EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSPMEG00000000921 (Gene tree)
Gene ID: 106906175
Gene Symbol: a1cf
Alias: -
Full Name: APOBEC1 complementation factor-like
Gene Type: protein_coding
Species: Poecilia_mexicana
Status: putative
Strand: Plus strand
Length: 7617 bases
Position: chrKQ553267.1:88960-96576
Accession: 106906175
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSPMEP00000020998	DND1_DSRM	PF14709.7	2.5e-25	1	1
ENSPMEP00000020998	RRM_1	PF00076.22	4.4e-30	1	2
ENSPMEP00000020998	RRM_1	PF00076.22	4.4e-30	2	2

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSPMET00000016349	-	1668	XM_014971327	ENSPMEP00000020998	555 (aa)	XP_014826813	-

Gene Model

Click here to download ENSPMEG00000000921's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSPMEG00000000921's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSPMEG00000000921	a1cf	100	98.579	ENSPMEG00000015529	-	100	98.579
ENSPMEG00000000921	a1cf	84	47.490	ENSPMEG00000015724	rbm46	76	68.443

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSPMEG00000000921	a1cf	100	69.536	ENSG00000148584	A1CF	100	87.129	Homo_sapiens
ENSPMEG00000000921	a1cf	100	76.073	ENSAPOG00000008259	a1cf	100	75.908	Acanthochromis_polyacanthus
ENSPMEG00000000921	a1cf	100	67.647	ENSAMEG00000000523	A1CF	100	66.993	Ailuropoda_melanoleuca
ENSPMEG00000000921	a1cf	100	82.285	ENSACIG00000008632	a1cf	100	82.450	Amphilophus_citrinellus
ENSPMEG00000000921	a1cf	100	78.053	ENSAOCG00000023744	a1cf	100	77.888	Amphiprion_ocellaris
ENSPMEG00000000921	a1cf	100	76.873	ENSAPEG00000009537	a1cf	100	76.710	Amphiprion_percula
ENSPMEG00000000921	a1cf	100	82.838	ENSATEG00000013720	a1cf	100	82.838	Anabas_testudineus
ENSPMEG00000000921	a1cf	100	69.118	ENSAPLG00000002964	A1CF	100	67.647	Anas_platyrhynchos
ENSPMEG00000000921	a1cf	100	70.033	ENSACAG00000015269	A1CF	100	69.536	Anolis_carolinensis
ENSPMEG00000000921	a1cf	100	70.364	ENSANAG00000019974	A1CF	100	68.543	Aotus_nancymaae
ENSPMEG00000000921	a1cf	100	78.311	ENSACLG00000017428	a1cf	100	77.649	Astatotilapia_calliptera
ENSPMEG00000000921	a1cf	100	68.182	ENSAMXG00000018180	a1cf	100	67.045	Astyanax_mexicanus
ENSPMEG00000000921	a1cf	100	70.199	ENSBTAG00000021195	A1CF	100	69.040	Bos_taurus
ENSPMEG00000000921	a1cf	100	69.281	ENSCJAG00000005045	A1CF	100	67.484	Callithrix_jacchus
ENSPMEG00000000921	a1cf	100	68.464	ENSCAFG00000015581	A1CF	100	66.993	Canis_familiaris
ENSPMEG00000000921	a1cf	100	68.464	ENSCAFG00020026421	A1CF	100	66.993	Canis_lupus_dingo
ENSPMEG00000000921	a1cf	100	69.771	ENSCHIG00000020411	A1CF	100	68.627	Capra_hircus
