EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSPMEG00000000446 (Gene tree)
Gene ID: 106932474
Gene Symbol: sf3b1
Alias: -
Full Name: splicing factor 3b subunit 1
Gene Type: protein_coding
Species: Poecilia_mexicana
Status: putative
Strand: Plus strand
Length: 19132 bases
Position: chrKQ552483.1:70093-89224
Accession: 106932474
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSPMEP00000018068	SF3b1	PF08920.10	8.6e-48	1	1
ENSPMEP00000018075	SF3b1	PF08920.10	8.6e-48	1	1
ENSPMEP00000018090	SF3b1	PF08920.10	8.6e-48	1	1
ENSPMEP00000018121	SF3b1	PF08920.10	8.6e-48	1	1
ENSPMEP00000018139	SF3b1	PF08920.10	8.6e-48	1	1
ENSPMEP00000032851	SF3b1	PF08920.10	8.6e-48	1	1
ENSPMEP00000032861	SF3b1	PF08920.10	8.6e-48	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSPMET00000027146	-	4688	-	ENSPMEP00000018121	1343 (aa)	-	-
ENSPMET00000027089	-	4688	XM_015011198	ENSPMEP00000018068	1343 (aa)	XP_014866684	-
ENSPMET00000027151	-	4688	-	ENSPMEP00000032851	1343 (aa)	-	-
ENSPMET00000034050	-	4688	-	ENSPMEP00000018075	1343 (aa)	-	-
ENSPMET00000027164	-	4688	-	ENSPMEP00000032861	1343 (aa)	-	-
ENSPMET00000034056	-	4688	-	ENSPMEP00000018090	1343 (aa)	-	-
ENSPMET00000027183	-	4688	-	ENSPMEP00000018139	1343 (aa)	-	-

Gene Model

Click here to download ENSPMEG00000000446's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSPMEG00000000446's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSPMEG00000000446	sf3b1	98	93.394	ENSG00000115524	SF3B1	100	93.394	Homo_sapiens
ENSPMEG00000000446	sf3b1	98	98.632	ENSAPOG00000011894	sf3b1	100	98.632	Acanthochromis_polyacanthus
ENSPMEG00000000446	sf3b1	97	93.277	ENSAMEG00000013809	SF3B1	99	93.277	Ailuropoda_melanoleuca
ENSPMEG00000000446	sf3b1	98	97.567	ENSACIG00000020910	sf3b1	97	97.567	Amphilophus_citrinellus
ENSPMEG00000000446	sf3b1	98	98.632	ENSAOCG00000004478	sf3b1	100	98.632	Amphiprion_ocellaris
ENSPMEG00000000446	sf3b1	98	98.632	ENSAPEG00000012937	sf3b1	100	98.632	Amphiprion_percula
ENSPMEG00000000446	sf3b1	98	98.707	ENSATEG00000020435	sf3b1	100	98.707	Anabas_testudineus
ENSPMEG00000000446	sf3b1	97	93.721	ENSAPLG00000003993	SF3B1	99	93.721	Anas_platyrhynchos
ENSPMEG00000000446	sf3b1	98	93.541	ENSACAG00000009612	SF3B1	100	93.541	Anolis_carolinensis
ENSPMEG00000000446	sf3b1	98	93.394	ENSANAG00000021577	SF3B1	100	94.692	Aotus_nancymaae
ENSPMEG00000000446	sf3b1	98	97.490	ENSACLG00000023470	sf3b1	100	97.490	Astatotilapia_calliptera
ENSPMEG00000000446	sf3b1	98	96.887	ENSAMXG00000002219	sf3b1	100	96.887	Astyanax_mexicanus
ENSPMEG00000000446	sf3b1	98	93.394	ENSBTAG00000008915	SF3B1	100	93.394	Bos_taurus
ENSPMEG00000000446	sf3b1	97	64.502	WBGene00011605	sftb-1	99	64.649	Caenorhabditis_elegans
ENSPMEG00000000446	sf3b1	98	93.394	ENSCJAG00000003902	SF3B1	100	93.394	Callithrix_jacchus
