EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSPMEG00000000174 (Gene tree)
Gene ID: -
Gene Symbol: oscp1a
Alias: -
Full Name: organic solute carrier partner 1a
Gene Type: protein_coding
Species: Poecilia_mexicana
Status: putative
Strand: Plus strand
Length: 855 bases
Position: chrKQ553059.1:69915-70769
Accession: ZDB-GENE-080204-2
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSPMEP00000025832	LSM	PF01423.22	2.8e-13	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSPMET00000004161	-	348	-	ENSPMEP00000025832	115 (aa)	-	-

Gene Model

Click here to download ENSPMEG00000000174's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSPMEG00000000174's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSPMEG00000000174	oscp1a	77	31.111	ENSPMEG00000016378	lsm4	63	31.111
ENSPMEG00000000174	oscp1a	61	32.877	ENSPMEG00000019574	si:ch73-14h10.2	77	32.877

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSPMEG00000000174	oscp1a	98	65.789	ENSG00000181817	LSM10	93	65.789	Homo_sapiens
ENSPMEG00000000174	oscp1a	94	68.519	ENSAMEG00000019854	LSM10	88	68.519	Ailuropoda_melanoleuca
ENSPMEG00000000174	oscp1a	98	70.796	ENSACIG00000015420	oscp1a	75	70.796	Amphilophus_citrinellus
ENSPMEG00000000174	oscp1a	98	77.876	ENSAOCG00000015618	LSM10	93	77.876	Amphiprion_ocellaris
ENSPMEG00000000174	oscp1a	90	76.923	ENSAOCG00000015607	LSM10	81	76.923	Amphiprion_ocellaris
ENSPMEG00000000174	oscp1a	98	77.876	ENSAOCG00000014654	-	93	77.876	Amphiprion_ocellaris
ENSPMEG00000000174	oscp1a	90	76.923	ENSAPEG00000021851	LSM10	81	76.923	Amphiprion_percula
ENSPMEG00000000174	oscp1a	98	77.876	ENSAPEG00000021845	-	93	77.876	Amphiprion_percula
ENSPMEG00000000174	oscp1a	93	72.897	ENSATEG00000006310	oscp1a	79	72.897	Anabas_testudineus
ENSPMEG00000000174	oscp1a	95	62.385	ENSACAG00000001231	LSM10	89	62.385	Anolis_carolinensis
ENSPMEG00000000174	oscp1a	98	65.789	ENSANAG00000018759	-	93	65.789	Aotus_nancymaae
ENSPMEG00000000174	oscp1a	97	63.717	ENSANAG00000031489	-	93	63.717	Aotus_nancymaae
ENSPMEG00000000174	oscp1a	98	68.142	ENSACLG00000004728	oscp1a	92	68.142	Astatotilapia_calliptera
ENSPMEG00000000174	oscp1a	98	69.027	ENSAMXG00000025301	oscp1a	93	69.027	Astyanax_mexicanus
ENSPMEG00000000174	oscp1a	97	65.487	ENSBTAG00000024096	LSM10	93	65.487	Bos_taurus
ENSPMEG00000000174	oscp1a	98	65.789	ENSCJAG00000044880	LSM10	93	65.789	Callithrix_jacchus
ENSPMEG00000000174	oscp1a	94	69.444	ENSCAFG00000003382	LSM10	88	69.444	Canis_familiaris
ENSPMEG00000000174	oscp1a	94	69.444	ENSCAFG00020008920	LSM10	88	69.444	Canis_lupus_dingo
ENSPMEG00000000174	oscp1a	97	65.487	ENSCHIG00000009398	LSM10	93	65.487	Capra_hircus
