EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSPMEG00000000447 (Gene tree)
Gene ID: 106929140
Gene Symbol: ptrh1
Alias: -
Full Name: peptidyl-tRNA hydrolase 1 homolog
Gene Type: protein_coding
Species: Poecilia_mexicana
Status: putative
Strand: Plus strand
Length: 6389 bases
Position: chrKQ552075.1:176281-182669
Accession: 106929140
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSPMEP00000018379	Pept_tRNA_hydro	PF01195.19	4.4e-45	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSPMET00000034178	-	2655	XM_015005829	ENSPMEP00000018379	265 (aa)	XP_014861315	UPI000444099F

Gene Model

Click here to download ENSPMEG00000000447's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSPMEG00000000447's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSPMEG00000000447	ptrh1	77	52.683	ENSG00000187024	PTRH1	96	52.683	Homo_sapiens
ENSPMEG00000000447	ptrh1	99	80.989	ENSAPOG00000003014	-	93	80.989	Acanthochromis_polyacanthus
ENSPMEG00000000447	ptrh1	99	80.989	ENSAPOG00000000947	PTRH1	93	80.989	Acanthochromis_polyacanthus
ENSPMEG00000000447	ptrh1	99	80.989	ENSAPOG00000010719	ptrh1	93	80.989	Acanthochromis_polyacanthus
ENSPMEG00000000447	ptrh1	73	52.062	ENSAMEG00000016791	PTRH1	91	52.062	Ailuropoda_melanoleuca
ENSPMEG00000000447	ptrh1	74	84.772	ENSACIG00000006734	ptrh1	85	84.772	Amphilophus_citrinellus
ENSPMEG00000000447	ptrh1	97	82.879	ENSAOCG00000009725	ptrh1	93	81.749	Amphiprion_ocellaris
ENSPMEG00000000447	ptrh1	97	82.879	ENSAPEG00000020993	ptrh1	93	81.749	Amphiprion_percula
ENSPMEG00000000447	ptrh1	98	79.468	ENSATEG00000010003	ptrh1	94	79.468	Anabas_testudineus
ENSPMEG00000000447	ptrh1	77	54.146	ENSANAG00000025547	PTRH1	96	54.146	Aotus_nancymaae
ENSPMEG00000000447	ptrh1	99	77.372	ENSACLG00000025462	ptrh1	98	77.372	Astatotilapia_calliptera
ENSPMEG00000000447	ptrh1	93	60.887	ENSAMXG00000034117	ptrh1	91	60.887	Astyanax_mexicanus
ENSPMEG00000000447	ptrh1	59	54.140	ENSBTAG00000012736	PTRH1	51	54.140	Bos_taurus
ENSPMEG00000000447	ptrh1	73	55.155	ENSCJAG00000019841	PTRH1	74	56.296	Callithrix_jacchus
ENSPMEG00000000447	ptrh1	75	53.234	ENSCAFG00000020123	PTRH1	93	53.234	Canis_familiaris
ENSPMEG00000000447	ptrh1	75	53.500	ENSCAFG00020015776	PTRH1	90	53.500	Canis_lupus_dingo
ENSPMEG00000000447	ptrh1	72	57.812	ENSCHIG00000008188	PTRH1	90	57.812	Capra_hircus
ENSPMEG00000000447	ptrh1	52	56.204	ENSCAPG00000015926	PTRH1	98	56.204	Cavia_aperea
ENSPMEG00000000447	ptrh1	68	58.011	ENSCPOG00000023968	PTRH1	85	58.011	Cavia_porcellus
ENSPMEG00000000447	ptrh1	78	52.404	ENSCCAG00000023134	PTRH1	97	52.404	Cebus_capucinus
ENSPMEG00000000447	ptrh1	77	52.195	ENSCATG00000042852	PTRH1	96	52.195	Cercocebus_atys
ENSPMEG00000000447	ptrh1	72	56.250	ENSCLAG00000011155	PTRH1	90	56.250	Chinchilla_lanigera
ENSPMEG00000000447	ptrh1	77	52.195	ENSCSAG00000013748	PTRH1	92	49.550	Chlorocebus_sabaeus
ENSPMEG00000000447	ptrh1	63	55.090	ENSCPBG00000025207	PTRH1	95	55.090	Chrysemys_picta_bellii
