EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSPMEG00000000720 (Gene tree)
Gene ID: 106917273
Gene Symbol: ppargc1a
Alias: -
Full Name: PPARG coactivator 1 alpha
Gene Type: protein_coding
Species: Poecilia_mexicana
Status: putative
Strand: Plus strand
Length: 47483 bases
Position: chrKQ551229.1:297685-345167
Accession: 106917273
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSPMEP00000034190	RRM_1	PF00076.22	2.9e-06	1	1
ENSPMEP00000020141	RRM_1	PF00076.22	4.4e-06	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSPMET00000029689	-	2778	XM_014986096	ENSPMEP00000034190	925 (aa)	XP_014841582	-
ENSPMET00000029709	-	7490	XM_014986093	ENSPMEP00000020141	1274 (aa)	XP_014841579	-

Gene Model

Click here to download ENSPMEG00000000720's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSPMEG00000000720's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSPMEG00000000720	ppargc1a	79	79.878	ENSG00000109819	PPARGC1A	86	88.000	Homo_sapiens
ENSPMEG00000000720	ppargc1a	93	95.565	ENSAPOG00000018632	ppargc1a	99	96.250	Acanthochromis_polyacanthus
ENSPMEG00000000720	ppargc1a	100	49.624	ENSAMEG00000010421	PPARGC1A	88	80.114	Ailuropoda_melanoleuca
ENSPMEG00000000720	ppargc1a	92	94.332	ENSACIG00000009732	ppargc1a	100	95.417	Amphilophus_citrinellus
ENSPMEG00000000720	ppargc1a	93	95.565	ENSAOCG00000006754	ppargc1a	99	96.250	Amphiprion_ocellaris
ENSPMEG00000000720	ppargc1a	92	95.510	ENSAPEG00000022574	ppargc1a	99	96.250	Amphiprion_percula
ENSPMEG00000000720	ppargc1a	92	94.332	ENSATEG00000016702	ppargc1a	100	95.000	Anabas_testudineus
ENSPMEG00000000720	ppargc1a	92	80.606	ENSAPLG00000005303	PPARGC1A	94	74.429	Anas_platyrhynchos
ENSPMEG00000000720	ppargc1a	100	49.112	ENSACAG00000000741	PPARGC1A	78	78.977	Anolis_carolinensis
ENSPMEG00000000720	ppargc1a	100	50.905	ENSANAG00000035930	PPARGC1A	53	76.316	Aotus_nancymaae
ENSPMEG00000000720	ppargc1a	95	94.465	ENSACLG00000001002	ppargc1a	99	95.417	Astatotilapia_calliptera
ENSPMEG00000000720	ppargc1a	91	86.301	ENSAMXG00000002461	ppargc1a	88	86.747	Astyanax_mexicanus
ENSPMEG00000000720	ppargc1a	100	50.857	ENSBTAG00000017024	PPARGC1A	96	71.983	Bos_taurus
ENSPMEG00000000720	ppargc1a	100	49.946	ENSCJAG00000013024	PPARGC1A	96	70.940	Callithrix_jacchus
ENSPMEG00000000720	ppargc1a	100	48.936	ENSCAFG00000016519	PPARGC1A	88	80.114	Canis_familiaris
ENSPMEG00000000720	ppargc1a	97	48.035	ENSCAFG00020027242	PPARGC1A	87	80.114	Canis_lupus_dingo
ENSPMEG00000000720	ppargc1a	100	51.123	ENSCHIG00000015991	PPARGC1A	96	71.983	Capra_hircus
ENSPMEG00000000720	ppargc1a	79	79.878	ENSTSYG00000010439	PPARGC1A	88	80.114	Carlito_syrichta
ENSPMEG00000000720	ppargc1a	87	79.268	ENSCAPG00000005150	PPARGC1A	91	69.268	Cavia_aperea
