EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSPMAG00000010296 (Gene tree)
Gene ID: -
Gene Symbol: sf3b5
Alias: -
Full Name: splicing factor 3b%2C subunit 5
Gene Type: protein_coding
Species: Petromyzon_marinus
Status: putative
Strand: Plus strand
Length: 258 bases
Position: chrGL477845:181126-181383
Accession: ZDB-GENE-040718-181
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSPMAP00000011277	SF3b10	PF07189.11	8.6e-42	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSPMAT00000011323	-	258	-	ENSPMAP00000011277	86 (aa)	-	S4S1D5

Gene Model

Click here to download ENSPMAG00000010296's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSPMAG00000010296's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSPMAG00000010296	sf3b5	99	90.588	ENSG00000169976	SF3B5	99	90.588	Homo_sapiens
ENSPMAG00000010296	sf3b5	100	87.209	ENSAPOG00000001721	sf3b5	100	87.209	Acanthochromis_polyacanthus
ENSPMAG00000010296	sf3b5	100	89.535	ENSACIG00000008106	sf3b5	100	89.535	Amphilophus_citrinellus
ENSPMAG00000010296	sf3b5	100	87.209	ENSAOCG00000023367	sf3b5	100	87.209	Amphiprion_ocellaris
ENSPMAG00000010296	sf3b5	100	87.209	ENSAPEG00000004605	sf3b5	100	87.209	Amphiprion_percula
ENSPMAG00000010296	sf3b5	100	88.372	ENSATEG00000009720	sf3b5	100	88.372	Anabas_testudineus
ENSPMAG00000010296	sf3b5	100	87.209	ENSACAG00000007948	SF3B5	100	87.209	Anolis_carolinensis
ENSPMAG00000010296	sf3b5	99	90.588	ENSANAG00000019999	SF3B5	99	90.588	Aotus_nancymaae
ENSPMAG00000010296	sf3b5	100	89.535	ENSACLG00000022410	sf3b5	100	89.535	Astatotilapia_calliptera
ENSPMAG00000010296	sf3b5	99	90.588	ENSBTAG00000009795	SF3B5	99	90.588	Bos_taurus
ENSPMAG00000010296	sf3b5	99	90.588	ENSCJAG00000046566	SF3B5	99	90.588	Callithrix_jacchus
ENSPMAG00000010296	sf3b5	99	90.588	ENSCAFG00000032495	SF3B5	99	90.588	Canis_familiaris
ENSPMAG00000010296	sf3b5	99	90.588	ENSCAFG00020000873	SF3B5	99	90.588	Canis_lupus_dingo
ENSPMAG00000010296	sf3b5	99	90.588	ENSCHIG00000007987	SF3B5	99	90.588	Capra_hircus
ENSPMAG00000010296	sf3b5	99	90.588	ENSTSYG00000012236	SF3B5	99	90.588	Carlito_syrichta
ENSPMAG00000010296	sf3b5	99	90.588	ENSCPOG00000012435	SF3B5	99	90.588	Cavia_porcellus
ENSPMAG00000010296	sf3b5	99	90.588	ENSCCAG00000006528	SF3B5	99	90.588	Cebus_capucinus
ENSPMAG00000010296	sf3b5	99	90.588	ENSCATG00000010192	SF3B5	99	90.588	Cercocebus_atys
ENSPMAG00000010296	sf3b5	99	90.588	ENSCLAG00000017802	SF3B5	99	90.588	Chinchilla_lanigera
ENSPMAG00000010296	sf3b5	99	90.588	ENSCSAG00000000187	SF3B5	99	90.588	Chlorocebus_sabaeus
ENSPMAG00000010296	sf3b5	100	89.535	ENSCPBG00000017148	SF3B5	100	89.535	Chrysemys_picta_bellii
ENSPMAG00000010296	sf3b5	97	74.699	ENSCING00000021953	-	97	74.699	Ciona_intestinalis
ENSPMAG00000010296	sf3b5	99	90.588	ENSCANG00000002639	SF3B5	99	90.588	Colobus_angolensis_palliatus