ENSPMEG00000000174	oscp1a	94	67.593	ENSCAPG00000012567	LSM10	88	67.593	Cavia_aperea
ENSPMEG00000000174	oscp1a	94	67.593	ENSCPOG00000039302	LSM10	88	67.593	Cavia_porcellus
ENSPMEG00000000174	oscp1a	97	62.832	ENSCCAG00000008378	-	92	62.832	Cebus_capucinus
ENSPMEG00000000174	oscp1a	98	65.789	ENSCCAG00000018913	-	93	65.789	Cebus_capucinus
ENSPMEG00000000174	oscp1a	98	65.789	ENSCATG00000006589	LSM10	93	65.789	Cercocebus_atys
ENSPMEG00000000174	oscp1a	94	67.593	ENSCLAG00000008633	LSM10	88	67.593	Chinchilla_lanigera
ENSPMEG00000000174	oscp1a	98	65.789	ENSCSAG00000000134	LSM10	93	65.789	Chlorocebus_sabaeus
ENSPMEG00000000174	oscp1a	96	62.931	ENSCHOG00000008615	LSM10	93	62.931	Choloepus_hoffmanni
ENSPMEG00000000174	oscp1a	80	33.696	ENSCSAVG00000001896	-	79	33.696	Ciona_savignyi
ENSPMEG00000000174	oscp1a	98	65.789	ENSCANG00000019928	LSM10	93	65.789	Colobus_angolensis_palliatus
ENSPMEG00000000174	oscp1a	90	63.810	ENSCGRG00001022673	-	85	63.810	Cricetulus_griseus_chok1gshd
ENSPMEG00000000174	oscp1a	94	68.519	ENSCGRG00001004317	-	89	68.519	Cricetulus_griseus_chok1gshd
ENSPMEG00000000174	oscp1a	90	63.810	ENSCGRG00000015514	-	85	63.810	Cricetulus_griseus_crigri
ENSPMEG00000000174	oscp1a	94	68.519	ENSCGRG00000014935	-	89	68.519	Cricetulus_griseus_crigri
ENSPMEG00000000174	oscp1a	96	73.636	ENSCSEG00000010374	oscp1a	74	73.636	Cynoglossus_semilaevis
ENSPMEG00000000174	oscp1a	96	73.636	ENSCVAG00000001536	oscp1a	83	73.636	Cyprinodon_variegatus
ENSPMEG00000000174	oscp1a	66	71.053	ENSDARG00000109563	CABZ01074453.1	88	71.053	Danio_rerio
ENSPMEG00000000174	oscp1a	96	68.182	ENSDARG00000101222	oscp1a	91	68.182	Danio_rerio
ENSPMEG00000000174	oscp1a	94	68.519	ENSDNOG00000036662	LSM10	88	68.519	Dasypus_novemcinctus
ENSPMEG00000000174	oscp1a	94	67.593	ENSDORG00000007579	Lsm10	88	67.593	Dipodomys_ordii
ENSPMEG00000000174	oscp1a	95	66.055	ENSETEG00000005703	LSM10	88	66.055	Echinops_telfairi
ENSPMEG00000000174	oscp1a	96	50.909	ENSEBUG00000001312	oscp1a	90	50.909	Eptatretus_burgeri
ENSPMEG00000000174	oscp1a	94	68.519	ENSEASG00005012194	LSM10	88	68.519	Equus_asinus_asinus
ENSPMEG00000000174	oscp1a	94	68.519	ENSECAG00000005071	LSM10	88	68.519	Equus_caballus
ENSPMEG00000000174	oscp1a	94	69.444	ENSEEUG00000012032	LSM10	88	69.444	Erinaceus_europaeus
ENSPMEG00000000174	oscp1a	96	72.727	ENSELUG00000007452	oscp1a	90	72.727	Esox_lucius
ENSPMEG00000000174	oscp1a	94	68.519	ENSFALG00000000851	LSM10	88	68.519	Ficedula_albicollis
ENSPMEG00000000174	oscp1a	94	67.593	ENSFDAG00000021056	LSM10	88	67.593	Fukomys_damarensis
ENSPMEG00000000174	oscp1a	99	73.913	ENSFHEG00000001058	oscp1a	99	73.913	Fundulus_heteroclitus
