EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSPMEG00000000724 (Gene tree)
Gene ID: -
Gene Symbol: -
Alias: -
Full Name: -
Gene Type: protein_coding
Species: Poecilia_mexicana
Status: putative
Strand: Minus strand
Length: 23095 bases
Position: chrKQ554647.1:28985-52079
Accession: -
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSPMEP00000017488	MMR_HSR1	PF01926.23	1.8e-07	1	1
ENSPMEP00000017494	MMR_HSR1	PF01926.23	2.2e-07	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSPMET00000026362	-	1712	-	ENSPMEP00000017494	398 (aa)	-	-
ENSPMET00000026345	-	1444	-	ENSPMEP00000017488	367 (aa)	-	-

Gene Model

Click here to download ENSPMEG00000000724's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSPMEG00000000724's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSPMEG00000000724	-	73	37.037	ENSPMEG00000000604	-	76	37.037
ENSPMEG00000000724	-	59	32.258	ENSPMEG00000019925	-	63	32.530
ENSPMEG00000000724	-	77	30.677	ENSPMEG00000008621	-	50	30.677
ENSPMEG00000000724	-	59	34.071	ENSPMEG00000006836	-	89	33.721
ENSPMEG00000000724	-	68	54.217	ENSPMEG00000020297	-	80	54.217
ENSPMEG00000000724	-	58	30.556	ENSPMEG00000002005	-	73	30.556
ENSPMEG00000000724	-	72	32.234	ENSPMEG00000009705	-	82	31.900
ENSPMEG00000000724	-	65	31.120	ENSPMEG00000023201	-	72	30.258
ENSPMEG00000000724	-	50	33.152	ENSPMEG00000010870	-	74	33.152
ENSPMEG00000000724	-	81	62.416	ENSPMEG00000006334	-	89	64.765
ENSPMEG00000000724	-	62	33.190	ENSPMEG00000011775	-	68	33.190
ENSPMEG00000000724	-	50	31.053	ENSPMEG00000000862	-	57	31.053
ENSPMEG00000000724	-	65	31.535	ENSPMEG00000005464	-	75	31.418
ENSPMEG00000000724	-	75	61.818	ENSPMEG00000010605	-	89	63.636
ENSPMEG00000000724	-	68	30.000	ENSPMEG00000003611	-	80	30.000
ENSPMEG00000000724	-	90	30.702	ENSPMEG00000011042	-	88	30.263
ENSPMEG00000000724	-	65	32.231	ENSPMEG00000002166	-	63	33.206
ENSPMEG00000000724	-	57	30.047	ENSPMEG00000014325	-	94	30.047
ENSPMEG00000000724	-	99	56.000	ENSPMEG00000005912	-	98	54.000
ENSPMEG00000000724	-	71	30.741	ENSPMEG00000023187	-	93	30.370
ENSPMEG00000000724	-	68	31.349	ENSPMEG00000002180	-	88	31.071
ENSPMEG00000000724	-	52	73.822	ENSPMEG00000020252	-	74	73.822

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSPMEG00000000724	-	71	33.603	ENSAPOG00000019154	-	60	33.603	Acanthochromis_polyacanthus
ENSPMEG00000000724	-	57	32.243	ENSACIG00000009811	-	78	32.243	Amphilophus_citrinellus
ENSPMEG00000000724	-	55	36.453	ENSACIG00000007725	-	66	36.453	Amphilophus_citrinellus
ENSPMEG00000000724	-	71	30.075	ENSAOCG00000003425	-	88	30.075	Amphiprion_ocellaris
ENSPMEG00000000724	-	74	37.143	ENSAOCG00000004579	-	83	41.304	Amphiprion_ocellaris
ENSPMEG00000000724	-	67	37.019	ENSAPEG00000014403	-	69	38.942	Amphiprion_percula
