EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSPMEG00000001025 (Gene tree)
Gene ID: 106923334
Gene Symbol: -
Alias: -
Full Name: splicing factor%2C proline- and glutamine-rich-like
Gene Type: protein_coding
Species: Poecilia_mexicana
Status: putative
Strand: Minus strand
Length: 23048 bases
Position: chrKQ551015.1:154417-177464
Accession: 106923334
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSPMEP00000021076	RRM_1	PF00076.22	1e-30	1	2
ENSPMEP00000021076	RRM_1	PF00076.22	1e-30	2	2
ENSPMEP00000021077	RRM_1	PF00076.22	1.1e-30	1	2
ENSPMEP00000021077	RRM_1	PF00076.22	1.1e-30	2	2

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSPMET00000016161	-	2088	-	ENSPMEP00000021076	695 (aa)	-	-
ENSPMET00000016162	-	2175	XM_014996319	ENSPMEP00000021077	724 (aa)	XP_014851805	UPI00072E0EDE

Gene Model

Click here to download ENSPMEG00000001025's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSPMEG00000001025's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSPMEG00000001025	-	59	53.659	ENSPMEG00000008322	pspc1	62	60.185

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSPMEG00000001025	-	51	60.647	ENSG00000121390	PSPC1	79	69.388	Homo_sapiens
ENSPMEG00000001025	-	52	55.128	ENSAPOG00000015946	pspc1	82	54.839	Acanthochromis_polyacanthus
ENSPMEG00000001025	-	51	60.753	ENSAMEG00000017420	PSPC1	69	65.278	Ailuropoda_melanoleuca
ENSPMEG00000001025	-	55	53.528	ENSAOCG00000005279	pspc1	82	54.691	Amphiprion_ocellaris
ENSPMEG00000001025	-	55	53.528	ENSAPEG00000015927	pspc1	83	54.462	Amphiprion_percula
ENSPMEG00000001025	-	55	72.165	ENSAPLG00000003643	SFPQ	83	67.824	Anas_platyrhynchos
ENSPMEG00000001025	-	58	66.362	ENSACAG00000013307	-	68	66.133	Anolis_carolinensis
ENSPMEG00000001025	-	50	68.091	ENSACAG00000002093	PSPC1	69	66.120	Anolis_carolinensis
ENSPMEG00000001025	-	52	60.638	ENSANAG00000000059	PSPC1	76	68.667	Aotus_nancymaae
ENSPMEG00000001025	-	54	59.640	ENSBTAG00000003934	PSPC1	70	63.926	Bos_taurus
ENSPMEG00000001025	-	52	60.638	ENSCJAG00000004554	PSPC1	69	65.110	Callithrix_jacchus
ENSPMEG00000001025	-	51	60.811	ENSCAFG00020002009	PSPC1	76	68.919	Canis_lupus_dingo
ENSPMEG00000001025	-	54	59.640	ENSCHIG00000016708	PSPC1	70	63.926	Capra_hircus
ENSPMEG00000001025	-	51	60.377	ENSCPOG00000000395	PSPC1	76	68.581	Cavia_porcellus
ENSPMEG00000001025	-	52	60.638	ENSCCAG00000033498	PSPC1	69	65.110	Cebus_capucinus
ENSPMEG00000001025	-	51	60.377	ENSCATG00000036434	PSPC1	82	68.581	Cercocebus_atys
ENSPMEG00000001025	-	50	67.521	ENSCPBG00000020859	PSPC1	67	67.521	Chrysemys_picta_bellii
ENSPMEG00000001025	-	53	60.105	ENSCGRG00001018368	Pspc1	70	64.499	Cricetulus_griseus_chok1gshd
ENSPMEG00000001025	-	53	60.105	ENSCGRG00000011724	Pspc1	70	64.499	Cricetulus_griseus_crigri
ENSPMEG00000001025	-	60	54.739	ENSDARG00000006621	pspc1	77	57.413	Danio_rerio
ENSPMEG00000001025	-	51	60.377	ENSDNOG00000011078	PSPC1	68	64.835	Dasypus_novemcinctus
ENSPMEG00000001025	-	51	58.537	ENSDORG00000016050	Pspc1	67	63.025	Dipodomys_ordii
