EuRBPDB

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  • Description
  • RBDs
  • Transcripts
  • Gene Model
  • PPI
  • Paralogs
  • Orthologs
Description
Ensembl ID
ENSPMEG00000000838 (Gene tree)
Gene ID
106933942
Gene Symbol
puf60b
Alias
-
Full Name
poly(U) binding splicing factor 60
Gene Type
protein_coding
Species
Poecilia_mexicana
Status
putative
Strand
Minus strand
Length
15233 bases
Position
chrKQ552684.1:85214-100446
Accession
106933942
RBP type
canonical RBP
Summary
-
RNA binding domains(RBDs)
Protein IDDomain Pfam IDE-value Domain number Total number
ENSPMEP00000018244RRM_1PF00076.221.2e-4412
ENSPMEP00000018244RRM_1PF00076.221.2e-4422
ENSPMEP00000018248RRM_1PF00076.229e-4412
ENSPMEP00000018248RRM_1PF00076.229e-4422
ENSPMEP00000018249RRM_1PF00076.221e-4312
ENSPMEP00000018249RRM_1PF00076.221e-4322
Transcripts
Transcript IDNameLengthRefSeq ID Protein IDLengthRefSeq IDUniportKB ID
ENSPMET00000027330-2866XM_015013522ENSPMEP00000018249513 (aa)XP_014869008-
ENSPMET00000034122-2773XM_015013517ENSPMEP00000018244552 (aa)XP_014869003UPI000444451A
ENSPMET00000027307-2815-ENSPMEP00000018248496 (aa)--
Gene Model
Click here to download ENSPMEG00000000838's gene model file
Protein-Protein Interaction (PPI)

Clik here to download ENSPMEG00000000838's network
Paralogs
Ensembl IDGene SymbolCoverageIdentiy ParalogGene SymbolCoverageIdentiy
ENSPMEG00000000838puf60b5636.275ENSPMEG00000002969u2af2a6638.235
ENSPMEG00000000838puf60b6037.255ENSPMEG00000003734-7937.255
ENSPMEG00000000838puf60b10082.136ENSPMEG00000009767-9281.439
Orthologs
Ensembl IDGene SymbolCoverageIdentiy OrthologGene SymbolCoverageIdentiy Species
ENSPMEG00000000838puf60b10085.988ENSG00000179950PUF6010084.837Homo_sapiens
ENSPMEG00000000838puf60b10097.661ENSAPOG00000001713puf60b10097.338Acanthochromis_polyacanthus
ENSPMEG00000000838puf60b10084.069ENSAMEG00000006406PUF609381.973Ailuropoda_melanoleuca
ENSPMEG00000000838puf60b10077.821ENSACIG00000003263-9977.670Amphilophus_citrinellus
ENSPMEG00000000838puf60b10098.051ENSACIG00000021705puf60b10098.051Amphilophus_citrinellus
ENSPMEG00000000838puf60b10083.658ENSAOCG00000015558-10083.302Amphiprion_ocellaris
ENSPMEG00000000838puf60b10097.661ENSAOCG00000005395puf60b10097.661Amphiprion_ocellaris
ENSPMEG00000000838puf60b10095.161ENSAPEG00000011923puf60b9795.161Amphiprion_percula
ENSPMEG00000000838puf60b10077.154ENSAPEG00000001836-9978.088Amphiprion_percula
ENSPMEG00000000838puf60b10098.441ENSATEG00000001730puf60b10097.719Anabas_testudineus
ENSPMEG00000000838puf60b10082.296ENSATEG00000006303-10081.973Anabas_testudineus
ENSPMEG00000000838puf60b10086.564ENSAPLG00000010150PUF6010084.820Anas_platyrhynchos
ENSPMEG00000000838puf60b10085.496ENSACAG00000001645PUF609784.091Anolis_carolinensis
ENSPMEG00000000838puf60b10085.797ENSANAG00000018626PUF6010084.645Aotus_nancymaae