ENSPMEG00000000724	-	73	36.321	ENSAPEG00000001491	-	69	36.321	Amphiprion_percula
ENSPMEG00000000724	-	69	38.222	ENSATEG00000015654	-	77	36.567	Anabas_testudineus
ENSPMEG00000000724	-	65	36.555	ENSATEG00000023053	-	92	37.395	Anabas_testudineus
ENSPMEG00000000724	-	70	38.462	ENSACLG00000014795	-	75	38.462	Astatotilapia_calliptera
ENSPMEG00000000724	-	77	33.333	ENSAMXG00000033117	-	83	33.182	Astyanax_mexicanus
ENSPMEG00000000724	-	69	33.891	ENSAMXG00000006064	-	84	33.891	Astyanax_mexicanus
ENSPMEG00000000724	-	71	33.019	ENSAMXG00000021387	-	71	34.434	Astyanax_mexicanus
ENSPMEG00000000724	-	69	36.686	ENSAMXG00000019109	-	90	36.686	Astyanax_mexicanus
ENSPMEG00000000724	-	56	33.810	ENSAMXG00000026085	-	88	33.086	Astyanax_mexicanus
ENSPMEG00000000724	-	66	38.498	ENSAMXG00000030744	-	93	35.124	Astyanax_mexicanus
ENSPMEG00000000724	-	69	34.975	ENSCSEG00000021519	-	79	36.296	Cynoglossus_semilaevis
ENSPMEG00000000724	-	72	33.083	ENSCVAG00000003054	-	75	33.083	Cyprinodon_variegatus
ENSPMEG00000000724	-	74	59.489	ENSCVAG00000005778	-	87	59.489	Cyprinodon_variegatus
ENSPMEG00000000724	-	57	63.679	ENSCVAG00000012268	-	62	63.679	Cyprinodon_variegatus
ENSPMEG00000000724	-	73	40.952	ENSDARG00000063481	si:ch211-214j24.15	62	41.981	Danio_rerio
ENSPMEG00000000724	-	62	34.483	ENSDARG00000102683	CR626941.1	76	34.483	Danio_rerio
ENSPMEG00000000724	-	59	41.667	ENSELUG00000024502	-	69	42.453	Esox_lucius
ENSPMEG00000000724	-	58	33.019	ENSELUG00000018709	-	83	32.107	Esox_lucius
ENSPMEG00000000724	-	59	41.014	ENSELUG00000018192	-	90	41.014	Esox_lucius
ENSPMEG00000000724	-	58	33.019	ENSFHEG00000020783	-	83	33.019	Fundulus_heteroclitus
ENSPMEG00000000724	-	56	35.749	ENSFHEG00000023334	-	71	35.749	Fundulus_heteroclitus
ENSPMEG00000000724	-	59	33.184	ENSGMOG00000001626	-	100	35.437	Gadus_morhua
ENSPMEG00000000724	-	67	30.952	ENSGAFG00000020826	-	92	30.952	Gambusia_affinis
ENSPMEG00000000724	-	64	38.723	ENSHBUG00000016284	-	97	38.723	Haplochromis_burtoni
ENSPMEG00000000724	-	60	34.247	ENSHBUG00000008326	-	92	34.247	Haplochromis_burtoni
ENSPMEG00000000724	-	64	30.833	ENSHBUG00000001242	-	57	30.833	Haplochromis_burtoni
ENSPMEG00000000724	-	69	32.323	ENSKMAG00000014764	-	87	32.828	Kryptolebias_marmoratus
ENSPMEG00000000724	-	59	38.889	ENSKMAG00000009600	-	67	38.889	Kryptolebias_marmoratus
ENSPMEG00000000724	-	70	35.081	ENSKMAG00000004774	-	78	35.081	Kryptolebias_marmoratus
ENSPMEG00000000724	-	67	33.725	ENSLBEG00000019652	-	79	34.510	Labrus_bergylta
ENSPMEG00000000724	-	58	36.792	ENSLOCG00000012075	-	86	38.140	Lepisosteus_oculatus
ENSPMEG00000000724	-	65	36.402	ENSLOCG00000000517	-	93	34.268	Lepisosteus_oculatus
ENSPMEG00000000724	-	56	40.976	ENSLOCG00000017852	-	91	37.906	Lepisosteus_oculatus