ENSPMEG00000001025	-	52	65.416	ENSEBUG00000003964	-	81	56.432	Eptatretus_burgeri
ENSPMEG00000001025	-	51	60.705	ENSEASG00005000119	PSPC1	78	67.763	Equus_asinus_asinus
ENSPMEG00000001025	-	51	60.705	ENSECAG00000017286	PSPC1	78	67.763	Equus_caballus
ENSPMEG00000001025	-	51	60.647	ENSFCAG00000027841	PSPC1	76	68.919	Felis_catus
ENSPMEG00000001025	-	50	68.091	ENSFALG00000008750	PSPC1	68	66.758	Ficedula_albicollis
ENSPMEG00000001025	-	53	59.375	ENSFDAG00000002617	PSPC1	72	63.710	Fukomys_damarensis
ENSPMEG00000001025	-	50	68.091	ENSGALG00000017142	PSPC1	67	67.416	Gallus_gallus
ENSPMEG00000001025	-	50	67.521	ENSGAGG00000019164	PSPC1	67	67.521	Gopherus_agassizii
ENSPMEG00000001025	-	51	60.647	ENSGGOG00000003414	PSPC1	75	68.919	Gorilla_gorilla
ENSPMEG00000001025	-	58	51.893	ENSHBUG00000001139	pspc1	83	52.242	Haplochromis_burtoni
ENSPMEG00000001025	-	51	60.484	ENSHGLG00000018811	PSPC1	69	65.000	Heterocephalus_glaber_female
ENSPMEG00000001025	-	52	64.525	ENSIPUG00000013192	pspc1	73	61.757	Ictalurus_punctatus
ENSPMEG00000001025	-	51	60.484	ENSSTOG00000026833	PSPC1	75	68.581	Ictidomys_tridecemlineatus
ENSPMEG00000001025	-	51	60.647	ENSJJAG00000018334	Pspc1	68	65.278	Jaculus_jaculus
ENSPMEG00000001025	-	57	51.591	ENSLBEG00000004474	pspc1	81	50.797	Labrus_bergylta
ENSPMEG00000001025	-	53	59.413	ENSLOCG00000010832	pspc1	75	59.494	Lepisosteus_oculatus
ENSPMEG00000001025	-	53	62.698	ENSLAFG00000010968	PSPC1	70	64.324	Loxodonta_africana
ENSPMEG00000001025	-	51	60.647	ENSMFAG00000032728	PSPC1	83	68.919	Macaca_fascicularis
ENSPMEG00000001025	-	51	60.647	ENSMMUG00000020262	PSPC1	80	68.919	Macaca_mulatta
ENSPMEG00000001025	-	51	60.647	ENSMNEG00000027401	PSPC1	76	65.278	Macaca_nemestrina
ENSPMEG00000001025	-	52	54.233	ENSMAMG00000004333	pspc1	78	51.300	Mastacembelus_armatus
ENSPMEG00000001025	-	53	59.621	ENSMAUG00000021067	Pspc1	78	55.914	Mesocricetus_auratus
ENSPMEG00000001025	-	52	60.638	ENSMICG00000013970	PSPC1	76	68.667	Microcebus_murinus
ENSPMEG00000001025	-	51	60.976	ENSMOCG00000006060	Pspc1	68	65.546	Microtus_ochrogaster
ENSPMEG00000001025	-	52	65.110	ENSMODG00000008029	PSPC1	58	65.110	Monodelphis_domestica
ENSPMEG00000001025	-	53	53.398	ENSMALG00000008914	pspc1	84	51.577	Monopterus_albus
ENSPMEG00000001025	-	53	64.770	MGP_CAROLIEiJ_G0019341	Pspc1	84	71.429	Mus_caroli
ENSPMEG00000001025	-	53	64.770	ENSMUSG00000021938	Pspc1	83	71.429	Mus_musculus
ENSPMEG00000001025	-	53	64.770	MGP_PahariEiJ_G0030359	Pspc1	84	71.429	Mus_pahari
ENSPMEG00000001025	-	53	64.770	MGP_SPRETEiJ_G0020232	Pspc1	84	71.429	Mus_spretus
ENSPMEG00000001025	-	51	60.647	ENSMPUG00000013347	PSPC1	69	65.278	Mustela_putorius_furo
ENSPMEG00000001025	-	50	60.054	ENSMLUG00000017663	PSPC1	68	64.607	Myotis_lucifugus
ENSPMEG00000001025	-	53	60.367	ENSNGAG00000011271	Pspc1	70	64.770	Nannospalax_galili
ENSPMEG00000001025	-	51	60.647	ENSNLEG00000001294	PSPC1	68	65.278	Nomascus_leucogenys
ENSPMEG00000001025	-	51	61.625	ENSODEG00000019012	-	70	60.000	Octodon_degus
ENSPMEG00000001025	-	51	52.198	ENSODEG00000007817	-	69	50.928	Octodon_degus
