EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSPMEG00000001010 (Gene tree)
Gene ID: 106923449
Gene Symbol: -
Alias: -
Full Name: elongation factor 1-alpha
Gene Type: protein_coding
Species: Poecilia_mexicana
Status: putative
Strand: Minus strand
Length: 2598 bases
Position: chrKQ551015.1:247374-249971
Accession: 106923449
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSPMEP00000000256	GTP_EFTU	PF00009.27	2.5e-53	1	1
ENSPMEP00000000256	GTP_EFTU_D2	PF03144.25	3.3e-15	1	1
ENSPMEP00000000256	GTP_EFTU_D3	PF03143.17	3e-42	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSPMET00000016184	-	1386	XM_014996481	ENSPMEP00000000256	461 (aa)	XP_014851967	UPI00072EA092

Gene Model

Click here to download ENSPMEG00000001010's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSPMEG00000001010's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSPMEG00000001010	-	95	42.563	ENSPMEG00000000925	hbs1l	64	42.563
ENSPMEG00000001010	-	100	67.896	ENSPMEG00000015233	si:dkey-37o8.1	98	68.904
ENSPMEG00000001010	-	100	86.797	ENSPMEG00000019928	eef1a1b	98	87.389
ENSPMEG00000001010	-	100	87.013	ENSPMEG00000003454	EEF1A1	98	87.389
ENSPMEG00000001010	-	100	89.827	ENSPMEG00000001013	-	97	90.625
ENSPMEG00000001010	-	95	38.322	ENSPMEG00000007020	-	81	37.063
ENSPMEG00000001010	-	95	38.952	ENSPMEG00000022359	gspt1l	76	38.952