ENSPMEG00000000447	ptrh1	84	49.550	ENSCANG00000039856	PTRH1	98	49.550	Colobus_angolensis_palliatus
ENSPMEG00000000447	ptrh1	74	55.897	ENSCGRG00001013108	Ptrh1	94	55.897	Cricetulus_griseus_chok1gshd
ENSPMEG00000000447	ptrh1	69	57.065	ENSCGRG00000016553	Ptrh1	99	57.065	Cricetulus_griseus_crigri
ENSPMEG00000000447	ptrh1	94	70.155	ENSCSEG00000010332	ptrh1	93	70.155	Cynoglossus_semilaevis
ENSPMEG00000000447	ptrh1	98	80.769	ENSCVAG00000010701	ptrh1	96	80.769	Cyprinodon_variegatus
ENSPMEG00000000447	ptrh1	97	57.031	ENSDARG00000098206	ptrh1	85	68.528	Danio_rerio
ENSPMEG00000000447	ptrh1	66	59.659	ENSDNOG00000024194	PTRH1	82	59.659	Dasypus_novemcinctus
ENSPMEG00000000447	ptrh1	70	56.684	ENSDORG00000013321	Ptrh1	87	56.684	Dipodomys_ordii
ENSPMEG00000000447	ptrh1	72	56.250	ENSEASG00005020466	PTRH1	90	56.250	Equus_asinus_asinus
ENSPMEG00000000447	ptrh1	77	53.171	ENSECAG00000007615	PTRH1	75	53.171	Equus_caballus
ENSPMEG00000000447	ptrh1	98	65.517	ENSELUG00000015467	ptrh1	96	65.517	Esox_lucius
ENSPMEG00000000447	ptrh1	69	55.978	ENSFCAG00000001483	PTRH1	86	55.978	Felis_catus
ENSPMEG00000000447	ptrh1	66	52.299	ENSFALG00000001352	PTRH1	83	52.299	Ficedula_albicollis
ENSPMEG00000000447	ptrh1	73	56.477	ENSFDAG00000020077	PTRH1	95	56.477	Fukomys_damarensis
ENSPMEG00000000447	ptrh1	92	84.146	ENSFHEG00000010590	ptrh1	99	82.443	Fundulus_heteroclitus
ENSPMEG00000000447	ptrh1	54	67.133	ENSGMOG00000009801	PTRH1	100	67.133	Gadus_morhua
ENSPMEG00000000447	ptrh1	100	94.340	ENSGAFG00000016215	ptrh1	100	94.340	Gambusia_affinis
ENSPMEG00000000447	ptrh1	76	80.597	ENSGACG00000014682	ptrh1	91	83.333	Gasterosteus_aculeatus
ENSPMEG00000000447	ptrh1	80	55.924	ENSGAGG00000022860	PTRH1	94	55.924	Gopherus_agassizii
ENSPMEG00000000447	ptrh1	77	52.195	ENSGGOG00000011033	PTRH1	96	52.195	Gorilla_gorilla
ENSPMEG00000000447	ptrh1	99	77.007	ENSHBUG00000020824	ptrh1	98	77.007	Haplochromis_burtoni
ENSPMEG00000000447	ptrh1	73	56.995	ENSHGLG00000019147	PTRH1	94	56.995	Heterocephalus_glaber_female
ENSPMEG00000000447	ptrh1	73	53.368	ENSHGLG00100003681	PTRH1	96	53.368	Heterocephalus_glaber_male
ENSPMEG00000000447	ptrh1	88	65.948	ENSHCOG00000014772	ptrh1	92	64.198	Hippocampus_comes
ENSPMEG00000000447	ptrh1	94	61.600	ENSIPUG00000015364	ptrh1	92	63.713	Ictalurus_punctatus
ENSPMEG00000000447	ptrh1	63	59.639	ENSSTOG00000008942	PTRH1	90	54.167	Ictidomys_tridecemlineatus
ENSPMEG00000000447	ptrh1	72	56.250	ENSJJAG00000014338	Ptrh1	93	56.250	Jaculus_jaculus
ENSPMEG00000000447	ptrh1	99	78.327	ENSKMAG00000003253	ptrh1	95	78.327	Kryptolebias_marmoratus
ENSPMEG00000000447	ptrh1	72	58.031	ENSLACG00000016741	PTRH1	80	58.031	Latimeria_chalumnae
ENSPMEG00000000447	ptrh1	69	54.054	ENSLAFG00000021934	PTRH1	91	54.054	Loxodonta_africana
ENSPMEG00000000447	ptrh1	77	52.195	ENSMFAG00000001700	PTRH1	96	52.195	Macaca_fascicularis
ENSPMEG00000000447	ptrh1	77	52.195	ENSMMUG00000016424	PTRH1	96	52.195	Macaca_mulatta