ENSPMEG00000000838puf60b10098.051ENSACLG00000004462puf60b10098.051Astatotilapia_calliptera
ENSPMEG00000000838puf60b10080.835ENSAMXG00000041030puf60b10081.404Astyanax_mexicanus
ENSPMEG00000000838puf60b10087.425ENSAMXG00000036570puf60a9787.625Astyanax_mexicanus
ENSPMEG00000000838puf60b10086.372ENSBTAG00000037493PUF6010083.738Bos_taurus
ENSPMEG00000000838puf60b8053.710WBGene00004389rnp-68850.779Caenorhabditis_elegans
ENSPMEG00000000838puf60b10085.988ENSCJAG00000021485PUF6010083.364Callithrix_jacchus
ENSPMEG00000000838puf60b10085.797ENSCAFG00000001400PUF609383.871Canis_familiaris
ENSPMEG00000000838puf60b10086.180ENSCAFG00020018754PUF6010083.551Canis_lupus_dingo
ENSPMEG00000000838puf60b10086.372ENSCHIG00000001618PUF608784.440Capra_hircus
ENSPMEG00000000838puf60b10086.180ENSTSYG00000011912PUF6010085.029Carlito_syrichta
ENSPMEG00000000838puf60b10081.333ENSCPOG00000014613PUF609479.473Cavia_porcellus
ENSPMEG00000000838puf60b10086.180ENSCCAG00000007744PUF6010083.551Cebus_capucinus
ENSPMEG00000000838puf60b10085.988ENSCATG00000035405PUF6010083.364Cercocebus_atys
ENSPMEG00000000838puf60b10086.180ENSCLAG00000009154PUF609384.250Chinchilla_lanigera
ENSPMEG00000000838puf60b10085.988ENSCSAG00000008878PUF6010084.837Chlorocebus_sabaeus
ENSPMEG00000000838puf60b10085.605ENSCPBG00000005595PUF609983.804Chrysemys_picta_bellii
ENSPMEG00000000838puf60b6261.994ENSCING00000002156-8762.500Ciona_intestinalis
ENSPMEG00000000838puf60b9848.544ENSCING00000008436-9946.904Ciona_intestinalis
ENSPMEG00000000838puf60b9754.286ENSCSAVG00000001385-9954.143Ciona_savignyi
ENSPMEG00000000838puf60b9749.482ENSCSAVG00000004765-9748.571Ciona_savignyi
ENSPMEG00000000838puf60b8185.545ENSCANG00000041843PUF6010084.123Colobus_angolensis_palliatus
ENSPMEG00000000838puf60b10086.372ENSCGRG00001017442Puf609384.440Cricetulus_griseus_chok1gshd
ENSPMEG00000000838puf60b10086.372ENSCGRG00000003717Puf609384.440Cricetulus_griseus_crigri
ENSPMEG00000000838puf60b10079.482ENSCSEG00000014845-8980.279Cynoglossus_semilaevis
ENSPMEG00000000838puf60b10098.051ENSCSEG00000019887puf60b9496.970Cynoglossus_semilaevis
ENSPMEG00000000838puf60b10099.025ENSCVAG00000009386puf60b10099.025Cyprinodon_variegatus
ENSPMEG00000000838puf60b9082.960ENSCVAG00000001560-9881.197Cyprinodon_variegatus
ENSPMEG00000000838puf60b10087.283ENSDARG00000032175puf60a9991.925Danio_rerio
ENSPMEG00000000838puf60b10081.784ENSDARG00000001241puf60b9998.413Danio_rerio
ENSPMEG00000000838puf60b9971.595ENSDNOG00000043278PUF609071.206Dasypus_novemcinctus
ENSPMEG00000000838puf60b10086.372ENSDORG00000004585Puf609584.440Dipodomys_ordii
ENSPMEG00000000838puf60b8466.667FBgn0028577hfp7267.843Drosophila_melanogaster
ENSPMEG00000000838puf60b9772.577ENSEBUG00000005470-9466.667Eptatretus_burgeri
ENSPMEG00000000838puf60b10061.565ENSEBUG00000014291puf60b8462.413Eptatretus_burgeri
