EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSPMEG00000000321 (Gene tree)
Gene ID: 106921431
Gene Symbol: blm
Alias: -
Full Name: BLM RecQ like helicase
Gene Type: protein_coding
Species: Poecilia_mexicana
Status: putative
Strand: Minus strand
Length: 10667 bases
Position: chrKQ551469.1:34081-44747
Accession: 106921431
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSPMEP00000029300	HRDC	PF00570.23	2.5e-13	1	1
ENSPMEP00000029306	HRDC	PF00570.23	2.5e-13	1	1
ENSPMEP00000029300	BDHCT	PF08072.11	1.3e-19	1	1
ENSPMEP00000029306	BDHCT	PF08072.11	1.3e-19	1	1
ENSPMEP00000029300	DEAD	PF00270.29	1.6e-17	1	1
ENSPMEP00000029306	DEAD	PF00270.29	1.6e-17	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSPMET00000020240	-	5769	XM_014993135	ENSPMEP00000029306	1396 (aa)	XP_014848621	UPI00072DACDE
ENSPMET00000031920	-	5679	XM_014993137	ENSPMEP00000029300	1366 (aa)	XP_014848623	UPI00072E4CA8

Gene Model

Click here to download ENSPMEG00000000321's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSPMEG00000000321's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSPMEG00000000321	blm	59	65.301	ENSG00000197299	BLM	54	73.770	Homo_sapiens
ENSPMEG00000000321	blm	100	70.378	ENSAPOG00000017966	blm	100	70.997	Acanthochromis_polyacanthus
ENSPMEG00000000321	blm	85	65.128	ENSAMEG00000013843	BLM	63	64.615	Ailuropoda_melanoleuca
ENSPMEG00000000321	blm	100	72.277	ENSACIG00000023762	blm	100	72.014	Amphilophus_citrinellus
ENSPMEG00000000321	blm	100	69.736	ENSAOCG00000003318	blm	100	70.508	Amphiprion_ocellaris
ENSPMEG00000000321	blm	100	70.708	ENSAPEG00000018105	blm	100	70.778	Amphiprion_percula
ENSPMEG00000000321	blm	99	69.441	ENSATEG00000006421	blm	100	69.021	Anabas_testudineus
ENSPMEG00000000321	blm	80	51.497	ENSAPLG00000006878	BLM	72	60.417	Anas_platyrhynchos
ENSPMEG00000000321	blm	59	65.806	ENSACAG00000014275	BLM	84	65.508	Anolis_carolinensis
ENSPMEG00000000321	blm	59	63.248	ENSANAG00000038415	BLM	53	70.019	Aotus_nancymaae
ENSPMEG00000000321	blm	100	71.047	ENSACLG00000020354	blm	100	71.047	Astatotilapia_calliptera
ENSPMEG00000000321	blm	89	72.066	ENSAMXG00000016970	blm	87	72.170	Astyanax_mexicanus
ENSPMEG00000000321	blm	56	66.026	ENSCJAG00000009803	BLM	50	73.975	Callithrix_jacchus
ENSPMEG00000000321	blm	63	63.216	ENSCAFG00020016111	BLM	92	65.325	Canis_lupus_dingo
ENSPMEG00000000321	blm	56	65.217	ENSCHIG00000010329	BLM	55	64.917	Capra_hircus
ENSPMEG00000000321	blm	59	64.789	ENSTSYG00000012368	BLM	54	72.746	Carlito_syrichta
ENSPMEG00000000321	blm	62	71.014	ENSCAPG00000017976	BLM	75	71.014	Cavia_aperea
ENSPMEG00000000321	blm	83	49.551	ENSCPOG00000001761	BLM	59	61.198	Cavia_porcellus
ENSPMEG00000000321	blm	60	65.385	ENSCCAG00000023069	BLM	56	73.566	Cebus_capucinus
ENSPMEG00000000321	blm	59	65.173	ENSCATG00000040609	BLM	75	75.738	Cercocebus_atys
ENSPMEG00000000321	blm	99	46.537	ENSCLAG00000012111	BLM	59	62.156	Chinchilla_lanigera
ENSPMEG00000000321	blm	59	65.301	ENSCSAG00000017040	BLM	61	65.429	Chlorocebus_sabaeus