ENSPMEG00000000446	sf3b1	98	93.394	ENSCAFG00000010826	SF3B1	100	93.394	Canis_familiaris
ENSPMEG00000000446	sf3b1	98	93.394	ENSCAFG00020004750	SF3B1	100	93.394	Canis_lupus_dingo
ENSPMEG00000000446	sf3b1	98	93.394	ENSCHIG00000015226	SF3B1	100	93.394	Capra_hircus
ENSPMEG00000000446	sf3b1	98	93.318	ENSTSYG00000009214	SF3B1	100	93.318	Carlito_syrichta
ENSPMEG00000000446	sf3b1	97	93.222	ENSCAPG00000006547	SF3B1	99	93.222	Cavia_aperea
ENSPMEG00000000446	sf3b1	97	93.344	ENSCPOG00000009353	SF3B1	100	93.344	Cavia_porcellus
ENSPMEG00000000446	sf3b1	98	93.394	ENSCCAG00000020506	SF3B1	100	93.394	Cebus_capucinus
ENSPMEG00000000446	sf3b1	98	93.394	ENSCATG00000035735	SF3B1	100	93.394	Cercocebus_atys
ENSPMEG00000000446	sf3b1	97	93.349	ENSCLAG00000014767	SF3B1	99	93.349	Chinchilla_lanigera
ENSPMEG00000000446	sf3b1	98	93.394	ENSCSAG00000011505	SF3B1	100	93.394	Chlorocebus_sabaeus
ENSPMEG00000000446	sf3b1	74	92.474	ENSCHOG00000009860	SF3B1	76	92.474	Choloepus_hoffmanni
ENSPMEG00000000446	sf3b1	98	93.688	ENSCPBG00000021902	SF3B1	99	94.781	Chrysemys_picta_bellii
ENSPMEG00000000446	sf3b1	67	78.299	ENSCING00000002558	-	99	78.738	Ciona_intestinalis
ENSPMEG00000000446	sf3b1	98	80.135	ENSCSAVG00000002559	-	99	80.135	Ciona_savignyi
ENSPMEG00000000446	sf3b1	98	93.394	ENSCANG00000029415	SF3B1	100	93.394	Colobus_angolensis_palliatus
ENSPMEG00000000446	sf3b1	98	93.394	ENSCGRG00001016990	Sf3b1	100	93.394	Cricetulus_griseus_chok1gshd
ENSPMEG00000000446	sf3b1	98	93.394	ENSCGRG00000005301	Sf3b1	100	93.394	Cricetulus_griseus_crigri
ENSPMEG00000000446	sf3b1	98	93.992	ENSCSEG00000003860	sf3b1	100	93.992	Cynoglossus_semilaevis
ENSPMEG00000000446	sf3b1	94	99.683	ENSCVAG00000003680	sf3b1	99	99.683	Cyprinodon_variegatus
ENSPMEG00000000446	sf3b1	98	96.122	ENSDARG00000056138	sf3b1	100	96.122	Danio_rerio
ENSPMEG00000000446	sf3b1	98	93.323	ENSDNOG00000011754	SF3B1	100	93.323	Dasypus_novemcinctus
ENSPMEG00000000446	sf3b1	97	91.431	ENSDORG00000002399	Sf3b1	100	91.354	Dipodomys_ordii
ENSPMEG00000000446	sf3b1	98	75.733	FBgn0031266	Sf3b1	100	75.733	Drosophila_melanogaster
ENSPMEG00000000446	sf3b1	81	92.301	ENSETEG00000009188	SF3B1	100	92.301	Echinops_telfairi
ENSPMEG00000000446	sf3b1	97	85.965	ENSEBUG00000004325	sf3b1	100	88.630	Eptatretus_burgeri
ENSPMEG00000000446	sf3b1	99	92.033	ENSEASG00005020159	SF3B1	99	92.033	Equus_asinus_asinus
ENSPMEG00000000446	sf3b1	99	92.033	ENSECAG00000021657	SF3B1	99	92.033	Equus_caballus
ENSPMEG00000000446	sf3b1	85	100.000	ENSEEUG00000000836	SF3B1	81	100.000	Erinaceus_europaeus
ENSPMEG00000000446	sf3b1	99	95.805	ENSELUG00000005977	sf3b1	99	95.805	Esox_lucius
ENSPMEG00000000446	sf3b1	98	93.394	ENSFCAG00000005038	SF3B1	100	93.394	Felis_catus
ENSPMEG00000000446	sf3b1	97	93.645	ENSFALG00000004281	SF3B1	99	93.645	Ficedula_albicollis
ENSPMEG00000000446	sf3b1	98	93.394	ENSFDAG00000017510	SF3B1	100	93.394	Fukomys_damarensis