ENSPMEG00000000921	a1cf	94	68.947	ENSTSYG00000001755	A1CF	100	67.544	Carlito_syrichta
ENSPMEG00000000921	a1cf	100	52.585	ENSCAPG00000017386	A1CF	100	52.603	Cavia_aperea
ENSPMEG00000000921	a1cf	100	68.301	ENSCPOG00000009807	A1CF	100	66.667	Cavia_porcellus
ENSPMEG00000000921	a1cf	100	69.281	ENSCCAG00000018168	A1CF	100	67.320	Cebus_capucinus
ENSPMEG00000000921	a1cf	100	69.536	ENSCATG00000043715	A1CF	100	68.046	Cercocebus_atys
ENSPMEG00000000921	a1cf	100	68.301	ENSCLAG00000010424	A1CF	100	66.340	Chinchilla_lanigera
ENSPMEG00000000921	a1cf	100	68.627	ENSCSAG00000007032	A1CF	100	67.157	Chlorocebus_sabaeus
ENSPMEG00000000921	a1cf	97	66.667	ENSCHOG00000009089	A1CF	94	67.073	Choloepus_hoffmanni
ENSPMEG00000000921	a1cf	100	69.935	ENSCPBG00000026464	A1CF	100	68.137	Chrysemys_picta_bellii
ENSPMEG00000000921	a1cf	100	68.791	ENSCANG00000038032	A1CF	100	67.320	Colobus_angolensis_palliatus
ENSPMEG00000000921	a1cf	100	68.137	ENSCGRG00001017413	A1cf	100	66.830	Cricetulus_griseus_chok1gshd
ENSPMEG00000000921	a1cf	100	67.484	ENSCGRG00000017332	A1cf	100	66.176	Cricetulus_griseus_crigri
ENSPMEG00000000921	a1cf	100	77.687	ENSCSEG00000002361	a1cf	100	77.687	Cynoglossus_semilaevis
ENSPMEG00000000921	a1cf	100	85.974	ENSCVAG00000010520	a1cf	100	85.974	Cyprinodon_variegatus
ENSPMEG00000000921	a1cf	100	74.669	ENSDARG00000002968	a1cf	100	73.344	Danio_rerio
ENSPMEG00000000921	a1cf	100	68.627	ENSDNOG00000002829	A1CF	100	67.320	Dasypus_novemcinctus
ENSPMEG00000000921	a1cf	81	83.607	ENSETEG00000012527	A1CF	76	83.607	Echinops_telfairi
ENSPMEG00000000921	a1cf	100	68.842	ENSEASG00005012924	A1CF	100	67.374	Equus_asinus_asinus
ENSPMEG00000000921	a1cf	100	68.679	ENSECAG00000010424	A1CF	100	67.210	Equus_caballus
ENSPMEG00000000921	a1cf	77	63.924	ENSEEUG00000000013	A1CF	97	62.939	Erinaceus_europaeus
ENSPMEG00000000921	a1cf	100	73.366	ENSELUG00000003159	a1cf	100	72.386	Esox_lucius
ENSPMEG00000000921	a1cf	100	69.040	ENSFCAG00000011179	A1CF	100	67.881	Felis_catus
ENSPMEG00000000921	a1cf	100	70.861	ENSFALG00000013183	A1CF	100	69.205	Ficedula_albicollis
ENSPMEG00000000921	a1cf	100	69.702	ENSFDAG00000019371	A1CF	100	68.212	Fukomys_damarensis
ENSPMEG00000000921	a1cf	100	78.852	ENSFHEG00000019652	a1cf	96	96.094	Fundulus_heteroclitus
ENSPMEG00000000921	a1cf	100	71.264	ENSGMOG00000018943	a1cf	100	69.622	Gadus_morhua
ENSPMEG00000000921	a1cf	94	68.394	ENSGALG00000003765	A1CF	96	66.667	Gallus_gallus
ENSPMEG00000000921	a1cf	100	82.095	ENSGAFG00000014868	a1cf	100	82.095	Gambusia_affinis
ENSPMEG00000000921	a1cf	100	77.977	ENSGACG00000010241	a1cf	100	76.998	Gasterosteus_aculeatus
ENSPMEG00000000921	a1cf	95	68.484	ENSGAGG00000016508	A1CF	98	66.610	Gopherus_agassizii