ENSPMEG00000000321	blm	50	60.185	ENSCHOG00000006255	BLM	50	60.185	Choloepus_hoffmanni
ENSPMEG00000000321	blm	82	50.998	ENSCPBG00000025000	BLM	72	68.516	Chrysemys_picta_bellii
ENSPMEG00000000321	blm	59	63.350	ENSCGRG00001024897	Blm	59	62.892	Cricetulus_griseus_chok1gshd
ENSPMEG00000000321	blm	95	65.341	ENSCSEG00000013483	blm	99	65.789	Cynoglossus_semilaevis
ENSPMEG00000000321	blm	76	78.448	ENSCVAG00000017583	blm	97	75.127	Cyprinodon_variegatus
ENSPMEG00000000321	blm	99	56.886	ENSDARG00000077089	blm	100	55.081	Danio_rerio
ENSPMEG00000000321	blm	60	64.450	ENSDNOG00000010159	BLM	59	64.450	Dasypus_novemcinctus
ENSPMEG00000000321	blm	59	62.349	ENSDORG00000011033	Blm	79	62.470	Dipodomys_ordii
ENSPMEG00000000321	blm	55	41.214	FBgn0002906	Blm	52	40.977	Drosophila_melanogaster
ENSPMEG00000000321	blm	55	55.556	ENSETEG00000015019	BLM	55	56.818	Echinops_telfairi
ENSPMEG00000000321	blm	67	60.948	ENSEASG00005006727	BLM	68	61.032	Equus_asinus_asinus
ENSPMEG00000000321	blm	56	64.413	ENSECAG00000011405	BLM	55	65.039	Equus_caballus
ENSPMEG00000000321	blm	60	63.939	ENSEEUG00000001434	BLM	59	63.555	Erinaceus_europaeus
ENSPMEG00000000321	blm	99	56.980	ENSELUG00000019098	blm	99	55.474	Esox_lucius
ENSPMEG00000000321	blm	64	64.962	ENSFCAG00000006087	BLM	59	73.006	Felis_catus
ENSPMEG00000000321	blm	75	54.194	ENSFALG00000010981	BLM	65	62.825	Ficedula_albicollis
ENSPMEG00000000321	blm	53	66.822	ENSFDAG00000012658	BLM	55	66.822	Fukomys_damarensis
ENSPMEG00000000321	blm	100	79.677	ENSFHEG00000002553	blm	100	79.126	Fundulus_heteroclitus
ENSPMEG00000000321	blm	99	59.617	ENSGMOG00000016431	blm	98	70.280	Gadus_morhua
ENSPMEG00000000321	blm	82	51.336	ENSGALG00000008256	BLM	83	63.945	Gallus_gallus
ENSPMEG00000000321	blm	100	94.234	ENSGAFG00000001117	blm	100	94.234	Gambusia_affinis
ENSPMEG00000000321	blm	99	66.040	ENSGACG00000010863	blm	100	88.068	Gasterosteus_aculeatus
ENSPMEG00000000321	blm	55	65.932	ENSGAGG00000005383	BLM	79	70.962	Gopherus_agassizii
ENSPMEG00000000321	blm	100	70.977	ENSHBUG00000015943	blm	100	71.121	Haplochromis_burtoni
ENSPMEG00000000321	blm	77	52.790	ENSHGLG00000013231	BLM	62	63.822	Heterocephalus_glaber_female
ENSPMEG00000000321	blm	74	68.451	ENSHCOG00000011455	blm	100	67.433	Hippocampus_comes
ENSPMEG00000000321	blm	75	63.716	ENSIPUG00000000529	blm	86	61.799	Ictalurus_punctatus
ENSPMEG00000000321	blm	75	54.135	ENSSTOG00000005000	BLM	61	60.162	Ictidomys_tridecemlineatus
ENSPMEG00000000321	blm	56	57.673	ENSJJAG00000016322	Blm	73	53.384	Jaculus_jaculus
ENSPMEG00000000321	blm	100	76.280	ENSKMAG00000016608	blm	100	74.621	Kryptolebias_marmoratus
ENSPMEG00000000321	blm	60	78.365	ENSLBEG00000018729	blm	96	78.277	Labrus_bergylta
ENSPMEG00000000321	blm	57	69.114	ENSLACG00000006490	BLM	54	68.734	Latimeria_chalumnae
ENSPMEG00000000321	blm	99	51.928	ENSLOCG00000014302	blm	60	69.855	Lepisosteus_oculatus
ENSPMEG00000000321	blm	56	65.429	ENSMFAG00000042982	BLM	75	76.066	Macaca_fascicularis