ENSPMEG00000000838puf60b10086.180ENSEASG00005009695PUF6010083.551Equus_asinus_asinus
ENSPMEG00000000838puf60b10086.180ENSECAG00000024681PUF609884.121Equus_caballus
ENSPMEG00000000838puf60b10088.600ENSELUG00000018443-10087.925Esox_lucius
ENSPMEG00000000838puf60b10087.977ENSELUG00000006507puf60b10085.278Esox_lucius
ENSPMEG00000000838puf60b10086.180ENSFCAG00000001045PUF6010085.029Felis_catus
ENSPMEG00000000838puf60b10077.351ENSFALG00000001136PUF609876.281Ficedula_albicollis
ENSPMEG00000000838puf60b10085.988ENSFDAG00000017177PUF609384.250Fukomys_damarensis
ENSPMEG00000000838puf60b9682.485ENSFHEG00000021687PUF6010083.402Fundulus_heteroclitus
ENSPMEG00000000838puf60b10099.805ENSFHEG00000020046puf60b10099.810Fundulus_heteroclitus
ENSPMEG00000000838puf60b10083.012ENSGMOG00000006392puf60b10082.061Gadus_morhua
ENSPMEG00000000838puf60b6689.504ENSGALG00000039901PUF609390.533Gallus_gallus
ENSPMEG00000000838puf60b10099.805ENSGAFG00000021040puf60b10099.805Gambusia_affinis
ENSPMEG00000000838puf60b10080.723ENSGAFG00000004334-9980.903Gambusia_affinis
ENSPMEG00000000838puf60b10084.211ENSGACG00000004717puf60b9884.393Gasterosteus_aculeatus
ENSPMEG00000000838puf60b10073.152ENSGACG00000001484-10072.179Gasterosteus_aculeatus
ENSPMEG00000000838puf60b10085.605ENSGAGG00000013289PUF609383.396Gopherus_agassizii
ENSPMEG00000000838puf60b10085.988ENSGGOG00000004646PUF6010083.364Gorilla_gorilla
ENSPMEG00000000838puf60b10098.051ENSHBUG00000015118puf60b10098.051Haplochromis_burtoni
ENSPMEG00000000838puf60b10083.702ENSHBUG00000009634-10083.300Haplochromis_burtoni
ENSPMEG00000000838puf60b10085.988ENSHGLG00000006111PUF609384.250Heterocephalus_glaber_female
ENSPMEG00000000838puf60b10085.988ENSHGLG00100012362PUF609384.250Heterocephalus_glaber_male
ENSPMEG00000000838puf60b10092.481ENSHCOG00000015541puf60b10093.071Hippocampus_comes
ENSPMEG00000000838puf60b9867.451ENSHCOG00000000378-9966.163Hippocampus_comes
ENSPMEG00000000838puf60b10085.542ENSIPUG00000002453puf60a9985.141Ictalurus_punctatus
ENSPMEG00000000838puf60b10082.197ENSIPUG00000004660puf60b9981.818Ictalurus_punctatus
ENSPMEG00000000838puf60b10086.180ENSSTOG00000025037PUF609484.250Ictidomys_tridecemlineatus
ENSPMEG00000000838puf60b10086.372ENSJJAG00000001076Puf609384.440Jaculus_jaculus
ENSPMEG00000000838puf60b10099.415ENSKMAG00000016745puf60b10099.415Kryptolebias_marmoratus
ENSPMEG00000000838puf60b10077.927ENSKMAG00000010106-10078.352Kryptolebias_marmoratus
ENSPMEG00000000838puf60b10093.957ENSLBEG00000012505puf60b10094.027Labrus_bergylta
ENSPMEG00000000838puf60b7380.054ENSLACG00000005456PUF6010078.016Latimeria_chalumnae
ENSPMEG00000000838puf60b10089.126ENSLOCG00000010106puf60b10088.636Lepisosteus_oculatus
ENSPMEG00000000838puf60b10085.029ENSLAFG00000022929PUF609483.302Loxodonta_africana