ENSPMEG00000000174	oscp1a	96	64.545	ENSGMOG00000019832	oscp1a	92	64.545	Gadus_morhua
ENSPMEG00000000174	oscp1a	96	68.182	ENSGALG00000002127	LSM10	89	68.182	Gallus_gallus
ENSPMEG00000000174	oscp1a	99	85.965	ENSGAFG00000016445	oscp1a	92	85.965	Gambusia_affinis
ENSPMEG00000000174	oscp1a	98	73.451	ENSGACG00000002329	oscp1a	93	73.451	Gasterosteus_aculeatus
ENSPMEG00000000174	oscp1a	94	67.593	ENSGAGG00000024848	LSM10	88	67.593	Gopherus_agassizii
ENSPMEG00000000174	oscp1a	98	65.789	ENSGGOG00000003556	LSM10	93	65.789	Gorilla_gorilla
ENSPMEG00000000174	oscp1a	98	69.027	ENSHBUG00000001722	oscp1a	92	69.027	Haplochromis_burtoni
ENSPMEG00000000174	oscp1a	94	65.741	ENSHGLG00000011625	LSM10	88	65.741	Heterocephalus_glaber_female
ENSPMEG00000000174	oscp1a	94	65.741	ENSHGLG00100001769	LSM10	88	65.741	Heterocephalus_glaber_male
ENSPMEG00000000174	oscp1a	89	71.569	ENSIPUG00000005808	oscp1a	89	71.569	Ictalurus_punctatus
ENSPMEG00000000174	oscp1a	94	68.519	ENSSTOG00000000606	LSM10	88	68.519	Ictidomys_tridecemlineatus
ENSPMEG00000000174	oscp1a	98	76.106	ENSKMAG00000012143	oscp1a	93	76.106	Kryptolebias_marmoratus
ENSPMEG00000000174	oscp1a	99	68.421	ENSLBEG00000017764	oscp1a	93	68.421	Labrus_bergylta
ENSPMEG00000000174	oscp1a	94	60.185	ENSLACG00000015904	LSM10	83	60.185	Latimeria_chalumnae
ENSPMEG00000000174	oscp1a	98	66.372	ENSLOCG00000018277	oscp1a	93	66.372	Lepisosteus_oculatus
ENSPMEG00000000174	oscp1a	98	66.667	ENSLAFG00000009600	LSM10	93	66.667	Loxodonta_africana
ENSPMEG00000000174	oscp1a	98	65.789	ENSMFAG00000009115	LSM10	93	65.789	Macaca_fascicularis
ENSPMEG00000000174	oscp1a	98	65.789	ENSMMUG00000017338	LSM10	93	65.789	Macaca_mulatta
ENSPMEG00000000174	oscp1a	98	65.789	ENSMNEG00000020023	LSM10	93	65.789	Macaca_nemestrina
ENSPMEG00000000174	oscp1a	98	65.789	ENSMLEG00000025150	LSM10	93	65.789	Mandrillus_leucophaeus
ENSPMEG00000000174	oscp1a	98	71.681	ENSMAMG00000004427	oscp1a	93	71.681	Mastacembelus_armatus
ENSPMEG00000000174	oscp1a	98	68.142	ENSMZEG00005026307	oscp1a	92	68.142	Maylandia_zebra
ENSPMEG00000000174	oscp1a	96	67.273	ENSMGAG00000015707	LSM10	89	67.273	Meleagris_gallopavo
ENSPMEG00000000174	oscp1a	94	69.444	ENSMAUG00000016624	Lsm10	89	69.444	Mesocricetus_auratus
ENSPMEG00000000174	oscp1a	94	69.444	ENSMOCG00000021943	Lsm10	89	69.444	Microtus_ochrogaster
ENSPMEG00000000174	oscp1a	93	76.636	ENSMMOG00000013597	oscp1a	80	76.636	Mola_mola
ENSPMEG00000000174	oscp1a	94	71.296	ENSMODG00000023328	LSM10	88	71.296	Monodelphis_domestica
ENSPMEG00000000174	oscp1a	94	68.519	MGP_CAROLIEiJ_G0026467	Lsm10	90	70.238	Mus_caroli