ENSPMEG00000000724	-	65	38.174	ENSLOCG00000018072	-	90	39.286	Lepisosteus_oculatus
ENSPMEG00000000724	-	68	33.216	ENSLOCG00000000385	-	93	33.987	Lepisosteus_oculatus
ENSPMEG00000000724	-	91	30.994	ENSLOCG00000016496	-	86	30.994	Lepisosteus_oculatus
ENSPMEG00000000724	-	59	37.963	ENSLOCG00000000082	-	92	36.496	Lepisosteus_oculatus
ENSPMEG00000000724	-	66	34.025	ENSMAMG00000021970	-	94	34.855	Mastacembelus_armatus
ENSPMEG00000000724	-	72	37.619	ENSMAMG00000015600	-	76	37.619	Mastacembelus_armatus
ENSPMEG00000000724	-	67	34.818	ENSMAMG00000021969	-	57	34.818	Mastacembelus_armatus
ENSPMEG00000000724	-	70	33.588	ENSMMOG00000012876	-	73	34.351	Mola_mola
ENSPMEG00000000724	-	57	35.238	ENSNBRG00000002136	-	64	37.619	Neolamprologus_brichardi
ENSPMEG00000000724	-	80	31.148	ENSORLG00000028011	-	61	31.148	Oryzias_latipes
ENSPMEG00000000724	-	86	37.069	ENSORLG00000002031	-	74	37.069	Oryzias_latipes
ENSPMEG00000000724	-	71	39.474	ENSORLG00000002537	-	61	41.053	Oryzias_latipes
ENSPMEG00000000724	-	71	35.000	ENSORLG00020011284	-	79	35.000	Oryzias_latipes_hni
ENSPMEG00000000724	-	74	37.900	ENSORLG00020008286	-	88	37.900	Oryzias_latipes_hni
ENSPMEG00000000724	-	83	36.652	ENSORLG00020008323	-	72	36.652	Oryzias_latipes_hni
ENSPMEG00000000724	-	72	39.474	ENSORLG00015004110	-	62	41.053	Oryzias_latipes_hsok
ENSPMEG00000000724	-	84	38.222	ENSORLG00015004522	-	71	38.222	Oryzias_latipes_hsok
ENSPMEG00000000724	-	75	35.945	ENSOMEG00000010594	-	88	37.500	Oryzias_melastigma
ENSPMEG00000000724	-	71	37.073	ENSOMEG00000020433	-	79	37.073	Oryzias_melastigma
ENSPMEG00000000724	-	59	39.070	ENSPKIG00000017688	-	67	39.070	Paramormyrops_kingsleyae
ENSPMEG00000000724	-	58	39.151	ENSPKIG00000017193	-	80	39.623	Paramormyrops_kingsleyae
ENSPMEG00000000724	-	57	33.178	ENSPMGG00000017993	-	74	33.178	Periophthalmus_magnuspinnatus
ENSPMEG00000000724	-	64	34.322	ENSPMGG00000014055	-	85	34.322	Periophthalmus_magnuspinnatus
ENSPMEG00000000724	-	66	32.231	ENSPMGG00000014056	-	84	32.231	Periophthalmus_magnuspinnatus
ENSPMEG00000000724	-	72	77.333	ENSPFOG00000022479	-	97	77.333	Poecilia_formosa
ENSPMEG00000000724	-	58	37.089	ENSPFOG00000005689	si:dkey-185m8.2	67	37.089	Poecilia_formosa
ENSPMEG00000000724	-	95	56.538	ENSPFOG00000012732	-	95	56.538	Poecilia_formosa
ENSPMEG00000000724	-	78	55.939	ENSPFOG00000015875	-	94	55.939	Poecilia_formosa
ENSPMEG00000000724	-	73	36.111	ENSPFOG00000016787	-	93	36.111	Poecilia_formosa
ENSPMEG00000000724	-	94	54.231	ENSPFOG00000013349	-	95	54.231	Poecilia_formosa
ENSPMEG00000000724	-	68	65.403	ENSPFOG00000015865	-	86	65.403	Poecilia_formosa
ENSPMEG00000000724	-	79	53.333	ENSPFOG00000013109	-	91	60.360	Poecilia_formosa
ENSPMEG00000000724	-	68	70.870	ENSPFOG00000022853	-	90	70.870	Poecilia_formosa