ENSPMEG00000001025	-	59	51.770	ENSONIG00000012010	pspc1	83	52.242	Oreochromis_niloticus
ENSPMEG00000001025	-	51	60.377	ENSOCUG00000006153	PSPC1	69	64.835	Oryctolagus_cuniculus
ENSPMEG00000001025	-	53	54.054	ENSORLG00000004232	-	81	53.555	Oryzias_latipes
ENSPMEG00000001025	-	53	56.468	ENSORLG00020000578	PSPC1	84	52.283	Oryzias_latipes_hni
ENSPMEG00000001025	-	53	55.970	ENSORLG00015017480	pspc1	84	52.055	Oryzias_latipes_hsok
ENSPMEG00000001025	-	52	60.638	ENSOGAG00000012643	PSPC1	68	65.110	Otolemur_garnettii
ENSPMEG00000001025	-	50	61.602	ENSOARG00000014163	PSPC1	72	63.218	Ovis_aries
ENSPMEG00000001025	-	51	60.647	ENSPPRG00000008833	PSPC1	69	65.278	Panthera_pardus
ENSPMEG00000001025	-	51	60.647	ENSPTRG00000005677	PSPC1	79	67.742	Pan_troglodytes
ENSPMEG00000001025	-	51	60.647	ENSPANG00000001992	PSPC1	81	68.919	Papio_anubis
ENSPMEG00000001025	-	54	62.368	ENSPKIG00000003578	pspc1	73	61.697	Paramormyrops_kingsleyae
ENSPMEG00000001025	-	50	67.236	ENSPSIG00000005168	PSPC1	66	67.236	Pelodiscus_sinensis
ENSPMEG00000001025	-	53	60.367	ENSPEMG00000015214	Pspc1	70	64.770	Peromyscus_maniculatus_bairdii
ENSPMEG00000001025	-	52	65.110	ENSPCIG00000017680	PSPC1	69	65.110	Phascolarctos_cinereus
ENSPMEG00000001025	-	59	53.437	ENSPFOG00000003362	pspc1	62	59.877	Poecilia_formosa
ENSPMEG00000001025	-	59	53.437	ENSPLAG00000011540	pspc1	62	59.877	Poecilia_latipinna
ENSPMEG00000001025	-	100	98.069	ENSPLAG00000004407	-	100	98.069	Poecilia_latipinna
ENSPMEG00000001025	-	59	53.437	ENSPREG00000007786	pspc1	62	59.877	Poecilia_reticulata
ENSPMEG00000001025	-	50	61.326	ENSPPYG00000005186	PSPC1	77	64.674	Pongo_abelii
ENSPMEG00000001025	-	51	61.035	ENSPVAG00000005036	PSPC1	70	64.402	Pteropus_vampyrus
ENSPMEG00000001025	-	53	60.367	ENSRNOG00000020782	Pspc1	79	64.770	Rattus_norvegicus
ENSPMEG00000001025	-	51	60.753	ENSRBIG00000036057	PSPC1	95	66.667	Rhinopithecus_bieti
ENSPMEG00000001025	-	51	60.753	ENSRROG00000036334	PSPC1	75	68.919	Rhinopithecus_roxellana
ENSPMEG00000001025	-	52	60.383	ENSSHAG00000004696	PSPC1	69	60.383	Sarcophilus_harrisii
ENSPMEG00000001025	-	54	59.847	ENSSFOG00015001395	pspc1	81	59.278	Scleropages_formosus
ENSPMEG00000001025	-	53	54.523	ENSSDUG00000010651	pspc1	77	53.647	Seriola_dumerili
ENSPMEG00000001025	-	58	63.532	ENSSPUG00000001136	-	93	48.777	Sphenodon_punctatus
ENSPMEG00000001025	-	52	57.407	ENSSPAG00000001921	pspc1	79	53.917	Stegastes_partitus
ENSPMEG00000001025	-	51	61.475	ENSSSCG00000009569	PSPC1	77	69.000	Sus_scrofa
ENSPMEG00000001025	-	50	68.091	ENSTGUG00000011295	PSPC1	75	68.091	Taeniopygia_guttata
ENSPMEG00000001025	-	55	50.355	ENSTRUG00000011335	pspc1	79	50.238	Takifugu_rubripes
ENSPMEG00000001025	-	52	53.299	ENSTNIG00000010358	pspc1	90	47.974	Tetraodon_nigroviridis
ENSPMEG00000001025	-	52	60.904	ENSTTRG00000003343	PSPC1	69	65.385	Tursiops_truncatus
ENSPMEG00000001025	-	51	60.484	ENSUMAG00000013993	PSPC1	83	68.581	Ursus_maritimus
ENSPMEG00000001025	-	51	60.811	ENSVVUG00000006414	PSPC1	77	68.919	Vulpes_vulpes