ENSPMEG00000000174	oscp1a	94	68.519	ENSMUSG00000050188	Lsm10	90	70.238	Mus_musculus
ENSPMEG00000000174	oscp1a	94	68.519	MGP_PahariEiJ_G0028798	Lsm10	90	70.238	Mus_pahari
ENSPMEG00000000174	oscp1a	94	68.519	MGP_SPRETEiJ_G0027446	Lsm10	90	70.238	Mus_spretus
ENSPMEG00000000174	oscp1a	94	69.444	ENSMPUG00000018593	LSM10	88	69.444	Mustela_putorius_furo
ENSPMEG00000000174	oscp1a	94	68.519	ENSMLUG00000023895	LSM10	88	68.519	Myotis_lucifugus
ENSPMEG00000000174	oscp1a	94	66.667	ENSNGAG00000015011	Lsm10	88	66.667	Nannospalax_galili
ENSPMEG00000000174	oscp1a	98	69.912	ENSNBRG00000014306	oscp1a	92	69.912	Neolamprologus_brichardi
ENSPMEG00000000174	oscp1a	98	65.789	ENSNLEG00000033754	LSM10	93	65.789	Nomascus_leucogenys
ENSPMEG00000000174	oscp1a	94	71.296	ENSMEUG00000006313	LSM10	88	71.296	Notamacropus_eugenii
ENSPMEG00000000174	oscp1a	94	68.519	ENSOPRG00000001699	LSM10	88	68.519	Ochotona_princeps
ENSPMEG00000000174	oscp1a	94	67.593	ENSODEG00000019161	LSM10	88	67.593	Octodon_degus
ENSPMEG00000000174	oscp1a	98	69.912	ENSONIG00000020904	oscp1a	93	69.912	Oreochromis_niloticus
ENSPMEG00000000174	oscp1a	95	68.807	ENSOANG00000002066	LSM10	89	68.807	Ornithorhynchus_anatinus
ENSPMEG00000000174	oscp1a	94	67.593	ENSOCUG00000005333	LSM10	88	67.593	Oryctolagus_cuniculus
ENSPMEG00000000174	oscp1a	98	73.451	ENSORLG00000009504	oscp1a	93	73.451	Oryzias_latipes
ENSPMEG00000000174	oscp1a	98	73.451	ENSORLG00020016201	oscp1a	93	73.451	Oryzias_latipes_hni
ENSPMEG00000000174	oscp1a	98	72.566	ENSORLG00015007794	oscp1a	93	72.566	Oryzias_latipes_hsok
ENSPMEG00000000174	oscp1a	94	68.519	ENSOGAG00000002653	LSM10	88	68.519	Otolemur_garnettii
ENSPMEG00000000174	oscp1a	97	65.487	ENSOARG00000009596	LSM10	93	65.487	Ovis_aries
ENSPMEG00000000174	oscp1a	98	65.789	ENSPPAG00000023465	LSM10	93	65.789	Pan_paniscus
ENSPMEG00000000174	oscp1a	94	68.519	ENSPPRG00000014619	LSM10	88	68.519	Panthera_pardus
ENSPMEG00000000174	oscp1a	94	68.519	ENSPTIG00000004613	LSM10	88	68.519	Panthera_tigris_altaica
ENSPMEG00000000174	oscp1a	98	65.789	ENSPTRG00000000539	LSM10	93	65.789	Pan_troglodytes
ENSPMEG00000000174	oscp1a	98	65.789	ENSPANG00000023172	LSM10	93	65.789	Papio_anubis
ENSPMEG00000000174	oscp1a	97	69.643	ENSPKIG00000003728	oscp1a	90	69.643	Paramormyrops_kingsleyae
ENSPMEG00000000174	oscp1a	94	66.667	ENSPSIG00000000590	LSM10	88	66.667	Pelodiscus_sinensis
ENSPMEG00000000174	oscp1a	60	75.362	ENSPMGG00000015718	oscp1a	90	75.362	Periophthalmus_magnuspinnatus
ENSPMEG00000000174	oscp1a	82	70.213	ENSPCIG00000014865	LSM10	69	70.213	Phascolarctos_cinereus
ENSPMEG00000000174	oscp1a	96	97.273	ENSPFOG00000020490	oscp1a	93	97.273	Poecilia_formosa