ENSPMEG00000000724	-	71	55.598	ENSPFOG00000015871	-	91	55.598	Poecilia_formosa
ENSPMEG00000000724	-	89	72.455	ENSPFOG00000000191	-	84	85.036	Poecilia_formosa
ENSPMEG00000000724	-	58	62.927	ENSPLAG00000020776	-	81	62.927	Poecilia_latipinna
ENSPMEG00000000724	-	63	33.190	ENSPLAG00000018606	-	79	33.190	Poecilia_latipinna
ENSPMEG00000000724	-	67	66.791	ENSPLAG00000018692	-	97	66.791	Poecilia_latipinna
ENSPMEG00000000724	-	72	60.902	ENSPLAG00000018664	-	93	58.304	Poecilia_latipinna
ENSPMEG00000000724	-	56	65.049	ENSPLAG00000003020	-	73	65.049	Poecilia_latipinna
ENSPMEG00000000724	-	57	61.792	ENSPREG00000001250	-	74	61.792	Poecilia_reticulata
ENSPMEG00000000724	-	79	36.111	ENSPREG00000020440	-	83	36.111	Poecilia_reticulata
ENSPMEG00000000724	-	94	54.815	ENSPREG00000001530	-	95	55.301	Poecilia_reticulata
ENSPMEG00000000724	-	57	40.094	ENSPNYG00000010004	-	65	40.094	Pundamilia_nyererei
ENSPMEG00000000724	-	68	38.153	ENSPNAG00000002097	-	87	38.153	Pygocentrus_nattereri
ENSPMEG00000000724	-	69	34.328	ENSPNAG00000013132	-	77	34.328	Pygocentrus_nattereri
ENSPMEG00000000724	-	62	36.522	ENSPNAG00000019899	-	83	36.522	Pygocentrus_nattereri
ENSPMEG00000000724	-	57	32.075	ENSPNAG00000025850	-	85	30.827	Pygocentrus_nattereri
ENSPMEG00000000724	-	69	33.908	ENSPNAG00000014932	-	64	34.483	Pygocentrus_nattereri
ENSPMEG00000000724	-	56	34.783	ENSSFOG00015002420	-	69	36.232	Scleropages_formosus
ENSPMEG00000000724	-	71	31.502	ENSSFOG00015002507	-	96	31.502	Scleropages_formosus
ENSPMEG00000000724	-	60	33.184	ENSSFOG00015002503	-	76	33.184	Scleropages_formosus
ENSPMEG00000000724	-	74	35.211	ENSSMAG00000012187	-	64	34.906	Scophthalmus_maximus
ENSPMEG00000000724	-	57	37.321	ENSSDUG00000022299	-	70	37.321	Seriola_dumerili
ENSPMEG00000000724	-	64	38.776	ENSSLDG00000009168	-	97	34.661	Seriola_lalandi_dorsalis
ENSPMEG00000000724	-	68	38.318	ENSSLDG00000010531	-	95	35.075	Seriola_lalandi_dorsalis
ENSPMEG00000000724	-	69	36.842	ENSSLDG00000005786	-	61	36.842	Seriola_lalandi_dorsalis
ENSPMEG00000000724	-	72	37.438	ENSSPAG00000017616	-	83	37.438	Stegastes_partitus
ENSPMEG00000000724	-	57	35.714	ENSSPAG00000015927	-	75	36.667	Stegastes_partitus
ENSPMEG00000000724	-	65	35.772	ENSTRUG00000020422	-	73	35.772	Takifugu_rubripes
ENSPMEG00000000724	-	66	34.836	ENSTRUG00000018070	-	71	34.836	Takifugu_rubripes
ENSPMEG00000000724	-	66	36.290	ENSTNIG00000004275	-	95	36.653	Tetraodon_nigroviridis
ENSPMEG00000000724	-	57	39.904	ENSTNIG00000004220	-	76	40.476	Tetraodon_nigroviridis
ENSPMEG00000000724	-	58	37.089	ENSXCOG00000009005	-	71	37.089	Xiphophorus_couchianus
ENSPMEG00000000724	-	68	52.209	ENSXCOG00000018421	-	97	52.209	Xiphophorus_couchianus
ENSPMEG00000000724	-	88	54.615	ENSXMAG00000023360	-	90	54.615	Xiphophorus_maculatus