ENSPMEG00000000720	ppargc1a	90	79.268	ENSCPOG00000001518	PPARGC1A	96	70.690	Cavia_porcellus
ENSPMEG00000000720	ppargc1a	100	50.745	ENSCCAG00000024681	PPARGC1A	96	70.940	Cebus_capucinus
ENSPMEG00000000720	ppargc1a	79	79.878	ENSCATG00000032575	PPARGC1A	96	70.940	Cercocebus_atys
ENSPMEG00000000720	ppargc1a	100	49.412	ENSCLAG00000002058	PPARGC1A	96	71.983	Chinchilla_lanigera
ENSPMEG00000000720	ppargc1a	100	49.147	ENSCSAG00000016575	PPARGC1A	96	70.940	Chlorocebus_sabaeus
ENSPMEG00000000720	ppargc1a	100	51.012	ENSCANG00000033426	PPARGC1A	96	70.940	Colobus_angolensis_palliatus
ENSPMEG00000000720	ppargc1a	100	48.449	ENSCGRG00001015534	Ppargc1a	96	71.121	Cricetulus_griseus_chok1gshd
ENSPMEG00000000720	ppargc1a	100	48.449	ENSCGRG00000000200	Ppargc1a	96	71.121	Cricetulus_griseus_crigri
ENSPMEG00000000720	ppargc1a	91	96.537	ENSCSEG00000006884	ppargc1a	97	96.537	Cynoglossus_semilaevis
ENSPMEG00000000720	ppargc1a	100	83.027	ENSCVAG00000016547	ppargc1a	100	84.658	Cyprinodon_variegatus
ENSPMEG00000000720	ppargc1a	100	51.717	ENSDNOG00000041106	PPARGC1A	96	72.414	Dasypus_novemcinctus
ENSPMEG00000000720	ppargc1a	91	78.049	ENSDORG00000016276	Ppargc1a	86	78.409	Dipodomys_ordii
ENSPMEG00000000720	ppargc1a	92	79.878	ENSEASG00005007984	PPARGC1A	88	80.114	Equus_asinus_asinus
ENSPMEG00000000720	ppargc1a	91	79.878	ENSECAG00000009164	PPARGC1A	85	80.114	Equus_caballus
ENSPMEG00000000720	ppargc1a	98	50.535	ENSEEUG00000009219	PPARGC1A	96	71.296	Erinaceus_europaeus
ENSPMEG00000000720	ppargc1a	91	90.598	ENSELUG00000017027	ppargc1a	100	59.985	Esox_lucius
ENSPMEG00000000720	ppargc1a	100	51.180	ENSFCAG00000000043	PPARGC1A	86	79.545	Felis_catus
ENSPMEG00000000720	ppargc1a	99	48.751	ENSFALG00000009211	PPARGC1A	67	79.545	Ficedula_albicollis
ENSPMEG00000000720	ppargc1a	64	77.439	ENSFDAG00000005659	PPARGC1A	96	71.552	Fukomys_damarensis
ENSPMEG00000000720	ppargc1a	100	90.745	ENSFHEG00000021990	ppargc1a	98	97.917	Fundulus_heteroclitus
ENSPMEG00000000720	ppargc1a	100	51.130	ENSGALG00000042851	PPARGC1A	94	75.342	Gallus_gallus
ENSPMEG00000000720	ppargc1a	100	93.417	ENSGAFG00000015514	ppargc1a	100	97.551	Gambusia_affinis
ENSPMEG00000000720	ppargc1a	99	49.630	ENSGAGG00000007043	PPARGC1A	94	72.770	Gopherus_agassizii
ENSPMEG00000000720	ppargc1a	100	49.894	ENSGGOG00000009810	PPARGC1A	96	70.940	Gorilla_gorilla
ENSPMEG00000000720	ppargc1a	97	95.105	ENSHBUG00000005269	ppargc1a	100	95.833	Haplochromis_burtoni
ENSPMEG00000000720	ppargc1a	90	77.439	ENSHGLG00000007022	PPARGC1A	96	71.296	Heterocephalus_glaber_female
ENSPMEG00000000720	ppargc1a	92	77.439	ENSHGLG00100000133	PPARGC1A	88	77.841	Heterocephalus_glaber_male