ENSPMEG00000000174	oscp1a	98	97.345	ENSPLAG00000016537	oscp1a	86	97.345	Poecilia_latipinna
ENSPMEG00000000174	oscp1a	98	96.460	ENSPREG00000009899	oscp1a	86	96.460	Poecilia_reticulata
ENSPMEG00000000174	oscp1a	98	65.789	ENSPPYG00000001539	LSM10	93	65.789	Pongo_abelii
ENSPMEG00000000174	oscp1a	98	66.372	ENSPCAG00000002520	LSM10	93	66.372	Procavia_capensis
ENSPMEG00000000174	oscp1a	94	67.593	ENSPVAG00000008644	LSM10	88	67.593	Pteropus_vampyrus
ENSPMEG00000000174	oscp1a	98	69.027	ENSPNYG00000003138	oscp1a	92	69.027	Pundamilia_nyererei
ENSPMEG00000000174	oscp1a	98	69.027	ENSPNAG00000028829	oscp1a	93	69.027	Pygocentrus_nattereri
ENSPMEG00000000174	oscp1a	94	67.593	ENSRNOG00000025716	Lsm10	89	67.593	Rattus_norvegicus
ENSPMEG00000000174	oscp1a	98	65.789	ENSRBIG00000001561	LSM10	93	65.789	Rhinopithecus_bieti
ENSPMEG00000000174	oscp1a	98	65.789	ENSRROG00000011414	LSM10	93	65.789	Rhinopithecus_roxellana
ENSPMEG00000000174	oscp1a	98	65.789	ENSSBOG00000036413	-	93	65.789	Saimiri_boliviensis_boliviensis
ENSPMEG00000000174	oscp1a	94	71.296	ENSSHAG00000018056	LSM10	88	71.296	Sarcophilus_harrisii
ENSPMEG00000000174	oscp1a	97	74.775	ENSSFOG00015019954	lsm10	91	74.775	Scleropages_formosus
ENSPMEG00000000174	oscp1a	98	72.566	ENSSMAG00000001297	oscp1a	97	72.566	Scophthalmus_maximus
ENSPMEG00000000174	oscp1a	98	67.257	ENSSDUG00000007090	oscp1a	92	67.257	Seriola_dumerili
ENSPMEG00000000174	oscp1a	98	68.142	ENSSLDG00000000800	oscp1a	93	68.142	Seriola_lalandi_dorsalis
ENSPMEG00000000174	oscp1a	85	69.388	ENSSARG00000004211	LSM10	88	67.273	Sorex_araneus
ENSPMEG00000000174	oscp1a	98	73.451	ENSSPAG00000009229	oscp1a	93	73.451	Stegastes_partitus
ENSPMEG00000000174	oscp1a	98	66.667	ENSSSCG00000038916	LSM10	93	66.667	Sus_scrofa
ENSPMEG00000000174	oscp1a	94	68.519	ENSTGUG00000001600	-	89	68.519	Taeniopygia_guttata
ENSPMEG00000000174	oscp1a	94	69.444	ENSTGUG00000001602	-	89	69.444	Taeniopygia_guttata
ENSPMEG00000000174	oscp1a	96	72.727	ENSTRUG00000010531	oscp1a	89	72.727	Takifugu_rubripes
ENSPMEG00000000174	oscp1a	98	66.667	ENSTBEG00000016674	LSM10	93	66.667	Tupaia_belangeri
ENSPMEG00000000174	oscp1a	94	69.444	ENSUAMG00000020265	LSM10	88	69.444	Ursus_americanus
ENSPMEG00000000174	oscp1a	94	69.444	ENSUMAG00000001438	LSM10	50	69.444	Ursus_maritimus
ENSPMEG00000000174	oscp1a	94	69.444	ENSVVUG00000023209	LSM10	88	69.444	Vulpes_vulpes
ENSPMEG00000000174	oscp1a	96	61.818	ENSXETG00000027631	lsm10	89	61.818	Xenopus_tropicalis
ENSPMEG00000000174	oscp1a	94	92.593	ENSXCOG00000018776	oscp1a	68	92.593	Xiphophorus_couchianus
ENSPMEG00000000174	oscp1a	98	92.920	ENSXMAG00000019963	oscp1a	90	92.920	Xiphophorus_maculatus