ENSPMEG00000000446	sf3b1	98	98.403	ENSFHEG00000014333	sf3b1	100	98.403	Fundulus_heteroclitus
ENSPMEG00000000446	sf3b1	98	95.524	ENSGMOG00000006773	sf3b1	100	95.903	Gadus_morhua
ENSPMEG00000000446	sf3b1	98	93.764	ENSGALG00000008038	SF3B1	100	93.764	Gallus_gallus
ENSPMEG00000000446	sf3b1	96	99.691	ENSGAFG00000000704	sf3b1	100	99.691	Gambusia_affinis
ENSPMEG00000000446	sf3b1	98	96.887	ENSGACG00000008839	sf3b1	100	96.887	Gasterosteus_aculeatus
ENSPMEG00000000446	sf3b1	99	92.389	ENSGAGG00000017478	SF3B1	100	93.051	Gopherus_agassizii
ENSPMEG00000000446	sf3b1	98	87.872	ENSGGOG00000009264	SF3B1	99	88.141	Gorilla_gorilla
ENSPMEG00000000446	sf3b1	98	97.563	ENSHBUG00000007705	sf3b1	99	97.563	Haplochromis_burtoni
ENSPMEG00000000446	sf3b1	97	93.349	ENSHGLG00000008285	-	99	93.349	Heterocephalus_glaber_female
ENSPMEG00000000446	sf3b1	97	91.361	ENSHGLG00100005535	-	99	91.361	Heterocephalus_glaber_male
ENSPMEG00000000446	sf3b1	98	97.277	ENSHCOG00000016775	sf3b1	100	97.277	Hippocampus_comes
ENSPMEG00000000446	sf3b1	98	96.657	ENSIPUG00000013171	sf3b1	100	96.657	Ictalurus_punctatus
ENSPMEG00000000446	sf3b1	98	93.394	ENSSTOG00000011034	SF3B1	100	93.394	Ictidomys_tridecemlineatus
ENSPMEG00000000446	sf3b1	97	93.323	ENSJJAG00000010903	Sf3b1	99	93.323	Jaculus_jaculus
ENSPMEG00000000446	sf3b1	98	97.877	ENSKMAG00000004009	sf3b1	100	97.877	Kryptolebias_marmoratus
ENSPMEG00000000446	sf3b1	98	97.034	ENSLBEG00000022208	sf3b1	100	97.034	Labrus_bergylta
ENSPMEG00000000446	sf3b1	97	90.274	ENSLACG00000014832	SF3B1	99	90.350	Latimeria_chalumnae
ENSPMEG00000000446	sf3b1	98	95.310	ENSLOCG00000003899	sf3b1	100	95.310	Lepisosteus_oculatus
ENSPMEG00000000446	sf3b1	98	93.394	ENSLAFG00000001956	SF3B1	100	93.394	Loxodonta_africana
ENSPMEG00000000446	sf3b1	97	93.349	ENSMMUG00000022430	SF3B1	99	93.349	Macaca_mulatta
ENSPMEG00000000446	sf3b1	98	93.394	ENSMNEG00000042333	SF3B1	100	94.692	Macaca_nemestrina
ENSPMEG00000000446	sf3b1	92	88.638	ENSMLEG00000026141	SF3B1	98	89.185	Mandrillus_leucophaeus
ENSPMEG00000000446	sf3b1	98	98.479	ENSMAMG00000010241	sf3b1	100	98.479	Mastacembelus_armatus
ENSPMEG00000000446	sf3b1	98	97.490	ENSMZEG00005021254	sf3b1	100	97.490	Maylandia_zebra
ENSPMEG00000000446	sf3b1	97	93.109	ENSMGAG00000007017	SF3B1	99	93.109	Meleagris_gallopavo
ENSPMEG00000000446	sf3b1	97	89.144	ENSMAUG00000009071	Sf3b1	99	89.144	Mesocricetus_auratus
ENSPMEG00000000446	sf3b1	98	93.394	ENSMICG00000013879	SF3B1	100	93.394	Microcebus_murinus
ENSPMEG00000000446	sf3b1	97	89.076	ENSMOCG00000000455	Sf3b1	99	89.076	Microtus_ochrogaster
ENSPMEG00000000446	sf3b1	82	97.818	ENSMMOG00000000475	sf3b1	100	97.818	Mola_mola
ENSPMEG00000000446	sf3b1	98	92.938	ENSMODG00000012275	SF3B1	100	92.938	Monodelphis_domestica
ENSPMEG00000000446	sf3b1	98	98.251	ENSMALG00000017211	sf3b1	100	98.251	Monopterus_albus