ENSPMAG00000010296	sf3b5	99	89.412	ENSCGRG00001007249	Sf3b5	99	89.412	Cricetulus_griseus_chok1gshd
ENSPMAG00000010296	sf3b5	99	89.412	ENSCGRG00000019185	Sf3b5	99	89.412	Cricetulus_griseus_crigri
ENSPMAG00000010296	sf3b5	100	87.209	ENSCSEG00000003216	sf3b5	100	87.209	Cynoglossus_semilaevis
ENSPMAG00000010296	sf3b5	100	88.372	ENSCVAG00000005040	sf3b5	100	88.372	Cyprinodon_variegatus
ENSPMAG00000010296	sf3b5	100	90.698	ENSDARG00000016855	sf3b5	100	90.698	Danio_rerio
ENSPMAG00000010296	sf3b5	99	90.588	ENSDNOG00000048829	SF3B5	81	90.588	Dasypus_novemcinctus
ENSPMAG00000010296	sf3b5	99	90.588	ENSDORG00000005838	Sf3b5	99	90.588	Dipodomys_ordii
ENSPMAG00000010296	sf3b5	99	85.882	FBgn0040534	Sf3b5	100	85.882	Drosophila_melanogaster
ENSPMAG00000010296	sf3b5	99	90.588	ENSETEG00000004047	SF3B5	99	90.588	Echinops_telfairi
ENSPMAG00000010296	sf3b5	99	88.235	ENSEBUG00000002311	sf3b5	100	88.235	Eptatretus_burgeri
ENSPMAG00000010296	sf3b5	99	90.588	ENSEASG00005009522	SF3B5	99	90.588	Equus_asinus_asinus
ENSPMAG00000010296	sf3b5	99	90.588	ENSECAG00000005457	SF3B5	99	90.588	Equus_caballus
ENSPMAG00000010296	sf3b5	100	88.372	ENSELUG00000014290	SF3B5	100	88.372	Esox_lucius
ENSPMAG00000010296	sf3b5	99	90.588	ENSFCAG00000000936	SF3B5	99	90.588	Felis_catus
ENSPMAG00000010296	sf3b5	100	86.047	ENSFALG00000015012	SF3B5	100	86.047	Ficedula_albicollis
ENSPMAG00000010296	sf3b5	99	90.588	ENSFDAG00000003664	SF3B5	99	90.588	Fukomys_damarensis
ENSPMAG00000010296	sf3b5	100	88.372	ENSFHEG00000020301	sf3b5	100	88.372	Fundulus_heteroclitus
ENSPMAG00000010296	sf3b5	100	89.535	ENSGMOG00000019972	sf3b5	100	89.535	Gadus_morhua
ENSPMAG00000010296	sf3b5	100	88.372	ENSGALG00000030824	SF3B5	100	88.372	Gallus_gallus
ENSPMAG00000010296	sf3b5	100	88.372	ENSGAFG00000000271	sf3b5	100	88.372	Gambusia_affinis
ENSPMAG00000010296	sf3b5	100	88.372	ENSGACG00000010363	sf3b5	100	88.372	Gasterosteus_aculeatus
ENSPMAG00000010296	sf3b5	100	89.535	ENSGAGG00000011434	SF3B5	100	89.535	Gopherus_agassizii
ENSPMAG00000010296	sf3b5	100	83.721	ENSGAGG00000000646	-	100	83.721	Gopherus_agassizii
ENSPMAG00000010296	sf3b5	99	90.588	ENSGGOG00000001537	SF3B5	99	90.588	Gorilla_gorilla
ENSPMAG00000010296	sf3b5	100	89.535	ENSHBUG00000008925	sf3b5	100	89.535	Haplochromis_burtoni
ENSPMAG00000010296	sf3b5	99	90.588	ENSHGLG00000021406	SF3B5	99	90.588	Heterocephalus_glaber_female
ENSPMAG00000010296	sf3b5	99	90.588	ENSHGLG00100020370	SF3B5	99	90.588	Heterocephalus_glaber_male
ENSPMAG00000010296	sf3b5	100	87.209	ENSHCOG00000009115	-	100	87.209	Hippocampus_comes
ENSPMAG00000010296	sf3b5	100	87.209	ENSHCOG00000016802	sf3b5	100	87.209	Hippocampus_comes
ENSPMAG00000010296	sf3b5	100	87.209	ENSHCOG00000016806	sf3b5	100	87.209	Hippocampus_comes
