EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSPMEG00000000955 (Gene tree)
Gene ID: 106906146
Gene Symbol: tbrg1
Alias: -
Full Name: transforming growth factor beta regulator 1
Gene Type: protein_coding
Species: Poecilia_mexicana
Status: putative
Strand: Minus strand
Length: 9333 bases
Position: chrKQ553263.1:54964-64296
Accession: 106906146
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSPMEP00000000200	HARE-HTH	PF05066.13	1.3e-15	1	1
ENSPMEP00000021013	HARE-HTH	PF05066.13	1.3e-15	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSPMET00000016289	-	3459	XM_014971294	ENSPMEP00000021013	546 (aa)	XP_014826780	UPI00072E8A39
ENSPMET00000016287	-	4072	-	ENSPMEP00000000200	546 (aa)	-	UPI00072E8A39

Gene Model

Click here to download ENSPMEG00000000955's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSPMEG00000000955's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSPMEG00000000955	tbrg1	100	84.066	ENSAPOG00000017352	tbrg1	100	84.066	Acanthochromis_polyacanthus
ENSPMEG00000000955	tbrg1	92	80.906	ENSACIG00000021274	tbrg1	94	80.906	Amphilophus_citrinellus
ENSPMEG00000000955	tbrg1	100	83.700	ENSAOCG00000018605	tbrg1	100	83.700	Amphiprion_ocellaris
ENSPMEG00000000955	tbrg1	100	83.700	ENSAPEG00000022443	tbrg1	100	83.700	Amphiprion_percula
ENSPMEG00000000955	tbrg1	100	83.971	ENSATEG00000023537	tbrg1	100	83.971	Anabas_testudineus
ENSPMEG00000000955	tbrg1	100	82.514	ENSACLG00000000281	tbrg1	100	82.514	Astatotilapia_calliptera
ENSPMEG00000000955	tbrg1	97	68.450	ENSAMXG00000008381	tbrg1	91	70.809	Astyanax_mexicanus
ENSPMEG00000000955	tbrg1	100	80.727	ENSCSEG00000002445	tbrg1	100	79.964	Cynoglossus_semilaevis
ENSPMEG00000000955	tbrg1	100	90.842	ENSCVAG00000019626	tbrg1	100	89.744	Cyprinodon_variegatus
ENSPMEG00000000955	tbrg1	94	71.206	ENSDARG00000074996	tbrg1	93	71.595	Danio_rerio
ENSPMEG00000000955	tbrg1	91	48.907	ENSEBUG00000014060	tbrg1	90	48.713	Eptatretus_burgeri
ENSPMEG00000000955	tbrg1	99	74.638	ENSELUG00000017458	tbrg1	99	74.275	Esox_lucius
ENSPMEG00000000955	tbrg1	88	85.193	ENSFHEG00000004283	tbrg1	92	85.193	Fundulus_heteroclitus
ENSPMEG00000000955	tbrg1	100	97.436	ENSGAFG00000000204	tbrg1	100	97.436	Gambusia_affinis
ENSPMEG00000000955	tbrg1	100	82.514	ENSHBUG00000004935	tbrg1	100	82.514	Haplochromis_burtoni
ENSPMEG00000000955	tbrg1	100	73.105	ENSHCOG00000010588	tbrg1	100	72.744	Hippocampus_comes
ENSPMEG00000000955	tbrg1	92	71.457	ENSIPUG00000008697	tbrg1	93	71.154	Ictalurus_punctatus
ENSPMEG00000000955	tbrg1	100	83.242	ENSKMAG00000002775	tbrg1	100	83.789	Kryptolebias_marmoratus
ENSPMEG00000000955	tbrg1	99	81.901	ENSLBEG00000017559	tbrg1	94	82.711	Labrus_bergylta
ENSPMEG00000000955	tbrg1	100	70.968	ENSLOCG00000003093	tbrg1	93	73.040	Lepisosteus_oculatus
ENSPMEG00000000955	tbrg1	100	83.242	ENSMAMG00000000876	tbrg1	100	83.242	Mastacembelus_armatus
ENSPMEG00000000955	tbrg1	100	82.514	ENSMZEG00005013545	tbrg1	92	82.514	Maylandia_zebra
ENSPMEG00000000955	tbrg1	95	77.290	ENSMMOG00000005314	tbrg1	92	78.627	Mola_mola
ENSPMEG00000000955	tbrg1	94	83.689	ENSMALG00000011630	tbrg1	99	83.689	Monopterus_albus
ENSPMEG00000000955	tbrg1	98	81.633	ENSNBRG00000017490	tbrg1	100	81.633	Neolamprologus_brichardi
ENSPMEG00000000955	tbrg1	100	82.878	ENSONIG00000005284	tbrg1	100	82.878	Oreochromis_niloticus
ENSPMEG00000000955	tbrg1	100	79.417	ENSORLG00000014519	tbrg1	100	78.142	Oryzias_latipes
ENSPMEG00000000955	tbrg1	100	78.506	ENSORLG00020009567	tbrg1	100	77.231	Oryzias_latipes_hni
ENSPMEG00000000955	tbrg1	100	79.417	ENSORLG00015000448	tbrg1	100	78.142	Oryzias_latipes_hsok
ENSPMEG00000000955	tbrg1	100	79.964	ENSOMEG00000006130	tbrg1	100	79.053	Oryzias_melastigma
ENSPMEG00000000955	tbrg1	95	72.031	ENSPKIG00000012274	tbrg1	89	72.000	Paramormyrops_kingsleyae
ENSPMEG00000000955	tbrg1	100	76.449	ENSPMGG00000015968	tbrg1	100	75.993	Periophthalmus_magnuspinnatus
ENSPMEG00000000955	tbrg1	100	99.817	ENSPFOG00000004279	tbrg1	100	99.817	Poecilia_formosa
ENSPMEG00000000955	tbrg1	100	99.084	ENSPLAG00000001227	tbrg1	100	99.084	Poecilia_latipinna
ENSPMEG00000000955	tbrg1	100	97.070	ENSPREG00000005246	tbrg1	100	97.070	Poecilia_reticulata
ENSPMEG00000000955	tbrg1	88	81.705	ENSPNYG00000012625	tbrg1	100	81.705	Pundamilia_nyererei
ENSPMEG00000000955	tbrg1	97	68.807	ENSPNAG00000028332	tbrg1	96	70.303	Pygocentrus_nattereri
ENSPMEG00000000955	tbrg1	92	73.930	ENSSFOG00015009308	tbrg1	86	74.125	Scleropages_formosus
ENSPMEG00000000955	tbrg1	100	80.586	ENSSMAG00000002529	tbrg1	100	80.586	Scophthalmus_maximus
ENSPMEG00000000955	tbrg1	99	85.558	ENSSDUG00000013674	tbrg1	99	85.558	Seriola_dumerili
ENSPMEG00000000955	tbrg1	93	84.496	ENSSLDG00000008932	tbrg1	98	84.496	Seriola_lalandi_dorsalis
ENSPMEG00000000955	tbrg1	86	83.761	ENSSPAG00000004808	tbrg1	99	83.761	Stegastes_partitus
ENSPMEG00000000955	tbrg1	95	77.351	ENSTRUG00000005960	tbrg1	98	77.543	Takifugu_rubripes
ENSPMEG00000000955	tbrg1	100	97.070	ENSXMAG00000001551	tbrg1	100	97.070	Xiphophorus_maculatus