ENSPMEG00000000447	ptrh1	77	52.195	ENSMNEG00000033061	PTRH1	92	49.550	Macaca_nemestrina
ENSPMEG00000000447	ptrh1	97	79.070	ENSMAMG00000017386	ptrh1	94	79.070	Mastacembelus_armatus
ENSPMEG00000000447	ptrh1	89	76.613	ENSMZEG00005020001	ptrh1	98	76.613	Maylandia_zebra
ENSPMEG00000000447	ptrh1	74	56.410	ENSMAUG00000006266	Ptrh1	94	56.410	Mesocricetus_auratus
ENSPMEG00000000447	ptrh1	72	55.670	ENSMICG00000005611	PTRH1	90	55.670	Microcebus_murinus
ENSPMEG00000000447	ptrh1	72	56.250	ENSMOCG00000013992	Ptrh1	94	56.250	Microtus_ochrogaster
ENSPMEG00000000447	ptrh1	98	76.426	ENSMMOG00000014747	ptrh1	92	77.567	Mola_mola
ENSPMEG00000000447	ptrh1	73	55.440	ENSMODG00000005503	PTRH1	89	55.440	Monodelphis_domestica
ENSPMEG00000000447	ptrh1	58	77.564	ENSMALG00000005392	ptrh1	91	77.564	Monopterus_albus
ENSPMEG00000000447	ptrh1	69	58.791	MGP_CAROLIEiJ_G0023450	Ptrh1	89	58.791	Mus_caroli
ENSPMEG00000000447	ptrh1	69	58.791	ENSMUSG00000053746	Ptrh1	89	58.791	Mus_musculus
ENSPMEG00000000447	ptrh1	69	58.791	MGP_PahariEiJ_G0024907	Ptrh1	89	58.791	Mus_pahari
ENSPMEG00000000447	ptrh1	69	58.242	MGP_SPRETEiJ_G0024367	Ptrh1	89	58.242	Mus_spretus
ENSPMEG00000000447	ptrh1	73	53.571	ENSMPUG00000013790	PTRH1	89	53.571	Mustela_putorius_furo
ENSPMEG00000000447	ptrh1	72	52.709	ENSMLUG00000013454	PTRH1	91	52.970	Myotis_lucifugus
ENSPMEG00000000447	ptrh1	74	55.385	ENSNGAG00000014008	Ptrh1	96	55.385	Nannospalax_galili
ENSPMEG00000000447	ptrh1	99	77.007	ENSNBRG00000015590	ptrh1	98	77.007	Neolamprologus_brichardi
ENSPMEG00000000447	ptrh1	77	51.707	ENSNLEG00000017468	PTRH1	96	51.707	Nomascus_leucogenys
ENSPMEG00000000447	ptrh1	72	55.729	ENSODEG00000004012	PTRH1	91	55.729	Octodon_degus
ENSPMEG00000000447	ptrh1	92	76.562	ENSONIG00000013912	ptrh1	98	78.516	Oreochromis_niloticus
ENSPMEG00000000447	ptrh1	82	51.835	ENSOANG00000011891	PTRH1	93	51.835	Ornithorhynchus_anatinus
ENSPMEG00000000447	ptrh1	72	55.729	ENSOCUG00000006894	PTRH1	83	55.729	Oryctolagus_cuniculus
ENSPMEG00000000447	ptrh1	79	53.333	ENSOGAG00000008094	PTRH1	99	53.333	Otolemur_garnettii
ENSPMEG00000000447	ptrh1	72	52.736	ENSOARG00000011808	PTRH1	90	52.736	Ovis_aries
ENSPMEG00000000447	ptrh1	77	52.683	ENSPPAG00000041782	PTRH1	96	52.683	Pan_paniscus
ENSPMEG00000000447	ptrh1	72	55.208	ENSPPRG00000007889	PTRH1	90	55.208	Panthera_pardus
ENSPMEG00000000447	ptrh1	77	52.683	ENSPTRG00000021394	PTRH1	96	52.683	Pan_troglodytes
ENSPMEG00000000447	ptrh1	84	42.920	ENSPANG00000031755	PTRH1	98	42.920	Papio_anubis
ENSPMEG00000000447	ptrh1	89	58.723	ENSPKIG00000005449	ptrh1	76	58.723	Paramormyrops_kingsleyae
ENSPMEG00000000447	ptrh1	77	53.922	ENSPSIG00000013828	PTRH1	74	53.922	Pelodiscus_sinensis
ENSPMEG00000000447	ptrh1	83	61.712	ENSPMGG00000002148	ptrh1	87	57.812	Periophthalmus_magnuspinnatus
ENSPMEG00000000447	ptrh1	63	62.275	ENSPEMG00000014360	Ptrh1	94	57.949	Peromyscus_maniculatus_bairdii