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSPMEG00000001010	-	98	93.570	ENSAPOG00000004714	-	98	93.570	Acanthochromis_polyacanthus
ENSPMEG00000001010	-	90	94.189	ENSACIG00000001219	-	97	94.293	Amphilophus_citrinellus
ENSPMEG00000001010	-	87	95.037	ENSAOCG00000022002	-	98	95.037	Amphiprion_ocellaris
ENSPMEG00000001010	-	100	90.239	ENSAOCG00000022039	-	98	90.687	Amphiprion_ocellaris
ENSPMEG00000001010	-	100	90.889	ENSAPEG00000016361	-	98	91.353	Amphiprion_percula
ENSPMEG00000001010	-	98	96.009	ENSATEG00000003244	-	95	96.009	Anabas_testudineus
ENSPMEG00000001010	-	100	94.143	ENSACLG00000022560	-	98	94.235	Astatotilapia_calliptera
ENSPMEG00000001010	-	100	82.468	WBGene00001169	eef-1A.2	98	82.965	Caenorhabditis_elegans
ENSPMEG00000001010	-	100	82.468	WBGene00001168	eef-1A.1	98	82.965	Caenorhabditis_elegans
ENSPMEG00000001010	-	99	84.498	ENSCING00000021478	-	98	85.078	Ciona_intestinalis
ENSPMEG00000001010	-	98	80.617	ENSCING00000018894	-	97	80.617	Ciona_intestinalis
ENSPMEG00000001010	-	100	78.326	ENSCING00000007703	-	97	78.509	Ciona_intestinalis
ENSPMEG00000001010	-	98	81.099	ENSCING00000005126	-	98	81.099	Ciona_intestinalis
ENSPMEG00000001010	-	99	75.817	ENSCSAVG00000001085	-	89	76.906	Ciona_savignyi
ENSPMEG00000001010	-	99	84.683	ENSCSAVG00000006357	-	96	94.000	Ciona_savignyi
ENSPMEG00000001010	-	98	80.828	ENSCSAVG00000003196	-	98	80.828	Ciona_savignyi
ENSPMEG00000001010	-	98	81.978	ENSCSAVG00000009663	-	98	81.978	Ciona_savignyi
ENSPMEG00000001010	-	90	85.990	ENSCSEG00000007972	-	98	86.386	Cynoglossus_semilaevis
ENSPMEG00000001010	-	98	95.122	ENSCSEG00000008011	-	98	95.122	Cynoglossus_semilaevis
ENSPMEG00000001010	-	89	85.922	ENSCSEG00000007992	-	97	86.104	Cynoglossus_semilaevis
ENSPMEG00000001010	-	100	98.698	ENSCVAG00000019356	-	100	98.698	Cyprinodon_variegatus
ENSPMEG00000001010	-	98	85.841	FBgn0000557	eEF1alpha2	98	85.841	Drosophila_melanogaster
ENSPMEG00000001010	-	100	87.013	FBgn0284245	eEF1alpha1	97	87.500	Drosophila_melanogaster
ENSPMEG00000001010	-	99	82.826	ENSEBUG00000015814	-	98	83.370	Eptatretus_burgeri
ENSPMEG00000001010	-	100	98.048	ENSFHEG00000015054	-	100	98.048	Fundulus_heteroclitus
ENSPMEG00000001010	-	100	99.566	ENSGAFG00000014646	-	100	99.566	Gambusia_affinis
ENSPMEG00000001010	-	100	93.275	ENSGACG00000002143	-	98	93.570	Gasterosteus_aculeatus
ENSPMEG00000001010	-	98	95.344	ENSGACG00000002182	-	98	95.344	Gasterosteus_aculeatus
ENSPMEG00000001010	-	56	91.016	ENSHBUG00000017166	-	92	91.057	Haplochromis_burtoni
ENSPMEG00000001010	-	98	95.565	ENSHCOG00000008468	-	98	95.565	Hippocampus_comes
ENSPMEG00000001010	-	99	85.033	ENSHCOG00000008489	-	97	85.268	Hippocampus_comes
ENSPMEG00000001010	-	99	84.565	ENSLBEG00000002955	-	98	84.701	Labrus_bergylta
ENSPMEG00000001010	-	98	94.678	ENSLBEG00000002759	-	98	94.678	Labrus_bergylta
ENSPMEG00000001010	-	100	97.397	ENSMAMG00000007715	-	100	97.397	Mastacembelus_armatus
ENSPMEG00000001010	-	99	76.535	ENSMMOG00000018160	-	95	86.957	Mola_mola
ENSPMEG00000001010	-	98	92.905	ENSMMOG00000001165	-	100	94.444	Mola_mola
ENSPMEG00000001010	-	99	86.087	ENSMMOG00000001106	-	98	86.475	Mola_mola
ENSPMEG00000001010	-	100	82.900	ENSNBRG00000017346	-	97	82.743	Neolamprologus_brichardi
ENSPMEG00000001010	-	76	91.477	ENSONIG00000017760	-	98	91.477	Oreochromis_niloticus
ENSPMEG00000001010	-	100	96.963	ENSORLG00000007614	eef1a	100	96.963	Oryzias_latipes
ENSPMEG00000001010	-	100	96.963	ENSORLG00015002397	-	100	96.963	Oryzias_latipes_hsok
ENSPMEG00000001010	-	100	98.048	ENSOMEG00000018226	-	100	98.048	Oryzias_melastigma
ENSPMEG00000001010	-	95	48.519	ENSPMGG00000022427	-	97	60.000	Periophthalmus_magnuspinnatus
ENSPMEG00000001010	-	98	94.690	ENSPMGG00000023911	-	100	97.674	Periophthalmus_magnuspinnatus
ENSPMEG00000001010	-	100	99.783	ENSPFOG00000003924	-	100	99.758	Poecilia_formosa
ENSPMEG00000001010	-	100	99.783	ENSPLAG00000004316	-	100	99.783	Poecilia_latipinna
ENSPMEG00000001010	-	100	99.566	ENSPREG00000008243	-	100	99.566	Poecilia_reticulata
ENSPMEG00000001010	-	100	94.143	ENSPNYG00000007263	-	98	94.235	Pundamilia_nyererei
ENSPMEG00000001010	-	97	81.124	YPR080W	TEF1	98	80.488	Saccharomyces_cerevisiae
ENSPMEG00000001010	-	97	81.124	YBR118W	TEF2	98	80.488	Saccharomyces_cerevisiae
ENSPMEG00000001010	-	53	92.623	ENSSMAG00000016277	-	96	92.623	Scophthalmus_maximus
ENSPMEG00000001010	-	98	83.298	ENSSMAG00000018469	-	98	83.298	Scophthalmus_maximus
ENSPMEG00000001010	-	98	96.009	ENSSDUG00000008198	-	98	96.009	Seriola_dumerili
ENSPMEG00000001010	-	98	93.792	ENSSPAG00000001710	-	98	93.792	Stegastes_partitus
ENSPMEG00000001010	-	98	95.787	ENSTRUG00000005727	ef-1a	98	95.787	Takifugu_rubripes
ENSPMEG00000001010	-	99	86.087	ENSTRUG00000005066	-	98	86.475	Takifugu_rubripes
ENSPMEG00000001010	-	99	82.174	ENSTNIG00000002617	-	94	83.964	Tetraodon_nigroviridis
ENSPMEG00000001010	-	98	94.900	ENSTNIG00000002619	-	98	94.900	Tetraodon_nigroviridis
ENSPMEG00000001010	-	100	99.783	ENSXCOG00000001542	-	100	100.000	Xiphophorus_couchianus