ENSPMEG00000000921	a1cf	100	68.627	ENSGGOG00000009670	A1CF	100	67.157	Gorilla_gorilla
ENSPMEG00000000921	a1cf	100	80.795	ENSHBUG00000021959	a1cf	100	80.960	Haplochromis_burtoni
ENSPMEG00000000921	a1cf	100	68.954	ENSHGLG00000008955	A1CF	100	66.993	Heterocephalus_glaber_female
ENSPMEG00000000921	a1cf	100	68.954	ENSHGLG00100000518	A1CF	100	66.993	Heterocephalus_glaber_male
ENSPMEG00000000921	a1cf	100	66.881	ENSHCOG00000017669	a1cf	100	68.810	Hippocampus_comes
ENSPMEG00000000921	a1cf	87	74.539	ENSIPUG00000010367	a1cf	95	73.432	Ictalurus_punctatus
ENSPMEG00000000921	a1cf	100	80.875	ENSKMAG00000006568	a1cf	100	78.768	Kryptolebias_marmoratus
ENSPMEG00000000921	a1cf	99	79.642	ENSLBEG00000020994	a1cf	99	79.479	Labrus_bergylta
ENSPMEG00000000921	a1cf	100	71.689	ENSLACG00000008061	A1CF	100	69.868	Latimeria_chalumnae
ENSPMEG00000000921	a1cf	100	74.346	ENSLOCG00000006302	a1cf	100	72.549	Lepisosteus_oculatus
ENSPMEG00000000921	a1cf	100	68.954	ENSLAFG00000015462	A1CF	100	68.137	Loxodonta_africana
ENSPMEG00000000921	a1cf	100	69.702	ENSMFAG00000035948	A1CF	100	68.212	Macaca_fascicularis
ENSPMEG00000000921	a1cf	100	69.702	ENSMMUG00000007077	A1CF	100	68.212	Macaca_mulatta
ENSPMEG00000000921	a1cf	100	69.702	ENSMNEG00000031454	A1CF	100	68.212	Macaca_nemestrina
ENSPMEG00000000921	a1cf	100	68.627	ENSMLEG00000037223	A1CF	100	67.157	Mandrillus_leucophaeus
ENSPMEG00000000921	a1cf	100	79.901	ENSMAMG00000010402	a1cf	100	78.748	Mastacembelus_armatus
ENSPMEG00000000921	a1cf	100	78.069	ENSMZEG00005013245	a1cf	100	76.346	Maylandia_zebra
ENSPMEG00000000921	a1cf	100	68.679	ENSMGAG00000001507	A1CF	100	67.047	Meleagris_gallopavo
ENSPMEG00000000921	a1cf	100	67.810	ENSMAUG00000007422	A1cf	100	66.667	Mesocricetus_auratus
ENSPMEG00000000921	a1cf	100	68.977	ENSMICG00000003377	A1CF	100	68.317	Microcebus_murinus
ENSPMEG00000000921	a1cf	100	67.810	ENSMOCG00000021536	A1cf	100	66.340	Microtus_ochrogaster
ENSPMEG00000000921	a1cf	100	68.482	ENSMMOG00000009422	a1cf	100	67.492	Mola_mola
ENSPMEG00000000921	a1cf	88	71.028	ENSMODG00000016478	A1CF	97	69.159	Monodelphis_domestica
ENSPMEG00000000921	a1cf	100	74.662	ENSMALG00000012992	a1cf	100	73.480	Monopterus_albus
ENSPMEG00000000921	a1cf	100	68.874	MGP_CAROLIEiJ_G0022873	A1cf	100	67.384	Mus_caroli
ENSPMEG00000000921	a1cf	100	68.874	ENSMUSG00000052595	A1cf	99	71.169	Mus_musculus
ENSPMEG00000000921	a1cf	100	68.212	MGP_PahariEiJ_G0014366	A1cf	100	66.722	Mus_pahari
ENSPMEG00000000921	a1cf	100	68.709	MGP_SPRETEiJ_G0023792	A1cf	100	67.219	Mus_spretus
ENSPMEG00000000921	a1cf	100	63.562	ENSMPUG00000016971	A1CF	100	62.092	Mustela_putorius_furo