ENSPMEG00000000720	ppargc1a	100	70.563	ENSHCOG00000014886	ppargc1a	94	91.667	Hippocampus_comes
ENSPMEG00000000720	ppargc1a	95	97.368	ENSIPUG00000020313	ppargc1a	77	51.680	Ictalurus_punctatus
ENSPMEG00000000720	ppargc1a	100	48.132	ENSSTOG00000012522	PPARGC1A	96	71.121	Ictidomys_tridecemlineatus
ENSPMEG00000000720	ppargc1a	100	80.773	ENSKMAG00000005390	ppargc1a	95	96.053	Kryptolebias_marmoratus
ENSPMEG00000000720	ppargc1a	96	91.608	ENSLBEG00000019562	ppargc1a	99	95.000	Labrus_bergylta
ENSPMEG00000000720	ppargc1a	92	78.462	ENSLACG00000014054	PPARGC1A	94	76.098	Latimeria_chalumnae
ENSPMEG00000000720	ppargc1a	71	56.042	ENSLOCG00000012350	ppargc1a	52	84.000	Lepisosteus_oculatus
ENSPMEG00000000720	ppargc1a	100	51.238	ENSLAFG00000012981	PPARGC1A	96	71.552	Loxodonta_africana
ENSPMEG00000000720	ppargc1a	100	49.787	ENSMFAG00000000534	PPARGC1A	96	70.940	Macaca_fascicularis
ENSPMEG00000000720	ppargc1a	92	79.375	ENSMMUG00000001844	PPARGC1A	96	70.940	Macaca_mulatta
ENSPMEG00000000720	ppargc1a	100	49.680	ENSMNEG00000028682	PPARGC1A	96	70.940	Macaca_nemestrina
ENSPMEG00000000720	ppargc1a	100	49.735	ENSMLEG00000034233	PPARGC1A	96	70.940	Mandrillus_leucophaeus
ENSPMEG00000000720	ppargc1a	100	78.265	ENSMAMG00000005531	ppargc1a	94	95.833	Mastacembelus_armatus
ENSPMEG00000000720	ppargc1a	97	94.755	ENSMZEG00005001739	ppargc1a	100	78.947	Maylandia_zebra
ENSPMEG00000000720	ppargc1a	92	81.818	ENSMGAG00000012485	PPARGC1A	94	74.886	Meleagris_gallopavo
ENSPMEG00000000720	ppargc1a	64	78.049	ENSMAUG00000011811	Ppargc1a	96	71.121	Mesocricetus_auratus
ENSPMEG00000000720	ppargc1a	100	48.934	ENSMICG00000015390	PPARGC1A	88	80.114	Microcebus_murinus
ENSPMEG00000000720	ppargc1a	100	48.397	ENSMOCG00000008765	Ppargc1a	96	70.690	Microtus_ochrogaster
ENSPMEG00000000720	ppargc1a	100	75.351	ENSMMOG00000011847	ppargc1a	95	94.167	Mola_mola
ENSPMEG00000000720	ppargc1a	100	51.551	ENSMODG00000000549	PPARGC1A	94	75.799	Monodelphis_domestica
ENSPMEG00000000720	ppargc1a	93	93.145	ENSMALG00000004625	ppargc1a	88	93.750	Monopterus_albus
ENSPMEG00000000720	ppargc1a	100	48.767	MGP_CAROLIEiJ_G0027213	Ppargc1a	96	69.397	Mus_caroli
ENSPMEG00000000720	ppargc1a	100	49.089	ENSMUSG00000029167	Ppargc1a	96	70.259	Mus_musculus
ENSPMEG00000000720	ppargc1a	100	48.124	MGP_PahariEiJ_G0016995	Ppargc1a	94	72.603	Mus_pahari
ENSPMEG00000000720	ppargc1a	100	48.982	MGP_SPRETEiJ_G0028208	Ppargc1a	96	70.259	Mus_spretus
ENSPMEG00000000720	ppargc1a	100	49.409	ENSMPUG00000016736	PPARGC1A	94	74.886	Mustela_putorius_furo
ENSPMEG00000000720	ppargc1a	100	51.665	ENSMLUG00000016307	PPARGC1A	86	79.545	Myotis_lucifugus
ENSPMEG00000000720	ppargc1a	92	78.049	ENSNGAG00000015090	Ppargc1a	94	73.059	Nannospalax_galili
