EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSPMEG00000001051 (Gene tree)
Gene ID: 106923218
Gene Symbol: ssb
Alias: -
Full Name: Sjogren syndrome antigen B
Gene Type: protein_coding
Species: Poecilia_mexicana
Status: putative
Strand: Plus strand
Length: 8945 bases
Position: chrKQ551014.1:745933-754877
Accession: 106923218
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSPMEP00000021089	RRM_1	PF00076.22	2.4e-13	1	1
ENSPMEP00000021089	RRM_3	PF08777.11	2.3e-28	1	1
ENSPMEP00000021089	La	PF05383.17	3.8e-20	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSPMET00000016130	-	3782	XM_014996147	ENSPMEP00000021089	400 (aa)	XP_014851633	UPI00072E6E1B

Gene Model

Click here to download ENSPMEG00000001051's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSPMEG00000001051's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSPMEG00000001051	ssb	100	55.990	ENSG00000138385	SSB	98	63.559	Homo_sapiens
ENSPMEG00000001051	ssb	100	83.500	ENSAPOG00000003448	ssb	100	83.500	Acanthochromis_polyacanthus
ENSPMEG00000001051	ssb	100	55.131	ENSAMEG00000010507	SSB	99	55.131	Ailuropoda_melanoleuca
ENSPMEG00000001051	ssb	93	79.730	ENSACIG00000001738	ssb	97	79.088	Amphilophus_citrinellus
ENSPMEG00000001051	ssb	100	83.500	ENSAOCG00000020398	ssb	100	83.500	Amphiprion_ocellaris
ENSPMEG00000001051	ssb	100	83.500	ENSAPEG00000020395	ssb	100	83.500	Amphiprion_percula
ENSPMEG00000001051	ssb	100	83.500	ENSATEG00000016884	ssb	100	83.500	Anabas_testudineus
ENSPMEG00000001051	ssb	100	53.428	ENSAPLG00000006109	SSB	99	53.318	Anas_platyrhynchos
ENSPMEG00000001051	ssb	100	54.258	ENSACAG00000017008	SSB	99	54.015	Anolis_carolinensis
ENSPMEG00000001051	ssb	100	50.739	ENSANAG00000027195	-	99	49.754	Aotus_nancymaae
ENSPMEG00000001051	ssb	100	75.312	ENSACLG00000010798	ssb	100	75.312	Astatotilapia_calliptera
ENSPMEG00000001051	ssb	100	61.463	ENSAMXG00000012606	ssb	100	62.195	Astyanax_mexicanus
ENSPMEG00000001051	ssb	100	57.778	ENSBTAG00000008716	SSB	99	57.284	Bos_taurus
ENSPMEG00000001051	ssb	75	35.082	WBGene00016653	C44E4.4	76	35.082	Caenorhabditis_elegans
ENSPMEG00000001051	ssb	100	56.650	ENSCJAG00000045073	SSB	99	56.404	Callithrix_jacchus
ENSPMEG00000001051	ssb	100	57.248	ENSCAFG00000012418	SSB	99	56.757	Canis_familiaris
ENSPMEG00000001051	ssb	100	57.248	ENSCAFG00020002900	SSB	99	56.757	Canis_lupus_dingo
ENSPMEG00000001051	ssb	100	53.202	ENSCHIG00000022196	-	99	53.448	Capra_hircus
ENSPMEG00000001051	ssb	100	56.897	ENSCHIG00000022624	-	99	56.404	Capra_hircus
ENSPMEG00000001051	ssb	99	56.790	ENSTSYG00000000097	SSB	99	56.296	Carlito_syrichta
ENSPMEG00000001051	ssb	100	57.635	ENSCPOG00000003338	SSB	99	57.143	Cavia_porcellus
ENSPMEG00000001051	ssb	100	56.404	ENSCCAG00000035147	SSB	99	56.158	Cebus_capucinus
ENSPMEG00000001051	ssb	72	52.234	ENSCATG00000036701	SSB	83	51.890	Cercocebus_atys
ENSPMEG00000001051	ssb	98	43.577	ENSCATG00000042909	-	96	43.073	Cercocebus_atys
ENSPMEG00000001051	ssb	100	56.897	ENSCLAG00000015617	-	99	56.404	Chinchilla_lanigera
ENSPMEG00000001051	ssb	98	52.261	ENSCSAG00000018390	-	97	52.685	Chlorocebus_sabaeus
ENSPMEG00000001051	ssb	100	56.650	ENSCSAG00000015200	SSB	88	56.404	Chlorocebus_sabaeus
ENSPMEG00000001051	ssb	100	56.404	ENSCHOG00000007763	SSB	99	55.911	Choloepus_hoffmanni