ENSPMEG00000000446	sf3b1	98	93.394	MGP_CAROLIEiJ_G0014141	Sf3b1	100	93.394	Mus_caroli
ENSPMEG00000000446	sf3b1	98	93.394	ENSMUSG00000025982	Sf3b1	100	93.394	Mus_musculus
ENSPMEG00000000446	sf3b1	98	93.394	MGP_SPRETEiJ_G0014947	Sf3b1	100	93.394	Mus_spretus
ENSPMEG00000000446	sf3b1	98	93.394	ENSMPUG00000007799	SF3B1	100	93.394	Mustela_putorius_furo
ENSPMEG00000000446	sf3b1	98	92.255	ENSMLUG00000000840	SF3B1	100	92.255	Myotis_lucifugus
ENSPMEG00000000446	sf3b1	98	93.069	ENSNGAG00000021884	-	100	93.069	Nannospalax_galili
ENSPMEG00000000446	sf3b1	98	92.489	ENSNBRG00000015816	sf3b1	100	92.553	Neolamprologus_brichardi
ENSPMEG00000000446	sf3b1	98	93.394	ENSNLEG00000006861	SF3B1	100	93.394	Nomascus_leucogenys
ENSPMEG00000000446	sf3b1	68	99.717	ENSMEUG00000015848	-	66	99.717	Notamacropus_eugenii
ENSPMEG00000000446	sf3b1	98	80.906	ENSOPRG00000008596	SF3B1	100	81.055	Ochotona_princeps
ENSPMEG00000000446	sf3b1	98	93.394	ENSODEG00000011153	-	100	93.394	Octodon_degus
ENSPMEG00000000446	sf3b1	98	97.490	ENSONIG00000013758	sf3b1	100	97.490	Oreochromis_niloticus
ENSPMEG00000000446	sf3b1	81	95.325	ENSOCUG00000012722	-	96	95.325	Oryctolagus_cuniculus
ENSPMEG00000000446	sf3b1	98	98.175	ENSORLG00000020219	sf3b1	100	98.175	Oryzias_latipes
ENSPMEG00000000446	sf3b1	98	98.175	ENSORLG00020001746	sf3b1	100	98.175	Oryzias_latipes_hni
ENSPMEG00000000446	sf3b1	63	96.801	ENSORLG00015001759	sf3b1	98	96.801	Oryzias_latipes_hsok
ENSPMEG00000000446	sf3b1	98	98.403	ENSOMEG00000019231	sf3b1	100	98.403	Oryzias_melastigma
ENSPMEG00000000446	sf3b1	98	93.394	ENSOARG00000015374	SF3B1	100	93.394	Ovis_aries
ENSPMEG00000000446	sf3b1	98	93.394	ENSPPAG00000035007	SF3B1	100	93.394	Pan_paniscus
ENSPMEG00000000446	sf3b1	98	93.394	ENSPPRG00000009090	SF3B1	100	93.394	Panthera_pardus
ENSPMEG00000000446	sf3b1	98	93.394	ENSPTIG00000021557	SF3B1	100	93.394	Panthera_tigris_altaica
ENSPMEG00000000446	sf3b1	97	86.117	ENSPTRG00000012771	SF3B1	99	86.117	Pan_troglodytes
ENSPMEG00000000446	sf3b1	98	93.394	ENSPANG00000013417	SF3B1	100	93.394	Papio_anubis
ENSPMEG00000000446	sf3b1	98	95.903	ENSPKIG00000000784	sf3b1	100	95.903	Paramormyrops_kingsleyae
ENSPMEG00000000446	sf3b1	97	92.490	ENSPSIG00000017222	SF3B1	98	92.490	Pelodiscus_sinensis
ENSPMEG00000000446	sf3b1	89	97.565	ENSPMGG00000004330	sf3b1	99	97.565	Periophthalmus_magnuspinnatus
ENSPMEG00000000446	sf3b1	97	93.349	ENSPEMG00000010699	Sf3b1	100	93.349	Peromyscus_maniculatus_bairdii
ENSPMEG00000000446	sf3b1	98	88.813	ENSPMAG00000001311	sf3b1	100	89.116	Petromyzon_marinus
ENSPMEG00000000446	sf3b1	98	92.938	ENSPCIG00000010642	SF3B1	100	92.938	Phascolarctos_cinereus
ENSPMEG00000000446	sf3b1	98	99.924	ENSPFOG00000000073	sf3b1	100	99.924	Poecilia_formosa
ENSPMEG00000000446	sf3b1	98	99.924	ENSPLAG00000002293	sf3b1	100	99.924	Poecilia_latipinna