ENSPMEG00000000921	a1cf	100	68.464	ENSMLUG00000016071	A1CF	100	67.484	Myotis_lucifugus
ENSPMEG00000000921	a1cf	100	68.791	ENSNGAG00000015136	A1cf	100	67.157	Nannospalax_galili
ENSPMEG00000000921	a1cf	100	81.457	ENSNBRG00000001712	a1cf	100	81.623	Neolamprologus_brichardi
ENSPMEG00000000921	a1cf	100	69.281	ENSNLEG00000012028	A1CF	100	67.810	Nomascus_leucogenys
ENSPMEG00000000921	a1cf	94	69.474	ENSMEUG00000015909	A1CF	100	67.018	Notamacropus_eugenii
ENSPMEG00000000921	a1cf	87	85.149	ENSOPRG00000010667	A1CF	89	85.149	Ochotona_princeps
ENSPMEG00000000921	a1cf	100	81.457	ENSONIG00000019105	a1cf	100	80.795	Oreochromis_niloticus
ENSPMEG00000000921	a1cf	74	71.715	ENSOANG00000007360	A1CF	94	71.269	Ornithorhynchus_anatinus
ENSPMEG00000000921	a1cf	100	68.874	ENSOCUG00000011587	A1CF	100	67.384	Oryctolagus_cuniculus
ENSPMEG00000000921	a1cf	100	75.896	ENSORLG00000013342	a1cf	100	76.098	Oryzias_latipes
ENSPMEG00000000921	a1cf	100	78.374	ENSORLG00020000586	a1cf	100	78.699	Oryzias_latipes_hni
ENSPMEG00000000921	a1cf	100	78.374	ENSORLG00015018569	a1cf	100	78.699	Oryzias_latipes_hsok
ENSPMEG00000000921	a1cf	100	79.538	ENSOMEG00000013531	a1cf	100	79.208	Oryzias_melastigma
ENSPMEG00000000921	a1cf	100	67.647	ENSOGAG00000012884	A1CF	100	66.993	Otolemur_garnettii
ENSPMEG00000000921	a1cf	100	69.444	ENSOARG00000013695	A1CF	100	68.301	Ovis_aries
ENSPMEG00000000921	a1cf	97	66.779	ENSPPAG00000028115	A1CF	99	68.701	Pan_paniscus
ENSPMEG00000000921	a1cf	100	68.137	ENSPPRG00000012180	A1CF	100	66.993	Panthera_pardus
ENSPMEG00000000921	a1cf	100	68.137	ENSPTIG00000021223	A1CF	100	66.993	Panthera_tigris_altaica
ENSPMEG00000000921	a1cf	100	69.536	ENSPTRG00000002508	A1CF	100	68.046	Pan_troglodytes
ENSPMEG00000000921	a1cf	100	69.702	ENSPANG00000021988	A1CF	100	68.212	Papio_anubis
ENSPMEG00000000921	a1cf	100	72.222	ENSPKIG00000025176	a1cf	100	71.242	Paramormyrops_kingsleyae
ENSPMEG00000000921	a1cf	100	70.695	ENSPSIG00000010318	A1CF	100	69.040	Pelodiscus_sinensis
ENSPMEG00000000921	a1cf	98	64.407	ENSPMGG00000013359	a1cf	99	64.202	Periophthalmus_magnuspinnatus
ENSPMEG00000000921	a1cf	100	68.301	ENSPEMG00000015021	A1cf	100	66.830	Peromyscus_maniculatus_bairdii
ENSPMEG00000000921	a1cf	100	69.868	ENSPCIG00000002175	A1CF	100	68.212	Phascolarctos_cinereus
ENSPMEG00000000921	a1cf	100	87.785	ENSPFOG00000007437	-	100	87.785	Poecilia_formosa
ENSPMEG00000000921	a1cf	100	88.111	ENSPFOG00000006683	a1cf	100	88.111	Poecilia_formosa
ENSPMEG00000000921	a1cf	100	88.779	ENSPLAG00000000026	a1cf	100	88.779	Poecilia_latipinna
ENSPMEG00000000921	a1cf	100	88.779	ENSPLAG00000001210	-	100	88.779	Poecilia_latipinna