ENSPMEG00000000447	ptrh1	100	100.000	ENSPFOG00000003715	ptrh1	100	100.000	Poecilia_formosa
ENSPMEG00000000447	ptrh1	100	93.585	ENSPLAG00000023354	ptrh1	100	93.585	Poecilia_latipinna
ENSPMEG00000000447	ptrh1	100	97.358	ENSPREG00000012612	ptrh1	100	97.358	Poecilia_reticulata
ENSPMEG00000000447	ptrh1	77	49.268	ENSPPYG00000019628	PTRH1	89	49.268	Pongo_abelii
ENSPMEG00000000447	ptrh1	69	57.609	ENSPCAG00000007016	PTRH1	86	57.609	Procavia_capensis
ENSPMEG00000000447	ptrh1	72	55.670	ENSPCOG00000014541	PTRH1	90	55.670	Propithecus_coquereli
ENSPMEG00000000447	ptrh1	70	57.838	ENSPVAG00000000954	PTRH1	86	57.838	Pteropus_vampyrus
ENSPMEG00000000447	ptrh1	98	78.491	ENSPNYG00000007789	ptrh1	95	78.491	Pundamilia_nyererei
ENSPMEG00000000447	ptrh1	97	61.240	ENSPNAG00000029930	ptrh1	95	61.240	Pygocentrus_nattereri
ENSPMEG00000000447	ptrh1	69	58.791	ENSRNOG00000049034	Ptrh1	89	58.791	Rattus_norvegicus
ENSPMEG00000000447	ptrh1	84	50.000	ENSRBIG00000027290	PTRH1	98	50.000	Rhinopithecus_bieti
ENSPMEG00000000447	ptrh1	84	50.000	ENSRROG00000028799	PTRH1	92	50.000	Rhinopithecus_roxellana
ENSPMEG00000000447	ptrh1	67	33.333	YHR189W	PTH1	97	33.333	Saccharomyces_cerevisiae
ENSPMEG00000000447	ptrh1	77	52.195	ENSSBOG00000026699	PTRH1	90	52.195	Saimiri_boliviensis_boliviensis
ENSPMEG00000000447	ptrh1	72	54.822	ENSSHAG00000018238	PTRH1	96	54.822	Sarcophilus_harrisii
ENSPMEG00000000447	ptrh1	78	63.942	ENSSFOG00015007053	ptrh1	84	70.588	Scleropages_formosus
ENSPMEG00000000447	ptrh1	76	77.778	ENSSMAG00000016747	ptrh1	88	77.778	Scophthalmus_maximus
ENSPMEG00000000447	ptrh1	89	76.050	ENSSDUG00000013471	ptrh1	96	79.832	Seriola_dumerili
ENSPMEG00000000447	ptrh1	75	75.743	ENSSLDG00000024662	ptrh1	89	80.198	Seriola_lalandi_dorsalis
ENSPMEG00000000447	ptrh1	91	47.934	ENSSPUG00000000040	PTRH1	96	47.934	Sphenodon_punctatus
ENSPMEG00000000447	ptrh1	87	83.550	ENSSPAG00000003298	ptrh1	98	81.667	Stegastes_partitus
ENSPMEG00000000447	ptrh1	72	55.729	ENSSSCG00000005615	PTRH1	90	55.729	Sus_scrofa
ENSPMEG00000000447	ptrh1	51	58.955	ENSTGUG00000003648	PTRH1	100	58.955	Taeniopygia_guttata
ENSPMEG00000000447	ptrh1	93	77.108	ENSTRUG00000019801	PTRH1	92	76.285	Takifugu_rubripes
ENSPMEG00000000447	ptrh1	83	76.233	ENSTNIG00000016735	ptrh1	99	76.233	Tetraodon_nigroviridis
ENSPMEG00000000447	ptrh1	72	53.125	ENSTTRG00000016458	PTRH1	90	53.125	Tursiops_truncatus
ENSPMEG00000000447	ptrh1	73	55.155	ENSUAMG00000023948	-	86	55.155	Ursus_americanus
ENSPMEG00000000447	ptrh1	69	44.505	ENSVPAG00000001805	PTRH1	100	44.505	Vicugna_pacos
ENSPMEG00000000447	ptrh1	72	55.497	ENSVVUG00000013198	PTRH1	86	55.497	Vulpes_vulpes
ENSPMEG00000000447	ptrh1	67	58.192	ENSXETG00000009980	ptrh1	95	58.192	Xenopus_tropicalis
ENSPMEG00000000447	ptrh1	78	93.204	ENSXCOG00000011498	ptrh1	88	93.204	Xiphophorus_couchianus
ENSPMEG00000000447	ptrh1	100	95.849	ENSXMAG00000009256	ptrh1	100	95.849	Xiphophorus_maculatus