ENSPMEG00000000321	blm	56	65.429	ENSMMUG00000019526	BLM	75	76.066	Macaca_mulatta
ENSPMEG00000000321	blm	56	65.173	ENSMNEG00000031251	BLM	75	75.738	Macaca_nemestrina
ENSPMEG00000000321	blm	59	61.905	ENSMLEG00000032934	BLM	57	61.905	Mandrillus_leucophaeus
ENSPMEG00000000321	blm	99	69.913	ENSMAMG00000008726	blm	99	70.130	Mastacembelus_armatus
ENSPMEG00000000321	blm	100	69.993	ENSMZEG00005022323	blm	100	69.553	Maylandia_zebra
ENSPMEG00000000321	blm	85	65.256	ENSMAUG00000008953	Blm	55	65.641	Mesocricetus_auratus
ENSPMEG00000000321	blm	56	65.557	ENSMICG00000034442	BLM	50	73.770	Microcebus_murinus
ENSPMEG00000000321	blm	56	66.581	ENSMOCG00000016367	Blm	55	66.496	Microtus_ochrogaster
ENSPMEG00000000321	blm	100	67.740	ENSMMOG00000006959	blm	100	67.096	Mola_mola
ENSPMEG00000000321	blm	99	45.382	ENSMODG00000019449	BLM	59	61.503	Monodelphis_domestica
ENSPMEG00000000321	blm	100	70.726	ENSMALG00000007323	blm	100	69.943	Monopterus_albus
ENSPMEG00000000321	blm	56	65.245	MGP_CAROLIEiJ_G0029907	Blm	55	64.987	Mus_caroli
ENSPMEG00000000321	blm	56	65.245	ENSMUSG00000030528	Blm	54	65.245	Mus_musculus
ENSPMEG00000000321	blm	56	65.891	MGP_PahariEiJ_G0013129	Blm	55	65.633	Mus_pahari
ENSPMEG00000000321	blm	56	65.419	MGP_SPRETEiJ_G0031009	Blm	55	65.419	Mus_spretus
ENSPMEG00000000321	blm	56	65.134	ENSMLUG00000014697	BLM	55	64.751	Myotis_lucifugus
ENSPMEG00000000321	blm	85	64.987	ENSNGAG00000001275	Blm	63	64.987	Nannospalax_galili
ENSPMEG00000000321	blm	100	70.563	ENSNBRG00000019702	blm	100	70.259	Neolamprologus_brichardi
ENSPMEG00000000321	blm	59	62.996	ENSNLEG00000012087	BLM	74	61.421	Nomascus_leucogenys
ENSPMEG00000000321	blm	79	49.369	ENSMEUG00000007253	BLM	54	61.784	Notamacropus_eugenii
ENSPMEG00000000321	blm	52	64.944	ENSOPRG00000011667	BLM	51	64.525	Ochotona_princeps
ENSPMEG00000000321	blm	74	50.812	ENSODEG00000015373	BLM	80	56.835	Octodon_degus
ENSPMEG00000000321	blm	100	68.685	ENSONIG00000015193	blm	100	68.892	Oreochromis_niloticus
ENSPMEG00000000321	blm	55	65.375	ENSOANG00000009316	-	99	65.116	Ornithorhynchus_anatinus
ENSPMEG00000000321	blm	56	64.948	ENSOCUG00000013969	BLM	55	64.129	Oryctolagus_cuniculus
ENSPMEG00000000321	blm	100	73.002	ENSORLG00000008110	blm	100	72.098	Oryzias_latipes
ENSPMEG00000000321	blm	100	73.074	ENSORLG00020004812	blm	100	72.242	Oryzias_latipes_hni
ENSPMEG00000000321	blm	100	72.714	ENSORLG00015018640	blm	100	73.821	Oryzias_latipes_hsok
ENSPMEG00000000321	blm	100	72.026	ENSOMEG00000023545	blm	100	72.026	Oryzias_melastigma
ENSPMEG00000000321	blm	64	64.917	ENSOARG00000012875	BLM	63	64.917	Ovis_aries
ENSPMEG00000000321	blm	59	65.557	ENSPPAG00000032173	BLM	54	73.975	Pan_paniscus
ENSPMEG00000000321	blm	85	64.834	ENSPPRG00000002471	BLM	59	73.006	Panthera_pardus
ENSPMEG00000000321	blm	86	64.322	ENSPTIG00000016168	BLM	61	72.764	Panthera_tigris_altaica
ENSPMEG00000000321	blm	59	65.256	ENSPTRG00000007460	BLM	54	73.922	Pan_troglodytes