ENSPMEG00000001051	ssb	100	58.780	ENSCPBG00000006519	SSB	99	59.268	Chrysemys_picta_bellii
ENSPMEG00000001051	ssb	100	49.015	ENSCANG00000033240	-	99	48.030	Colobus_angolensis_palliatus
ENSPMEG00000001051	ssb	93	45.455	ENSCANG00000028838	-	88	45.455	Colobus_angolensis_palliatus
ENSPMEG00000001051	ssb	100	56.650	ENSCANG00000027695	SSB	99	56.404	Colobus_angolensis_palliatus
ENSPMEG00000001051	ssb	100	51.843	ENSCGRG00001024831	Ssb	99	51.843	Cricetulus_griseus_chok1gshd
ENSPMEG00000001051	ssb	100	51.843	ENSCGRG00000005387	Ssb	99	51.843	Cricetulus_griseus_crigri
ENSPMEG00000001051	ssb	99	81.726	ENSCSEG00000011599	ssb	99	81.726	Cynoglossus_semilaevis
ENSPMEG00000001051	ssb	100	87.032	ENSCVAG00000021558	ssb	100	87.531	Cyprinodon_variegatus
ENSPMEG00000001051	ssb	100	65.185	ENSDARG00000029252	ssb	100	65.185	Danio_rerio
ENSPMEG00000001051	ssb	100	56.650	ENSDNOG00000013450	SSB	99	56.158	Dasypus_novemcinctus
ENSPMEG00000001051	ssb	100	52.334	ENSDORG00000005543	Ssb	99	52.334	Dipodomys_ordii
ENSPMEG00000001051	ssb	85	35.028	FBgn0011638	La	80	34.718	Drosophila_melanogaster
ENSPMEG00000001051	ssb	51	62.871	ENSETEG00000004614	-	52	62.871	Echinops_telfairi
ENSPMEG00000001051	ssb	98	46.056	ENSEBUG00000001237	ssb	96	45.038	Eptatretus_burgeri
ENSPMEG00000001051	ssb	100	57.389	ENSEASG00005022835	SSB	99	56.897	Equus_asinus_asinus
ENSPMEG00000001051	ssb	100	57.389	ENSECAG00000018495	SSB	99	56.897	Equus_caballus
ENSPMEG00000001051	ssb	76	47.403	ENSEEUG00000008077	SSB	78	47.403	Erinaceus_europaeus
ENSPMEG00000001051	ssb	100	69.059	ENSELUG00000020929	ssb	100	69.307	Esox_lucius
ENSPMEG00000001051	ssb	100	57.985	ENSFCAG00000011601	SSB	99	57.494	Felis_catus
ENSPMEG00000001051	ssb	99	55.774	ENSFALG00000000930	SSB	99	56.020	Ficedula_albicollis
ENSPMEG00000001051	ssb	100	57.143	ENSFDAG00000000598	SSB	99	56.650	Fukomys_damarensis
ENSPMEG00000001051	ssb	74	85.430	ENSFHEG00000003268	ssb	96	84.665	Fundulus_heteroclitus
ENSPMEG00000001051	ssb	99	71.393	ENSGMOG00000002664	ssb	100	70.647	Gadus_morhua
ENSPMEG00000001051	ssb	99	55.610	ENSGALG00000009677	SSB	99	54.523	Gallus_gallus
ENSPMEG00000001051	ssb	100	96.526	ENSGAFG00000002749	ssb	100	96.526	Gambusia_affinis
ENSPMEG00000001051	ssb	100	77.833	ENSGACG00000005107	ssb	100	77.833	Gasterosteus_aculeatus
ENSPMEG00000001051	ssb	100	58.780	ENSGAGG00000007807	SSB	99	58.780	Gopherus_agassizii
ENSPMEG00000001051	ssb	100	48.276	ENSGGOG00000024891	-	99	48.768	Gorilla_gorilla
ENSPMEG00000001051	ssb	54	53.394	ENSGGOG00000023471	-	89	52.941	Gorilla_gorilla
ENSPMEG00000001051	ssb	100	75.561	ENSHBUG00000006584	ssb	100	75.561	Haplochromis_burtoni
ENSPMEG00000001051	ssb	100	51.843	ENSHGLG00000004478	-	99	51.351	Heterocephalus_glaber_female
ENSPMEG00000001051	ssb	100	56.796	ENSHGLG00000017580	-	99	56.448	Heterocephalus_glaber_female
ENSPMEG00000001051	ssb	100	51.365	ENSHGLG00000005832	-	99	50.124	Heterocephalus_glaber_female
ENSPMEG00000001051	ssb	100	56.796	ENSHGLG00100003084	-	99	56.448	Heterocephalus_glaber_male
ENSPMEG00000001051	ssb	100	51.365	ENSHGLG00100008767	-	99	50.868	Heterocephalus_glaber_male
ENSPMEG00000001051	ssb	99	75.696	ENSHCOG00000019011	ssb	99	75.949	Hippocampus_comes