ENSPMAG00000010296	sf3b5	100	90.698	ENSIPUG00000015166	sf3b5	100	90.698	Ictalurus_punctatus
ENSPMAG00000010296	sf3b5	99	90.588	ENSSTOG00000003347	SF3B5	99	90.588	Ictidomys_tridecemlineatus
ENSPMAG00000010296	sf3b5	99	90.588	ENSJJAG00000001857	Sf3b5	99	90.588	Jaculus_jaculus
ENSPMAG00000010296	sf3b5	100	88.372	ENSKMAG00000002249	sf3b5	100	88.372	Kryptolebias_marmoratus
ENSPMAG00000010296	sf3b5	100	88.372	ENSLBEG00000019847	sf3b5	100	88.372	Labrus_bergylta
ENSPMAG00000010296	sf3b5	100	88.372	ENSLACG00000000946	SF3B5	100	88.372	Latimeria_chalumnae
ENSPMAG00000010296	sf3b5	100	89.535	ENSLOCG00000017352	sf3b5	100	89.535	Lepisosteus_oculatus
ENSPMAG00000010296	sf3b5	99	90.588	ENSLAFG00000032489	SF3B5	99	90.588	Loxodonta_africana
ENSPMAG00000010296	sf3b5	99	90.588	ENSMFAG00000029753	SF3B5	99	90.588	Macaca_fascicularis
ENSPMAG00000010296	sf3b5	99	90.588	ENSMMUG00000047691	SF3B5	99	90.588	Macaca_mulatta
ENSPMAG00000010296	sf3b5	99	90.588	ENSMNEG00000028236	SF3B5	99	90.588	Macaca_nemestrina
ENSPMAG00000010296	sf3b5	99	90.588	ENSMLEG00000007622	SF3B5	99	90.588	Mandrillus_leucophaeus
ENSPMAG00000010296	sf3b5	100	89.535	ENSMAMG00000021639	sf3b5	100	89.535	Mastacembelus_armatus
ENSPMAG00000010296	sf3b5	100	89.535	ENSMZEG00005028115	SF3B5	100	89.535	Maylandia_zebra
ENSPMAG00000010296	sf3b5	100	89.535	ENSMZEG00005027408	sf3b5	100	89.535	Maylandia_zebra
ENSPMAG00000010296	sf3b5	100	77.907	ENSMZEG00005027407	sf3b5	100	77.907	Maylandia_zebra
ENSPMAG00000010296	sf3b5	100	88.372	ENSMGAG00000015849	SF3B5	100	88.372	Meleagris_gallopavo
ENSPMAG00000010296	sf3b5	99	89.412	ENSMAUG00000008283	Sf3b5	99	89.412	Mesocricetus_auratus
ENSPMAG00000010296	sf3b5	99	90.588	ENSMICG00000014922	SF3B5	99	90.588	Microcebus_murinus
ENSPMAG00000010296	sf3b5	99	89.412	ENSMOCG00000001713	Sf3b5	99	89.412	Microtus_ochrogaster
ENSPMAG00000010296	sf3b5	100	89.535	ENSMMOG00000007956	sf3b5	100	89.535	Mola_mola
ENSPMAG00000010296	sf3b5	99	90.588	ENSMODG00000023291	SF3B5	83	90.588	Monodelphis_domestica
ENSPMAG00000010296	sf3b5	91	87.654	ENSMALG00000020357	sf3b5	99	87.654	Monopterus_albus
ENSPMAG00000010296	sf3b5	99	89.412	MGP_CAROLIEiJ_G0015120	Sf3b5	99	89.412	Mus_caroli
ENSPMAG00000010296	sf3b5	99	89.412	ENSMUSG00000078348	Sf3b5	99	89.412	Mus_musculus
ENSPMAG00000010296	sf3b5	99	89.412	MGP_PahariEiJ_G0023739	Sf3b5	99	89.412	Mus_pahari
ENSPMAG00000010296	sf3b5	99	89.412	MGP_SPRETEiJ_G0015928	Sf3b5	99	89.412	Mus_spretus
ENSPMAG00000010296	sf3b5	99	90.588	ENSMPUG00000018379	SF3B5	99	90.588	Mustela_putorius_furo
ENSPMAG00000010296	sf3b5	99	85.882	ENSMLUG00000010802	-	99	85.882	Myotis_lucifugus
ENSPMAG00000010296	sf3b5	99	90.588	ENSMLUG00000028504	-	99	90.588	Myotis_lucifugus
ENSPMAG00000010296	sf3b5	92	89.873	ENSMLUG00000025546	-	92	89.873	Myotis_lucifugus
ENSPMAG00000010296	sf3b5	99	90.588	ENSNGAG00000010732	Sf3b5	99	90.588	Nannospalax_galili