ENSPMEG00000000838puf60b10085.988ENSMFAG00000043373PUF6010083.364Macaca_fascicularis
ENSPMEG00000000838puf60b10085.988ENSMMUG00000013558PUF6010083.364Macaca_mulatta
ENSPMEG00000000838puf60b10085.988ENSMNEG00000031099PUF6010083.364Macaca_nemestrina
ENSPMEG00000000838puf60b10085.988ENSMLEG00000040009PUF6010084.837Mandrillus_leucophaeus
ENSPMEG00000000838puf60b10096.296ENSMAMG00000010394puf60b10093.738Mastacembelus_armatus
ENSPMEG00000000838puf60b10083.495ENSMAMG00000019476-10082.955Mastacembelus_armatus
ENSPMEG00000000838puf60b10083.463ENSMZEG00005019425-10082.353Maylandia_zebra
ENSPMEG00000000838puf60b10098.051ENSMZEG00005018515puf60b10098.051Maylandia_zebra
ENSPMEG00000000838puf60b10086.564ENSMGAG00000013070PUF609390.855Meleagris_gallopavo
ENSPMEG00000000838puf60b6990.278ENSMAUG00000014267-9087.432Mesocricetus_auratus
ENSPMEG00000000838puf60b9671.047ENSMAUG00000018549-9570.287Mesocricetus_auratus
ENSPMEG00000000838puf60b10086.180ENSMICG00000012226PUF6010083.551Microcebus_murinus
ENSPMEG00000000838puf60b10086.372ENSMOCG00000018780Puf609384.440Microtus_ochrogaster
ENSPMEG00000000838puf60b10098.246ENSMMOG00000004217puf60b10098.246Mola_mola
ENSPMEG00000000838puf60b10076.305ENSMMOG00000018059-9976.376Mola_mola
ENSPMEG00000000838puf60b10085.797ENSMODG00000009161PUF609483.871Monodelphis_domestica
ENSPMEG00000000838puf60b10090.058ENSMALG00000006797puf60b10089.544Monopterus_albus
ENSPMEG00000000838puf60b10082.296ENSMALG00000000200-10081.214Monopterus_albus
ENSPMEG00000000838puf60b10086.564MGP_CAROLIEiJ_G0019910Puf609384.820Mus_caroli
ENSPMEG00000000838puf60b10086.564ENSMUSG00000002524Puf609384.820Mus_musculus
ENSPMEG00000000838puf60b10086.564MGP_PahariEiJ_G0019920Puf609384.820Mus_pahari
ENSPMEG00000000838puf60b10086.564MGP_SPRETEiJ_G0020812Puf609384.820Mus_spretus
ENSPMEG00000000838puf60b10085.988ENSMPUG00000008137PUF609284.061Mustela_putorius_furo
ENSPMEG00000000838puf60b10082.143ENSMLUG00000013032-9780.952Myotis_lucifugus
ENSPMEG00000000838puf60b10085.605ENSMLUG00000000238-9383.681Myotis_lucifugus
ENSPMEG00000000838puf60b10086.372ENSNGAG00000000712Puf6010085.221Nannospalax_galili
ENSPMEG00000000838puf60b8395.413ENSNBRG00000013047puf60b9797.362Neolamprologus_brichardi
ENSPMEG00000000838puf60b10083.463ENSNBRG00000017223-10082.353Neolamprologus_brichardi
ENSPMEG00000000838puf60b10085.988ENSNLEG00000002156PUF609884.061Nomascus_leucogenys
ENSPMEG00000000838puf60b7293.863ENSOPRG00000002147PUF607293.863Ochotona_princeps
ENSPMEG00000000838puf60b7190.294ENSODEG00000014024-8990.294Octodon_degus
ENSPMEG00000000838puf60b9863.690ENSODEG00000015513-9762.089Octodon_degus
ENSPMEG00000000838puf60b10098.051ENSONIG00000006247puf60b9898.073Oreochromis_niloticus
ENSPMEG00000000838puf60b10083.268ENSONIG00000014030-10081.818Oreochromis_niloticus
ENSPMEG00000000838puf60b9772.200ENSOANG00000006962PUF609870.099Ornithorhynchus_anatinus
