93	47.163	Mesocricetus_auratus
ENSPMAG00000009561	utp6	100	45.213	ENSMICG00000002632	UTP6	93	45.213	Microcebus_murinus
ENSPMAG00000009561	utp6	99	46.359	ENSMOCG00000014163	Utp6	93	46.359	Microtus_ochrogaster
ENSPMAG00000009561	utp6	100	43.794	ENSMMOG00000008653	utp6	93	43.794	Mola_mola
ENSPMAG00000009561	utp6	100	46.643	ENSMODG00000019206	UTP6	93	46.643	Monodelphis_domestica
ENSPMAG00000009561	utp6	100	45.760	ENSMALG00000021112	utp6	97	45.760	Monopterus_albus
ENSPMAG00000009561	utp6	99	45.648	MGP_CAROLIEiJ_G0016828	Utp6	93	45.648	Mus_caroli
ENSPMAG00000009561	utp6	99	45.648	ENSMUSG00000035575	Utp6	93	45.648	Mus_musculus
ENSPMAG00000009561	utp6	99	44.050	MGP_PahariEiJ_G0017965	Utp6	92	44.050	Mus_pahari
ENSPMAG00000009561	utp6	99	45.471	MGP_SPRETEiJ_G0017672	Utp6	93	45.471	Mus_spretus
ENSPMAG00000009561	utp6	100	45.664	ENSMPUG00000014581	UTP6	93	45.664	Mustela_putorius_furo
ENSPMAG00000009561	utp6	100	46.127	ENSMLUG00000016422	UTP6	93	46.127	Myotis_lucifugus
ENSPMAG00000009561	utp6	99	46.181	ENSNGAG00000015482	Utp6	93	46.181	Nannospalax_galili
ENSPMAG00000009561	utp6	100	45.213	ENSNBRG00000019714	utp6	93	45.213	Neolamprologus_brichardi
ENSPMAG00000009561	utp6	100	45.470	ENSNLEG00000011009	UTP6	93	45.470	Nomascus_leucogenys
ENSPMAG00000009561	utp6	85	51.220	ENSOPRG00000008446	-	79	51.220	Ochotona_princeps
ENSPMAG00000009561	utp6	70	45.148	ENSODEG00000011971	UTP6	88	45.148	Octodon_degus
ENSPMAG00000009561	utp6	100	45.035	ENSONIG00000018090	utp6	93	45.035	Oreochromis_niloticus
ENSPMAG00000009561	utp6	100	47.803	ENSOANG00000004279	UTP6	94	47.803	Ornithorhynchus_anatinus
ENSPMAG00000009561	utp6	99	45.870	ENSOCUG00000016980	UTP6	93	45.870	Oryctolagus_cuniculus
ENSPMAG00000009561	utp6	99	45.648	ENSORLG00000003546	utp6	59	45.648	Oryzias_latipes
ENSPMAG00000009561	utp6	99	45.648	ENSORLG00020010377	utp6	93	45.648	Oryzias_latipes_hni
ENSPMAG00000009561	utp6	99	45.293	ENSORLG00015008893	utp6	93	45.293	Oryzias_latipes_hsok
ENSPMAG00000009561	utp6	100	45.567	ENSOMEG00000017487	utp6	93	45.567	Oryzias_melastigma
ENSPMAG00000009561	utp6	86	39.554	ENSOGAG00000004511	UTP6	92	39.554	Otolemur_garnettii
ENSPMAG00000009561	utp6	100	44.504	ENSOARG00000013474	UTP6	93	44.504	Ovis_aries
ENSPMAG00000009561	utp6	100	45.965	ENSPPAG00000038089	UTP6	93	45.965	Pan_paniscus
ENSPMAG00000009561	utp6	100	38.298	ENSPPAG00000016895	-	92	38.298	Pan_paniscus
ENSPMAG00000009561	utp6	100	46.195	ENSPPRG00000001010	UTP6	93	46.195	Panthera_pardus
ENSPMAG00000009561	utp6	100	46.372	ENSPTIG00000013913	UTP6	93	46.372	Panthera_tigris_altaica
ENSPMAG00000009561	utp6	100	38.298	ENSPTRG00000044798	-	92	38.298	Pan_troglodytes
ENSPMAG00000009561	utp6	100	45.965	ENSPTRG00000008977	UTP6	93	45.965	Pan_troglodytes
ENSPMAG00000009561	utp6	99	37.011	ENSPANG00000034274	-	93	36.833	Papio_anubis
ENSPMAG00000009561	utp6	100	44.483	ENSPANG00000023113	UTP6	93	44.483	Papio_anubis
ENSPMAG00000009561	utp6	100	47.163	ENSPKIG00000004653	utp6	98	47.163	Paramormyrops_kingsleyae
ENSPMAG00000009561	utp6	100	48.227	ENSPSIG00000012435	UTP6	93	48.227	Pelodiscus_sinensis