ENSPMAG00000010296	sf3b5	100	89.535	ENSNBRG00000014383	sf3b5	100	89.535	Neolamprologus_brichardi
ENSPMAG00000010296	sf3b5	99	90.588	ENSNLEG00000019307	SF3B5	99	90.588	Nomascus_leucogenys
ENSPMAG00000010296	sf3b5	99	90.588	ENSMEUG00000005440	-	99	90.588	Notamacropus_eugenii
ENSPMAG00000010296	sf3b5	99	90.588	ENSMEUG00000005445	-	99	90.588	Notamacropus_eugenii
ENSPMAG00000010296	sf3b5	99	89.412	ENSOPRG00000015107	SF3B5	99	89.412	Ochotona_princeps
ENSPMAG00000010296	sf3b5	99	90.588	ENSODEG00000019507	SF3B5	99	90.588	Octodon_degus
ENSPMAG00000010296	sf3b5	100	89.535	ENSONIG00000020725	sf3b5	100	89.535	Oreochromis_niloticus
ENSPMAG00000010296	sf3b5	67	89.655	ENSOANG00000015301	SF3B5	95	89.655	Ornithorhynchus_anatinus
ENSPMAG00000010296	sf3b5	99	90.588	ENSOCUG00000008752	SF3B5	99	90.588	Oryctolagus_cuniculus
ENSPMAG00000010296	sf3b5	100	90.698	ENSORLG00000004925	sf3b5	100	90.698	Oryzias_latipes
ENSPMAG00000010296	sf3b5	100	90.698	ENSORLG00020011625	sf3b5	100	90.698	Oryzias_latipes_hni
ENSPMAG00000010296	sf3b5	100	90.698	ENSORLG00015017061	sf3b5	100	90.698	Oryzias_latipes_hsok
ENSPMAG00000010296	sf3b5	100	90.698	ENSOMEG00000010620	sf3b5	100	90.698	Oryzias_melastigma
ENSPMAG00000010296	sf3b5	99	90.588	ENSOGAG00000012152	SF3B5	99	90.588	Otolemur_garnettii
ENSPMAG00000010296	sf3b5	99	88.235	ENSOARG00000002617	SF3B5	99	88.235	Ovis_aries
ENSPMAG00000010296	sf3b5	92	91.139	ENSOARG00000019486	-	95	91.139	Ovis_aries
ENSPMAG00000010296	sf3b5	99	90.588	ENSPPAG00000012940	SF3B5	99	90.588	Pan_paniscus
ENSPMAG00000010296	sf3b5	99	90.588	ENSPPRG00000021262	SF3B5	99	90.588	Panthera_pardus
ENSPMAG00000010296	sf3b5	99	90.588	ENSPTIG00000001952	SF3B5	99	90.588	Panthera_tigris_altaica
ENSPMAG00000010296	sf3b5	99	90.588	ENSPTRG00000018676	SF3B5	99	90.588	Pan_troglodytes
ENSPMAG00000010296	sf3b5	99	90.588	ENSPANG00000034242	SF3B5	99	90.588	Papio_anubis
ENSPMAG00000010296	sf3b5	100	89.535	ENSPKIG00000006057	sf3b5	100	89.535	Paramormyrops_kingsleyae
ENSPMAG00000010296	sf3b5	100	89.535	ENSPSIG00000001262	SF3B5	100	89.535	Pelodiscus_sinensis
ENSPMAG00000010296	sf3b5	100	87.209	ENSPMGG00000014804	sf3b5	100	87.209	Periophthalmus_magnuspinnatus
ENSPMAG00000010296	sf3b5	99	89.412	ENSPEMG00000012931	Sf3b5	99	89.412	Peromyscus_maniculatus_bairdii
ENSPMAG00000010296	sf3b5	99	70.588	ENSPCIG00000025007	-	99	70.588	Phascolarctos_cinereus
ENSPMAG00000010296	sf3b5	92	93.671	ENSPCIG00000011344	-	77	93.671	Phascolarctos_cinereus
ENSPMAG00000010296	sf3b5	100	88.372	ENSPFOG00000019994	sf3b5	100	88.372	Poecilia_formosa
ENSPMAG00000010296	sf3b5	100	88.372	ENSPLAG00000008412	sf3b5	100	88.372	Poecilia_latipinna
ENSPMAG00000010296	sf3b5	100	88.372	ENSPMEG00000020050	sf3b5	100	88.372	Poecilia_mexicana