ENSPMEG00000000838puf60b9982.081ENSORLG00000028655-9981.888Oryzias_latipes
ENSPMEG00000000838puf60b10098.441ENSORLG00000012279puf60b10098.441Oryzias_latipes
ENSPMEG00000000838puf60b10098.441ENSORLG00020007333puf6010098.441Oryzias_latipes_hni
ENSPMEG00000000838puf60b9982.718ENSORLG00020018144-9981.818Oryzias_latipes_hni
ENSPMEG00000000838puf60b9982.718ENSORLG00015016833-9981.629Oryzias_latipes_hsok
ENSPMEG00000000838puf60b10098.058ENSORLG00015007718puf60b10098.058Oryzias_latipes_hsok
ENSPMEG00000000838puf60b10095.992ENSOMEG00000001643puf60b10095.717Oryzias_melastigma
ENSPMEG00000000838puf60b9982.897ENSOMEG00000022185-9981.784Oryzias_melastigma
ENSPMEG00000000838puf60b10086.180ENSOGAG00000006259PUF609384.250Otolemur_garnettii
ENSPMEG00000000838puf60b10084.556ENSOARG00000016235PUF609882.634Ovis_aries
ENSPMEG00000000838puf60b10085.988ENSPPAG00000029933PUF6010083.364Pan_paniscus
ENSPMEG00000000838puf60b10086.180ENSPPRG00000003257PUF6010085.029Panthera_pardus
ENSPMEG00000000838puf60b10085.516ENSPTIG00000009795PUF609981.973Panthera_tigris_altaica
ENSPMEG00000000838puf60b10085.988ENSPTRG00000020670PUF6010083.364Pan_troglodytes
ENSPMEG00000000838puf60b10085.988ENSPTRG00000043963-9884.061Pan_troglodytes
ENSPMEG00000000838puf60b10085.988ENSPANG00000021936PUF6010083.364Papio_anubis
ENSPMEG00000000838puf60b10089.400ENSPKIG00000004295puf60a9991.940Paramormyrops_kingsleyae
ENSPMEG00000000838puf60b10090.253ENSPKIG00000012204puf60b10091.033Paramormyrops_kingsleyae
ENSPMEG00000000838puf60b10085.988ENSPSIG00000004679PUF609984.250Pelodiscus_sinensis
ENSPMEG00000000838puf60b10095.930ENSPMGG00000013444puf60b10095.560Periophthalmus_magnuspinnatus
ENSPMEG00000000838puf60b10086.372ENSPEMG00000008820Puf609384.440Peromyscus_maniculatus_bairdii
ENSPMEG00000000838puf60b10086.180ENSPCIG00000020270PUF609885.029Phascolarctos_cinereus
ENSPMEG00000000838puf60b100100.000ENSPFOG00000019217puf60b100100.000Poecilia_formosa
ENSPMEG00000000838puf60b10081.942ENSPFOG00000011118-10081.250Poecilia_formosa
ENSPMEG00000000838puf60b10082.330ENSPLAG00000017025-9281.250Poecilia_latipinna
ENSPMEG00000000838puf60b100100.000ENSPLAG00000010754puf60b100100.000Poecilia_latipinna
ENSPMEG00000000838puf60b10097.984ENSPREG00000005440puf60b10097.984Poecilia_reticulata
ENSPMEG00000000838puf60b8183.886ENSPPYG00000018951-9582.464Pongo_abelii
ENSPMEG00000000838puf60b8185.545ENSPCAG00000014837PUF6010084.123Procavia_capensis
ENSPMEG00000000838puf60b10085.988ENSPCOG00000027981PUF6010083.364Propithecus_coquereli
ENSPMEG00000000838puf60b10096.203ENSPVAG00000016167PUF608196.203Pteropus_vampyrus
ENSPMEG00000000838puf60b10083.463ENSPNYG00000004273-10082.353Pundamilia_nyererei
ENSPMEG00000000838puf60b10098.051ENSPNYG00000002556puf60b10098.051Pundamilia_nyererei