ENSPMEG00000000921	a1cf	100	87.134	ENSPREG00000016298	a1cf	100	87.134	Poecilia_reticulata
ENSPMEG00000000921	a1cf	100	70.199	ENSPPYG00000002819	A1CF	100	68.709	Pongo_abelii
ENSPMEG00000000921	a1cf	78	93.333	ENSPCAG00000006463	A1CF	70	93.333	Procavia_capensis
ENSPMEG00000000921	a1cf	100	67.974	ENSPCOG00000024172	A1CF	100	67.157	Propithecus_coquereli
ENSPMEG00000000921	a1cf	100	80.065	ENSPNYG00000017944	a1cf	100	80.229	Pundamilia_nyererei
ENSPMEG00000000921	a1cf	100	75.413	ENSPNAG00000007704	a1cf	100	74.587	Pygocentrus_nattereri
ENSPMEG00000000921	a1cf	100	69.371	ENSRNOG00000033195	A1cf	100	67.881	Rattus_norvegicus
ENSPMEG00000000921	a1cf	100	63.993	ENSRBIG00000042892	A1CF	100	65.703	Rhinopithecus_bieti
ENSPMEG00000000921	a1cf	100	68.791	ENSRROG00000041398	A1CF	100	67.320	Rhinopithecus_roxellana
ENSPMEG00000000921	a1cf	100	69.444	ENSSBOG00000021930	A1CF	100	67.974	Saimiri_boliviensis_boliviensis
ENSPMEG00000000921	a1cf	100	69.702	ENSSHAG00000005096	A1CF	100	67.384	Sarcophilus_harrisii
ENSPMEG00000000921	a1cf	100	74.587	ENSSFOG00015011774	a1cf	100	73.927	Scleropages_formosus
ENSPMEG00000000921	a1cf	100	80.687	ENSSMAG00000013271	a1cf	100	80.687	Scophthalmus_maximus
ENSPMEG00000000921	a1cf	100	79.642	ENSSDUG00000013930	a1cf	100	79.316	Seriola_dumerili
ENSPMEG00000000921	a1cf	100	76.768	ENSSLDG00000004290	a1cf	100	76.858	Seriola_lalandi_dorsalis
ENSPMEG00000000921	a1cf	94	87.719	ENSSARG00000005940	A1CF	85	87.719	Sorex_araneus
ENSPMEG00000000921	a1cf	95	67.925	ENSSPUG00000006797	A1CF	95	66.041	Sphenodon_punctatus
ENSPMEG00000000921	a1cf	100	69.444	ENSSSCG00000010431	A1CF	100	68.137	Sus_scrofa
ENSPMEG00000000921	a1cf	100	70.310	ENSTGUG00000005090	A1CF	100	68.842	Taeniopygia_guttata
ENSPMEG00000000921	a1cf	100	78.374	ENSTRUG00000001982	a1cf	100	78.374	Takifugu_rubripes
ENSPMEG00000000921	a1cf	100	77.597	ENSTNIG00000003580	a1cf	100	77.922	Tetraodon_nigroviridis
ENSPMEG00000000921	a1cf	94	65.271	ENSTTRG00000013190	A1CF	94	64.049	Tursiops_truncatus
ENSPMEG00000000921	a1cf	100	69.371	ENSUAMG00000020065	A1CF	100	67.715	Ursus_americanus
ENSPMEG00000000921	a1cf	100	67.974	ENSUMAG00000011162	A1CF	100	66.503	Ursus_maritimus
ENSPMEG00000000921	a1cf	86	65.720	ENSVPAG00000006130	A1CF	86	64.015	Vicugna_pacos
ENSPMEG00000000921	a1cf	100	69.702	ENSVVUG00000002504	A1CF	100	68.046	Vulpes_vulpes
ENSPMEG00000000921	a1cf	100	68.464	ENSXETG00000006611	a1cf	100	67.647	Xenopus_tropicalis
ENSPMEG00000000921	a1cf	100	88.119	ENSXCOG00000003302	a1cf	100	87.459	Xiphophorus_couchianus
ENSPMEG00000000921	a1cf	100	86.971	ENSXMAG00000016703	a1cf	100	86.319	Xiphophorus_maculatus