ENSPMEG00000000720	ppargc1a	88	94.737	ENSNBRG00000023403	ppargc1a	99	95.833	Neolamprologus_brichardi
ENSPMEG00000000720	ppargc1a	79	79.878	ENSNLEG00000016760	PPARGC1A	96	70.940	Nomascus_leucogenys
ENSPMEG00000000720	ppargc1a	63	78.659	ENSOPRG00000012899	PPARGC1A	88	78.977	Ochotona_princeps
ENSPMEG00000000720	ppargc1a	100	72.532	ENSONIG00000007635	ppargc1a	99	88.793	Oreochromis_niloticus
ENSPMEG00000000720	ppargc1a	100	50.915	ENSOANG00000006680	PPARGC1A	89	77.957	Ornithorhynchus_anatinus
ENSPMEG00000000720	ppargc1a	100	48.235	ENSOCUG00000014668	PPARGC1A	96	69.828	Oryctolagus_cuniculus
ENSPMEG00000000720	ppargc1a	100	87.338	ENSORLG00000004788	ppargc1a	99	95.833	Oryzias_latipes
ENSPMEG00000000720	ppargc1a	100	90.554	ENSORLG00020014690	ppargc1a	95	95.833	Oryzias_latipes_hni
ENSPMEG00000000720	ppargc1a	100	90.228	ENSORLG00015012206	ppargc1a	99	97.368	Oryzias_latipes_hsok
ENSPMEG00000000720	ppargc1a	92	94.737	ENSOMEG00000000670	ppargc1a	100	95.417	Oryzias_melastigma
ENSPMEG00000000720	ppargc1a	100	50.899	ENSOGAG00000014559	PPARGC1A	88	78.409	Otolemur_garnettii
ENSPMEG00000000720	ppargc1a	100	51.016	ENSOARG00000005581	PPARGC1A	86	79.545	Ovis_aries
ENSPMEG00000000720	ppargc1a	79	79.878	ENSPPAG00000034694	PPARGC1A	96	70.513	Pan_paniscus
ENSPMEG00000000720	ppargc1a	100	51.180	ENSPPRG00000001711	PPARGC1A	86	79.545	Panthera_pardus
ENSPMEG00000000720	ppargc1a	100	51.180	ENSPTIG00000007378	PPARGC1A	86	79.545	Panthera_tigris_altaica
ENSPMEG00000000720	ppargc1a	79	79.878	ENSPTRG00000015954	PPARGC1A	96	70.940	Pan_troglodytes
ENSPMEG00000000720	ppargc1a	100	49.470	ENSPANG00000005420	PPARGC1A	96	70.940	Papio_anubis
ENSPMEG00000000720	ppargc1a	83	74.468	ENSPKIG00000002531	ppargc1a	73	74.468	Paramormyrops_kingsleyae
ENSPMEG00000000720	ppargc1a	100	50.428	ENSPSIG00000011790	PPARGC1A	83	80.114	Pelodiscus_sinensis
ENSPMEG00000000720	ppargc1a	69	87.500	ENSPMGG00000019204	ppargc1a	92	87.917	Periophthalmus_magnuspinnatus
ENSPMEG00000000720	ppargc1a	100	50.534	ENSPEMG00000010892	Ppargc1a	96	71.121	Peromyscus_maniculatus_bairdii
ENSPMEG00000000720	ppargc1a	100	51.377	ENSPCIG00000015835	PPARGC1A	94	75.799	Phascolarctos_cinereus
ENSPMEG00000000720	ppargc1a	100	93.904	ENSPFOG00000001263	ppargc1a	99	97.279	Poecilia_formosa
ENSPMEG00000000720	ppargc1a	92	99.590	ENSPLAG00000002827	ppargc1a	98	99.583	Poecilia_latipinna
ENSPMEG00000000720	ppargc1a	100	97.274	ENSPREG00000019171	ppargc1a	99	99.583	Poecilia_reticulata
ENSPMEG00000000720	ppargc1a	100	49.200	ENSPPYG00000014640	PPARGC1A	96	70.940	Pongo_abelii
ENSPMEG00000000720	ppargc1a	100	50.591	ENSPCAG00000016308	PPARGC1A	96	71.552	Procavia_capensis