ENSPMAG00000009561	utp6	100	43.993	ENSPMGG00000009548	utp6	93	43.993	Periophthalmus_magnuspinnatus
ENSPMAG00000009561	utp6	99	46.892	ENSPEMG00000014081	Utp6	93	46.892	Peromyscus_maniculatus_bairdii
ENSPMAG00000009561	utp6	100	48.148	ENSPCIG00000029968	UTP6	80	48.148	Phascolarctos_cinereus
ENSPMAG00000009561	utp6	100	43.662	ENSPFOG00000013918	utp6	93	43.662	Poecilia_formosa
ENSPMAG00000009561	utp6	100	43.486	ENSPLAG00000017825	utp6	93	43.486	Poecilia_latipinna
ENSPMAG00000009561	utp6	100	43.838	ENSPMEG00000008133	utp6	93	43.838	Poecilia_mexicana
ENSPMAG00000009561	utp6	100	43.463	ENSPREG00000013108	utp6	92	43.463	Poecilia_reticulata
ENSPMAG00000009561	utp6	100	44.912	ENSPPYG00000008154	UTP6	92	44.912	Pongo_abelii
ENSPMAG00000009561	utp6	100	45.567	ENSPCOG00000010224	UTP6	93	45.567	Propithecus_coquereli
ENSPMAG00000009561	utp6	100	43.262	ENSPVAG00000015759	UTP6	93	43.262	Pteropus_vampyrus
ENSPMAG00000009561	utp6	100	45.390	ENSPNYG00000002290	utp6	93	45.390	Pundamilia_nyererei
ENSPMAG00000009561	utp6	100	45.035	ENSPNAG00000027370	utp6	92	45.035	Pygocentrus_nattereri
ENSPMAG00000009561	utp6	99	45.648	ENSRNOG00000014209	Utp6	93	45.648	Rattus_norvegicus
ENSPMAG00000009561	utp6	100	45.965	ENSRBIG00000020822	UTP6	93	45.965	Rhinopithecus_bieti
ENSPMAG00000009561	utp6	100	45.965	ENSRROG00000036838	UTP6	93	45.965	Rhinopithecus_roxellana
ENSPMAG00000009561	utp6	51	50.519	ENSSHAG00000018792	-	92	50.519	Sarcophilus_harrisii
ENSPMAG00000009561	utp6	100	43.794	ENSSFOG00015005978	utp6	93	43.794	Scleropages_formosus
ENSPMAG00000009561	utp6	100	45.745	ENSSMAG00000014772	utp6	93	45.745	Scophthalmus_maximus
ENSPMAG00000009561	utp6	100	46.277	ENSSDUG00000000329	utp6	93	46.277	Seriola_dumerili
ENSPMAG00000009561	utp6	100	46.277	ENSSLDG00000016724	utp6	93	46.277	Seriola_lalandi_dorsalis
ENSPMAG00000009561	utp6	99	40.354	ENSSARG00000010778	UTP6	92	40.354	Sorex_araneus
ENSPMAG00000009561	utp6	100	46.277	ENSSPUG00000005273	UTP6	93	46.277	Sphenodon_punctatus
ENSPMAG00000009561	utp6	100	44.154	ENSSPAG00000011871	utp6	92	44.154	Stegastes_partitus
ENSPMAG00000009561	utp6	100	46.099	ENSSSCG00000017745	UTP6	93	46.099	Sus_scrofa
ENSPMAG00000009561	utp6	100	46.726	ENSTGUG00000004999	UTP6	93	46.726	Taeniopygia_guttata
ENSPMAG00000009561	utp6	99	44.760	ENSTRUG00000012005	utp6	93	44.760	Takifugu_rubripes
ENSPMAG00000009561	utp6	99	44.583	ENSTNIG00000003235	utp6	93	44.583	Tetraodon_nigroviridis
ENSPMAG00000009561	utp6	64	44.928	ENSTBEG00000005388	-	60	44.928	Tupaia_belangeri
ENSPMAG00000009561	utp6	100	45.614	ENSTTRG00000009911	UTP6	93	45.614	Tursiops_truncatus
ENSPMAG00000009561	utp6	99	46.797	ENSUMAG00000015139	UTP6	92	46.797	Ursus_maritimus
ENSPMAG00000009561	utp6	100	46.018	ENSVPAG00000005782	UTP6	93	46.018	Vicugna_pacos
ENSPMAG00000009561	utp6	100	46.277	ENSVVUG00000012238	UTP6	93	46.277	Vulpes_vulpes
ENSPMAG00000009561	utp6	100	37.653	ENSXETG00000020057	utp6	93	37.653	Xenopus_tropicalis
ENSPMAG00000009561	utp6	100	42.882	ENSXCOG00000013626	utp6	93	42.882	Xiphophorus_couchianus
ENSPMAG00000009561	utp6	100	43.110	ENSXMAG00000017414	utp6	93	43.110	Xiphophorus_maculatus