ENSPMEG00000000321	blm	56	65.301	ENSPANG00000018572	BLM	75	76.066	Papio_anubis
ENSPMEG00000000321	blm	70	68.560	ENSPMGG00000006629	blm	100	69.168	Periophthalmus_magnuspinnatus
ENSPMEG00000000321	blm	80	50.508	ENSPCIG00000006609	BLM	58	61.079	Phascolarctos_cinereus
ENSPMEG00000000321	blm	100	99.707	ENSPFOG00000005059	blm	100	99.707	Poecilia_formosa
ENSPMEG00000000321	blm	100	98.902	ENSPLAG00000017344	blm	100	98.902	Poecilia_latipinna
ENSPMEG00000000321	blm	100	96.429	ENSPREG00000007715	blm	100	96.429	Poecilia_reticulata
ENSPMEG00000000321	blm	56	64.277	ENSPPYG00000006784	BLM	55	64.533	Pongo_abelii
ENSPMEG00000000321	blm	57	63.486	ENSPCAG00000008960	BLM	55	63.232	Procavia_capensis
ENSPMEG00000000321	blm	59	59.524	ENSPCOG00000000439	BLM	56	59.524	Propithecus_coquereli
ENSPMEG00000000321	blm	70	76.412	ENSPVAG00000011642	BLM	59	76.412	Pteropus_vampyrus
ENSPMEG00000000321	blm	100	62.500	ENSPNYG00000010956	blm	100	62.614	Pundamilia_nyererei
ENSPMEG00000000321	blm	100	57.690	ENSPNAG00000011714	blm	100	57.906	Pygocentrus_nattereri
ENSPMEG00000000321	blm	56	65.128	ENSRNOG00000011213	Blm	55	65.335	Rattus_norvegicus
ENSPMEG00000000321	blm	60	64.789	ENSRBIG00000029656	BLM	75	75.738	Rhinopithecus_bieti
ENSPMEG00000000321	blm	59	64.789	ENSRROG00000037871	BLM	75	75.738	Rhinopithecus_roxellana
ENSPMEG00000000321	blm	50	73.156	ENSSBOG00000030957	BLM	54	73.361	Saimiri_boliviensis_boliviensis
ENSPMEG00000000321	blm	80	51.298	ENSSHAG00000007988	BLM	61	61.620	Sarcophilus_harrisii
ENSPMEG00000000321	blm	76	63.939	ENSSFOG00015015462	blm	80	62.892	Scleropages_formosus
ENSPMEG00000000321	blm	100	68.822	ENSSMAG00000001120	blm	100	68.822	Scophthalmus_maximus
ENSPMEG00000000321	blm	100	70.919	ENSSDUG00000010955	blm	100	70.421	Seriola_dumerili
ENSPMEG00000000321	blm	100	70.114	ENSSLDG00000000634	blm	100	69.472	Seriola_lalandi_dorsalis
ENSPMEG00000000321	blm	60	60.281	ENSSARG00000006398	BLM	62	60.435	Sorex_araneus
ENSPMEG00000000321	blm	75	53.471	ENSSPUG00000000013	BLM	97	51.421	Sphenodon_punctatus
ENSPMEG00000000321	blm	99	72.042	ENSSPAG00000013999	blm	99	71.489	Stegastes_partitus
ENSPMEG00000000321	blm	68	65.385	ENSSSCG00000001816	BLM	64	67.729	Sus_scrofa
ENSPMEG00000000321	blm	79	46.573	ENSTGUG00000009959	-	80	57.018	Taeniopygia_guttata
ENSPMEG00000000321	blm	99	65.043	ENSTRUG00000019860	blm	99	64.706	Takifugu_rubripes
ENSPMEG00000000321	blm	64	65.637	ENSTTRG00000016386	BLM	63	65.508	Tursiops_truncatus
ENSPMEG00000000321	blm	85	65.256	ENSUMAG00000009105	BLM	96	67.452	Ursus_maritimus
ENSPMEG00000000321	blm	65	61.489	ENSVPAG00000000085	BLM	64	61.489	Vicugna_pacos
ENSPMEG00000000321	blm	52	77.236	ENSVVUG00000006402	BLM	56	77.236	Vulpes_vulpes
ENSPMEG00000000321	blm	99	47.693	ENSXETG00000007847	blm	55	67.008	Xenopus_tropicalis
ENSPMEG00000000321	blm	100	91.643	ENSXCOG00000020227	blm	100	91.643	Xiphophorus_couchianus
ENSPMEG00000000321	blm	100	94.015	ENSXMAG00000002951	blm	100	94.015	Xiphophorus_maculatus