EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSPMAG00000010222 (Gene tree)
Gene ID: -
Gene Symbol: ARF6
Alias: -
Full Name: ADP ribosylation factor 6
Gene Type: protein_coding
Species: Petromyzon_marinus
Status: putative
Strand: Plus strand
Length: 543 bases
Position: chrGL476756:231849-232391
Accession: 659
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSPMAP00000011203	MMR_HSR1	PF01926.23	5.6e-08	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSPMAT00000011249	ARF6-201	543	-	ENSPMAP00000011203	181 (aa)	-	S4S161

Gene Model

Click here to download ENSPMAG00000010222's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSPMAG00000010222's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSPMAG00000010222	ARF6	92	42.515	ENSPMAG00000004724	arl2	88	42.515
ENSPMAG00000010222	ARF6	98	54.237	ENSPMAG00000009600	arf4a	96	54.237
ENSPMAG00000010222	ARF6	89	48.795	ENSPMAG00000010027	ARL4A	81	48.795
ENSPMAG00000010222	ARF6	98	57.459	ENSPMAG00000000531	-	97	57.459
ENSPMAG00000010222	ARF6	77	37.143	ENSPMAG00000007507	arl8ba	74	37.143
ENSPMAG00000010222	ARF6	89	43.976	ENSPMAG00000010406	ARL4A	81	43.976
ENSPMAG00000010222	ARF6	98	48.619	ENSPMAG00000002070	arl1	97	48.619
ENSPMAG00000010222	ARF6	91	33.898	ENSPMAG00000003593	sar1b	87	33.898
ENSPMAG00000010222	ARF6	95	41.279	ENSPMAG00000009519	-	91	41.279
ENSPMAG00000010222	ARF6	94	40.588	ENSPMAG00000006880	arl8	92	40.588
ENSPMAG00000010222	ARF6	66	59.664	ENSPMAG00000005571	-	86	59.664
ENSPMAG00000010222	ARF6	96	58.621	ENSPMAG00000002035	arf1	93	58.621
ENSPMAG00000010222	ARF6	98	56.497	ENSPMAG00000003819	-	94	56.497

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSPMAG00000010222	ARF6	99	66.304	ENSAPLG00000001640	ARF6	99	66.304	Anas_platyrhynchos
ENSPMAG00000010222	ARF6	99	67.778	ENSACAG00000001335	ARF6	99	67.778	Anolis_carolinensis
ENSPMAG00000010222	ARF6	95	66.860	ENSLBEG00000024782	ARF6	91	66.860	Labrus_bergylta
ENSPMAG00000010222	ARF6	81	70.548	ENSMFAG00000001534	ARF6	97	70.548	Macaca_fascicularis
ENSPMAG00000010222	ARF6	81	70.548	ENSMNEG00000035341	ARF6	97	70.548	Macaca_nemestrina
ENSPMAG00000010222	ARF6	77	70.000	ENSPVAG00000017937	ARF6	100	70.000	Pteropus_vampyrus
ENSPMAG00000010222	ARF6	81	70.548	ENSSMAG00000006815	ARF6	97	70.548	Scophthalmus_maximus
ENSPMAG00000010222	ARF6	81	70.548	ENSSSCG00000005012	ARF6	97	70.548	Sus_scrofa
ENSPMAG00000010222	ARF6	99	65.556	ENSTNIG00000019582	arf6b	99	65.556	Tetraodon_nigroviridis
ENSPMAG00000010222	ARF6	81	70.548	ENSUMAG00000007345	ARF6	95	70.548	Ursus_maritimus
ENSPMAG00000010222	ARF6	87	66.456	ENSVVUG00000029816	ARF6	94	66.456	Vulpes_vulpes