ENSPMEG00000000720	ppargc1a	100	50.107	ENSPCOG00000022858	PPARGC1A	88	80.114	Propithecus_coquereli
ENSPMEG00000000720	ppargc1a	92	78.659	ENSPVAG00000004965	PPARGC1A	86	78.977	Pteropus_vampyrus
ENSPMEG00000000720	ppargc1a	97	95.105	ENSPNYG00000006846	ppargc1a	100	95.833	Pundamilia_nyererei
ENSPMEG00000000720	ppargc1a	93	96.053	ENSPNAG00000010393	ppargc1a	99	86.809	Pygocentrus_nattereri
ENSPMEG00000000720	ppargc1a	100	48.875	ENSRNOG00000004473	Ppargc1a	96	70.259	Rattus_norvegicus
ENSPMEG00000000720	ppargc1a	100	50.905	ENSRBIG00000032333	PPARGC1A	96	70.940	Rhinopithecus_bieti
ENSPMEG00000000720	ppargc1a	100	50.905	ENSRROG00000010419	PPARGC1A	96	70.940	Rhinopithecus_roxellana
ENSPMEG00000000720	ppargc1a	100	50.905	ENSSBOG00000006423	PPARGC1A	96	70.940	Saimiri_boliviensis_boliviensis
ENSPMEG00000000720	ppargc1a	100	51.453	ENSSHAG00000010033	PPARGC1A	91	75.799	Sarcophilus_harrisii
ENSPMEG00000000720	ppargc1a	90	76.106	ENSSFOG00015001633	ppargc1a	84	73.109	Scleropages_formosus
ENSPMEG00000000720	ppargc1a	60	69.959	ENSSFOG00015018522	ppargc1a	68	75.566	Scleropages_formosus
ENSPMEG00000000720	ppargc1a	97	89.510	ENSSMAG00000011571	ppargc1a	96	95.614	Scophthalmus_maximus
ENSPMEG00000000720	ppargc1a	91	96.970	ENSSDUG00000007408	ppargc1a	97	96.970	Seriola_dumerili
ENSPMEG00000000720	ppargc1a	100	80.968	ENSSLDG00000006987	ppargc1a	93	95.833	Seriola_lalandi_dorsalis
ENSPMEG00000000720	ppargc1a	88	76.800	ENSSARG00000000575	PPARGC1A	94	71.233	Sorex_araneus
ENSPMEG00000000720	ppargc1a	100	49.732	ENSSPUG00000013556	PPARGC1A	94	74.886	Sphenodon_punctatus
ENSPMEG00000000720	ppargc1a	91	95.279	ENSSPAG00000023514	ppargc1a	99	96.250	Stegastes_partitus
ENSPMEG00000000720	ppargc1a	100	49.147	ENSSSCG00000029275	PPARGC1A	96	72.414	Sus_scrofa
ENSPMEG00000000720	ppargc1a	100	50.107	ENSTGUG00000009487	PPARGC1A	96	71.983	Taeniopygia_guttata
ENSPMEG00000000720	ppargc1a	92	73.099	ENSTRUG00000007210	ppargc1a	84	90.303	Takifugu_rubripes
ENSPMEG00000000720	ppargc1a	100	50.481	ENSTTRG00000005327	PPARGC1A	87	80.000	Tursiops_truncatus
ENSPMEG00000000720	ppargc1a	60	79.141	ENSUAMG00000020843	PPARGC1A	86	80.114	Ursus_americanus
ENSPMEG00000000720	ppargc1a	98	48.751	ENSUMAG00000003557	PPARGC1A	87	80.114	Ursus_maritimus
ENSPMEG00000000720	ppargc1a	92	47.851	ENSVPAG00000003478	PPARGC1A	88	79.545	Vicugna_pacos
ENSPMEG00000000720	ppargc1a	100	48.830	ENSVVUG00000013365	PPARGC1A	88	80.114	Vulpes_vulpes
ENSPMEG00000000720	ppargc1a	100	48.501	ENSXETG00000020468	ppargc1a	94	73.516	Xenopus_tropicalis
ENSPMEG00000000720	ppargc1a	100	90.880	ENSXCOG00000004835	ppargc1a	94	99.167	Xiphophorus_couchianus
ENSPMEG00000000720	ppargc1a	100	96.546	ENSXMAG00000007748	ppargc1a	100	96.546	Xiphophorus_maculatus