ENSPMEG00000000838puf60b10082.863ENSPNAG00000019415puf60b8982.460Pygocentrus_nattereri
ENSPMEG00000000838puf60b10087.425ENSPNAG00000019909puf60a9987.625Pygocentrus_nattereri
ENSPMEG00000000838puf60b10086.564ENSRNOG00000009960Puf609384.820Rattus_norvegicus
ENSPMEG00000000838puf60b10085.988ENSRBIG00000035274PUF6010083.364Rhinopithecus_bieti
ENSPMEG00000000838puf60b10085.988ENSRROG00000029360PUF6010083.364Rhinopithecus_roxellana
ENSPMEG00000000838puf60b10084.645ENSSBOG00000027089PUF609982.176Saimiri_boliviensis_boliviensis
ENSPMEG00000000838puf60b9085.714ENSSHAG00000006668PUF609083.579Sarcophilus_harrisii
ENSPMEG00000000838puf60b9589.817ENSSFOG00015019371puf60a9889.817Scleropages_formosus
ENSPMEG00000000838puf60b10083.044ENSSFOG00015019619puf60b9985.772Scleropages_formosus
ENSPMEG00000000838puf60b7698.976ENSSMAG00000016381puf60b7898.366Scophthalmus_maximus
ENSPMEG00000000838puf60b10096.374ENSSDUG00000009935puf60b9996.415Seriola_dumerili
ENSPMEG00000000838puf60b9783.735ENSSDUG00000007048-9783.789Seriola_dumerili
ENSPMEG00000000838puf60b10081.538ENSSLDG00000007366-9981.766Seriola_lalandi_dorsalis
ENSPMEG00000000838puf60b10098.441ENSSLDG00000024011puf60b10095.825Seriola_lalandi_dorsalis
ENSPMEG00000000838puf60b6578.171ENSSPUG00000013518PUF609278.788Sphenodon_punctatus
ENSPMEG00000000838puf60b10095.446ENSSPAG00000012144puf60b10095.446Stegastes_partitus
ENSPMEG00000000838puf60b10083.333ENSSPAG00000020285-10083.721Stegastes_partitus
ENSPMEG00000000838puf60b10086.180ENSSSCG00000038800PUF609784.524Sus_scrofa
ENSPMEG00000000838puf60b10083.716ENSTGUG00000012797-10082.510Taeniopygia_guttata
ENSPMEG00000000838puf60b10097.466ENSTRUG00000005420puf60b10094.877Takifugu_rubripes
ENSPMEG00000000838puf60b10081.690ENSTRUG00000008843-10081.087Takifugu_rubripes
ENSPMEG00000000838puf60b10097.271ENSTNIG00000013675puf60b9997.303Tetraodon_nigroviridis
ENSPMEG00000000838puf60b10079.727ENSTNIG00000003069-9979.922Tetraodon_nigroviridis
ENSPMEG00000000838puf60b7766.382ENSTBEG00000001899-10067.236Tupaia_belangeri
ENSPMEG00000000838puf60b5786.254ENSTBEG00000002751-9785.911Tupaia_belangeri
ENSPMEG00000000838puf60b10084.837ENSTTRG00000017088PUF6010084.069Tursiops_truncatus
ENSPMEG00000000838puf60b10086.180ENSUAMG00000024917PUF6010083.551Ursus_americanus
ENSPMEG00000000838puf60b10081.190ENSUMAG00000000272PUF609379.127Ursus_maritimus
ENSPMEG00000000838puf60b10086.180ENSVVUG00000022527PUF6010085.029Vulpes_vulpes
ENSPMEG00000000838puf60b10083.877ENSXETG00000012469puf609882.540Xenopus_tropicalis
ENSPMEG00000000838puf60b100100.000ENSXCOG00000012355puf60b100100.000Xiphophorus_couchianus
ENSPMEG00000000838puf60b10081.727ENSXMAG00000010507-9881.526Xiphophorus_maculatus
ENSPMEG00000000838puf60b100100.000ENSXMAG00000001862puf60b100100.000Xiphophorus_maculatus

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