ENSPMAG00000010296	sf3b5	100	88.372	ENSPREG00000009242	sf3b5	100	88.372	Poecilia_reticulata
ENSPMAG00000010296	sf3b5	99	90.588	ENSPPYG00000017068	SF3B5	99	90.588	Pongo_abelii
ENSPMAG00000010296	sf3b5	99	90.588	ENSPCAG00000009332	SF3B5	99	90.588	Procavia_capensis
ENSPMAG00000010296	sf3b5	99	90.588	ENSPCOG00000013754	SF3B5	99	90.588	Propithecus_coquereli
ENSPMAG00000010296	sf3b5	56	89.583	ENSPVAG00000002820	SF3B5	100	89.583	Pteropus_vampyrus
ENSPMAG00000010296	sf3b5	100	89.535	ENSPNYG00000002075	sf3b5	100	89.535	Pundamilia_nyererei
ENSPMAG00000010296	sf3b5	100	91.860	ENSPNAG00000004942	sf3b5	100	91.860	Pygocentrus_nattereri
ENSPMAG00000010296	sf3b5	99	89.412	ENSRNOG00000014908	Sf3b5	99	89.412	Rattus_norvegicus
ENSPMAG00000010296	sf3b5	99	90.588	ENSRBIG00000006301	SF3B5	99	90.588	Rhinopithecus_bieti
ENSPMAG00000010296	sf3b5	99	90.588	ENSRROG00000037067	SF3B5	99	90.588	Rhinopithecus_roxellana
ENSPMAG00000010296	sf3b5	99	90.588	ENSSBOG00000006122	SF3B5	99	90.588	Saimiri_boliviensis_boliviensis
ENSPMAG00000010296	sf3b5	99	91.765	ENSSHAG00000015670	SF3B5	99	91.765	Sarcophilus_harrisii
ENSPMAG00000010296	sf3b5	100	90.698	ENSSFOG00015015767	sf3b5	100	90.698	Scleropages_formosus
ENSPMAG00000010296	sf3b5	100	88.372	ENSSMAG00000018852	sf3b5	100	88.372	Scophthalmus_maximus
ENSPMAG00000010296	sf3b5	100	88.372	ENSSDUG00000018161	sf3b5	100	88.372	Seriola_dumerili
ENSPMAG00000010296	sf3b5	100	88.372	ENSSLDG00000014547	sf3b5	100	88.372	Seriola_lalandi_dorsalis
ENSPMAG00000010296	sf3b5	99	90.588	ENSSARG00000007820	SF3B5	99	90.588	Sorex_araneus
ENSPMAG00000010296	sf3b5	100	87.209	ENSSPAG00000017371	-	100	87.209	Stegastes_partitus
ENSPMAG00000010296	sf3b5	100	87.209	ENSSPAG00000009244	sf3b5	100	87.209	Stegastes_partitus
ENSPMAG00000010296	sf3b5	99	90.588	ENSSSCG00000035578	SF3B5	99	90.588	Sus_scrofa
ENSPMAG00000010296	sf3b5	100	88.372	ENSTGUG00000010810	SF3B5	100	88.372	Taeniopygia_guttata
ENSPMAG00000010296	sf3b5	100	87.209	ENSTRUG00000005577	sf3b5	100	87.209	Takifugu_rubripes
ENSPMAG00000010296	sf3b5	100	87.209	ENSTNIG00000001265	sf3b5	100	87.209	Tetraodon_nigroviridis
ENSPMAG00000010296	sf3b5	99	91.765	ENSTBEG00000003072	SF3B5	99	91.765	Tupaia_belangeri
ENSPMAG00000010296	sf3b5	99	90.588	ENSTTRG00000008817	SF3B5	99	90.588	Tursiops_truncatus
ENSPMAG00000010296	sf3b5	99	90.588	ENSUAMG00000027296	SF3B5	99	90.588	Ursus_americanus
ENSPMAG00000010296	sf3b5	99	90.588	ENSUMAG00000005448	SF3B5	99	90.588	Ursus_maritimus
ENSPMAG00000010296	sf3b5	99	90.588	ENSVPAG00000003826	SF3B5	99	90.588	Vicugna_pacos
ENSPMAG00000010296	sf3b5	99	90.588	ENSVVUG00000004703	SF3B5	99	90.588	Vulpes_vulpes
ENSPMAG00000010296	sf3b5	100	88.372	ENSXETG00000021409	sf3b5	100	88.372	Xenopus_tropicalis
ENSPMAG00000010296	sf3b5	100	88.372	ENSXMAG00000019971	sf3b5	100	88.372	Xiphophorus_maculatus