ENSPMEG00000000446	sf3b1	98	99.848	ENSPREG00000019652	sf3b1	100	99.848	Poecilia_reticulata
ENSPMEG00000000446	sf3b1	81	96.676	ENSPPYG00000013044	SF3B1	95	96.676	Pongo_abelii
ENSPMEG00000000446	sf3b1	98	93.242	ENSPCAG00000009292	SF3B1	100	93.242	Procavia_capensis
ENSPMEG00000000446	sf3b1	98	93.394	ENSPCOG00000024074	SF3B1	100	93.394	Propithecus_coquereli
ENSPMEG00000000446	sf3b1	98	93.394	ENSPVAG00000008302	SF3B1	100	93.394	Pteropus_vampyrus
ENSPMEG00000000446	sf3b1	98	97.414	ENSPNYG00000014939	sf3b1	100	97.414	Pundamilia_nyererei
ENSPMEG00000000446	sf3b1	98	96.963	ENSPNAG00000008288	sf3b1	100	96.963	Pygocentrus_nattereri
ENSPMEG00000000446	sf3b1	98	93.394	ENSRNOG00000013516	Sf3b1	100	93.394	Rattus_norvegicus
ENSPMEG00000000446	sf3b1	98	89.658	ENSRBIG00000026096	SF3B1	100	89.658	Rhinopithecus_bieti
ENSPMEG00000000446	sf3b1	98	93.394	ENSRROG00000031308	SF3B1	100	93.394	Rhinopithecus_roxellana
ENSPMEG00000000446	sf3b1	98	93.394	ENSSBOG00000020080	SF3B1	100	93.394	Saimiri_boliviensis_boliviensis
ENSPMEG00000000446	sf3b1	98	92.938	ENSSHAG00000017564	SF3B1	100	92.938	Sarcophilus_harrisii
ENSPMEG00000000446	sf3b1	98	96.353	ENSSFOG00015021535	sf3b1	100	96.353	Scleropages_formosus
ENSPMEG00000000446	sf3b1	98	97.496	ENSSMAG00000013977	sf3b1	99	97.496	Scophthalmus_maximus
ENSPMEG00000000446	sf3b1	98	98.631	ENSSDUG00000017422	sf3b1	100	98.631	Seriola_dumerili
ENSPMEG00000000446	sf3b1	98	98.707	ENSSLDG00000019495	sf3b1	100	98.707	Seriola_lalandi_dorsalis
ENSPMEG00000000446	sf3b1	73	98.415	ENSSARG00000007016	SF3B1	75	98.415	Sorex_araneus
ENSPMEG00000000446	sf3b1	98	93.384	ENSSPUG00000000410	SF3B1	100	93.384	Sphenodon_punctatus
ENSPMEG00000000446	sf3b1	99	98.116	ENSSPAG00000010451	sf3b1	99	98.116	Stegastes_partitus
ENSPMEG00000000446	sf3b1	89	93.095	ENSSSCG00000016075	SF3B1	100	94.692	Sus_scrofa
ENSPMEG00000000446	sf3b1	98	93.764	ENSTGUG00000010553	SF3B1	100	93.764	Taeniopygia_guttata
ENSPMEG00000000446	sf3b1	98	97.795	ENSTRUG00000015534	sf3b1	100	97.795	Takifugu_rubripes
ENSPMEG00000000446	sf3b1	82	97.004	ENSTBEG00000008714	SF3B1	93	97.004	Tupaia_belangeri
ENSPMEG00000000446	sf3b1	90	93.047	ENSTTRG00000003414	SF3B1	92	93.047	Tursiops_truncatus
ENSPMEG00000000446	sf3b1	92	83.604	ENSUAMG00000018506	SF3B1	99	97.368	Ursus_americanus
ENSPMEG00000000446	sf3b1	98	93.394	ENSUMAG00000020945	SF3B1	100	93.394	Ursus_maritimus
ENSPMEG00000000446	sf3b1	93	93.171	ENSVPAG00000005798	SF3B1	96	93.171	Vicugna_pacos
ENSPMEG00000000446	sf3b1	99	92.852	ENSVVUG00000025948	SF3B1	95	92.852	Vulpes_vulpes
ENSPMEG00000000446	sf3b1	98	91.951	ENSXETG00000013339	sf3b1	100	91.951	Xenopus_tropicalis
ENSPMEG00000000446	sf3b1	98	95.057	ENSXCOG00000018086	sf3b1	100	95.361	Xiphophorus_couchianus
ENSPMEG00000000446	sf3b1	98	99.696	ENSXMAG00000007369	sf3b1	100	99.696	Xiphophorus_maculatus