EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSPMAG00000010266 (Gene tree)
Gene ID: -
Gene Symbol: -
Alias: -
Full Name: -
Gene Type: protein_coding
Species: Petromyzon_marinus
Status: putative
Strand: Minus strand
Length: 558 bases
Position: chrGL478123:50461-51018
Accession: -
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSPMAP00000011247	S10_plectin	PF03501.15	5.6e-37	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSPMAT00000011293	-	558	-	ENSPMAP00000011247	186 (aa)	-	S4S1A5

Gene Model

Click here to download ENSPMAG00000010266's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSPMAG00000010266's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSPMAG00000010266	-	84	51.899	ENSPMAG00000009236	rps10	96	50.276
ENSPMAG00000010266	-	95	51.705	ENSPMAG00000003064	-	94	51.705

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSPMAG00000010266	-	52	66.667	ENSAPOG00000016494	-	50	66.667	Acanthochromis_polyacanthus
ENSPMAG00000010266	-	53	70.707	ENSAPOG00000014059	-	68	70.707	Acanthochromis_polyacanthus
ENSPMAG00000010266	-	53	70.707	ENSACIG00000013806	-	55	70.707	Amphilophus_citrinellus
ENSPMAG00000010266	-	75	56.028	ENSACIG00000019704	-	71	56.028	Amphilophus_citrinellus
ENSPMAG00000010266	-	53	71.717	ENSAOCG00000011000	-	58	71.717	Amphiprion_ocellaris
ENSPMAG00000010266	-	52	69.792	ENSAOCG00000007730	-	56	69.792	Amphiprion_ocellaris
ENSPMAG00000010266	-	63	64.957	ENSAPEG00000019531	-	66	64.957	Amphiprion_percula
ENSPMAG00000010266	-	52	64.583	ENSATEG00000004340	-	68	64.583	Anabas_testudineus
ENSPMAG00000010266	-	53	67.677	ENSACLG00000001013	-	58	67.677	Astatotilapia_calliptera
ENSPMAG00000010266	-	53	77.778	ENSAMXG00000037914	-	60	77.778	Astyanax_mexicanus
ENSPMAG00000010266	-	50	51.613	WBGene00004479	rps-10	62	51.613	Caenorhabditis_elegans
ENSPMAG00000010266	-	78	50.000	ENSCING00000006180	-	99	47.059	Ciona_intestinalis
ENSPMAG00000010266	-	53	74.747	ENSCSEG00000009179	-	58	74.747	Cynoglossus_semilaevis
ENSPMAG00000010266	-	98	43.407	FBgn0027494	RpS10a	98	45.604	Drosophila_melanogaster
ENSPMAG00000010266	-	98	46.703	FBgn0285947	RpS10b	99	46.703	Drosophila_melanogaster
ENSPMAG00000010266	-	70	57.252	ENSEBUG00000015221	-	81	57.252	Eptatretus_burgeri
ENSPMAG00000010266	-	53	70.707	ENSFHEG00000008769	-	62	70.707	Fundulus_heteroclitus
ENSPMAG00000010266	-	53	72.449	ENSGAFG00000001335	-	50	72.449	Gambusia_affinis
ENSPMAG00000010266	-	53	67.677	ENSHBUG00000018067	-	58	67.677	Haplochromis_burtoni
ENSPMAG00000010266	-	53	72.727	ENSHBUG00000023819	-	60	72.727	Haplochromis_burtoni
ENSPMAG00000010266	-	53	72.449	ENSLBEG00000020432	-	64	72.449	Labrus_bergylta
ENSPMAG00000010266	-	76	58.974	ENSLACG00000010998	-	86	58.974	Latimeria_chalumnae
ENSPMAG00000010266	-	53	72.727	ENSMZEG00005007838	-	60	72.727	Maylandia_zebra
ENSPMAG00000010266	-	53	67.677	ENSMZEG00005026198	-	58	67.677	Maylandia_zebra
ENSPMAG00000010266	-	80	54.248	ENSMMOG00000003228	-	86	55.556	Mola_mola
ENSPMAG00000010266	-	55	66.019	ENSMMOG00000014380	-	54	66.019	Mola_mola
ENSPMAG00000010266	-	52	62.887	ENSMALG00000015614	-	60	62.887	Monopterus_albus
ENSPMAG00000010266	-	53	71.717	ENSNBRG00000008848	-	69	71.717	Neolamprologus_brichardi
ENSPMAG00000010266	-	73	53.676	ENSNBRG00000016554	-	78	53.676	Neolamprologus_brichardi
ENSPMAG00000010266	-	60	67.826	ENSPKIG00000013061	-	63	67.826	Paramormyrops_kingsleyae
ENSPMAG00000010266	-	53	72.727	ENSPMGG00000017071	-	53	72.727	Periophthalmus_magnuspinnatus
ENSPMAG00000010266	-	59	68.807	ENSPLAG00000012690	-	64	68.807	Poecilia_latipinna
ENSPMAG00000010266	-	80	51.974	ENSPNYG00000006286	-	84	51.974	Pundamilia_nyererei
ENSPMAG00000010266	-	53	71.717	ENSPNYG00000012665	-	60	71.717	Pundamilia_nyererei
ENSPMAG00000010266	-	95	46.893	ENSPNAG00000021290	-	88	46.893	Pygocentrus_nattereri
ENSPMAG00000010266	-	58	42.593	YMR230W	RPS10B	99	42.593	Saccharomyces_cerevisiae
ENSPMAG00000010266	-	58	43.519	YOR293W	RPS10A	99	43.519	Saccharomyces_cerevisiae
ENSPMAG00000010266	-	61	70.435	ENSSFOG00015012004	-	65	70.435	Scleropages_formosus
ENSPMAG00000010266	-	73	57.931	ENSSFOG00015009603	-	72	57.931	Scleropages_formosus
ENSPMAG00000010266	-	79	48.428	ENSSDUG00000011052	-	100	48.428	Seriola_dumerili
ENSPMAG00000010266	-	80	52.381	ENSSDUG00000010997	-	95	52.381	Seriola_dumerili
ENSPMAG00000010266	-	56	62.500	ENSSLDG00000016257	-	59	62.500	Seriola_lalandi_dorsalis
ENSPMAG00000010266	-	53	71.717	ENSSLDG00000012473	-	63	71.717	Seriola_lalandi_dorsalis
ENSPMAG00000010266	-	53	71.717	ENSSPAG00000015615	-	77	71.717	Stegastes_partitus
ENSPMAG00000010266	-	52	66.667	ENSSPAG00000012512	-	50	66.667	Stegastes_partitus
ENSPMAG00000010266	-	53	74.747	ENSSSCG00000033521	-	61	74.747	Sus_scrofa
ENSPMAG00000010266	-	51	75.532	ENSXETG00000032983	-	86	54.819	Xenopus_tropicalis
ENSPMAG00000010266	-	53	71.717	ENSXCOG00000016917	-	61	71.717	Xiphophorus_couchianus
ENSPMAG00000010266	-	71	59.848	ENSXMAG00000029046	-	76	59.848	Xiphophorus_maculatus