ENSPMEG00000001051	ssb	100	63.504	ENSIPUG00000003681	SSB	100	63.504	Ictalurus_punctatus
ENSPMEG00000001051	ssb	100	56.404	ENSSTOG00000008416	SSB	99	55.911	Ictidomys_tridecemlineatus
ENSPMEG00000001051	ssb	100	50.952	ENSJJAG00000023158	-	99	50.358	Jaculus_jaculus
ENSPMEG00000001051	ssb	89	45.531	ENSJJAG00000016250	-	94	45.531	Jaculus_jaculus
ENSPMEG00000001051	ssb	100	84.500	ENSKMAG00000017317	ssb	100	84.500	Kryptolebias_marmoratus
ENSPMEG00000001051	ssb	100	83.750	ENSLBEG00000017345	ssb	100	83.750	Labrus_bergylta
ENSPMEG00000001051	ssb	100	55.012	ENSLACG00000014056	SSB	99	54.768	Latimeria_chalumnae
ENSPMEG00000001051	ssb	100	65.848	ENSLOCG00000007933	ssb	99	65.848	Lepisosteus_oculatus
ENSPMEG00000001051	ssb	74	42.712	ENSLAFG00000026721	-	97	42.712	Loxodonta_africana
ENSPMEG00000001051	ssb	100	52.969	ENSLAFG00000000867	-	99	53.207	Loxodonta_africana
ENSPMEG00000001051	ssb	100	48.395	ENSLAFG00000028909	-	99	47.901	Loxodonta_africana
ENSPMEG00000001051	ssb	100	56.650	ENSMFAG00000039066	SSB	99	56.404	Macaca_fascicularis
ENSPMEG00000001051	ssb	90	48.753	ENSMFAG00000041478	-	91	51.368	Macaca_fascicularis
ENSPMEG00000001051	ssb	100	48.894	ENSMMUG00000011724	-	97	48.276	Macaca_mulatta
ENSPMEG00000001051	ssb	100	56.650	ENSMMUG00000023051	SSB	99	56.404	Macaca_mulatta
ENSPMEG00000001051	ssb	98	42.821	ENSMMUG00000039889	-	97	42.821	Macaca_mulatta
ENSPMEG00000001051	ssb	90	48.753	ENSMNEG00000034698	-	91	51.368	Macaca_nemestrina
ENSPMEG00000001051	ssb	100	48.537	ENSMNEG00000028321	SSB	85	67.826	Macaca_nemestrina
ENSPMEG00000001051	ssb	100	39.259	ENSMLEG00000042644	-	99	38.519	Mandrillus_leucophaeus
ENSPMEG00000001051	ssb	100	56.650	ENSMLEG00000035717	SSB	88	67.826	Mandrillus_leucophaeus
ENSPMEG00000001051	ssb	100	83.250	ENSMAMG00000004800	ssb	100	83.250	Mastacembelus_armatus
ENSPMEG00000001051	ssb	100	75.312	ENSMZEG00005005749	ssb	100	75.312	Maylandia_zebra
ENSPMEG00000001051	ssb	99	56.098	ENSMGAG00000010328	SSB	95	61.929	Meleagris_gallopavo
ENSPMEG00000001051	ssb	98	50.503	ENSMICG00000033304	-	93	52.717	Microcebus_murinus
ENSPMEG00000001051	ssb	100	56.897	ENSMICG00000028252	-	99	56.404	Microcebus_murinus
ENSPMEG00000001051	ssb	100	42.716	ENSMODG00000019271	-	51	53.371	Monodelphis_domestica
ENSPMEG00000001051	ssb	100	38.177	ENSMODG00000007027	-	99	38.424	Monodelphis_domestica
ENSPMEG00000001051	ssb	100	54.745	ENSMODG00000008227	-	99	53.528	Monodelphis_domestica
ENSPMEG00000001051	ssb	91	81.096	ENSMALG00000008045	ssb	90	80.000	Monopterus_albus
ENSPMEG00000001051	ssb	100	52.038	MGP_CAROLIEiJ_G0023629	-	98	62.420	Mus_caroli
ENSPMEG00000001051	ssb	100	52.038	ENSMUSG00000068882	Ssb	98	62.420	Mus_musculus
ENSPMEG00000001051	ssb	100	51.799	MGP_PahariEiJ_G0025081	-	98	61.783	Mus_pahari
ENSPMEG00000001051	ssb	100	52.038	MGP_SPRETEiJ_G0024551	Ssb	98	62.420	Mus_spretus
ENSPMEG00000001051	ssb	100	57.389	ENSMPUG00000000785	SSB	99	56.897	Mustela_putorius_furo
ENSPMEG00000001051	ssb	100	55.422	ENSMLUG00000016316	SSB	99	55.181	Myotis_lucifugus
ENSPMEG00000001051	ssb	100	75.062	ENSNBRG00000012661	ssb	100	75.062	Neolamprologus_brichardi
ENSPMEG00000001051	ssb	100	56.404	ENSNLEG00000004958	SSB	99	56.158	Nomascus_leucogenys
ENSPMEG00000001051	ssb	95	42.147	ENSNLEG00000028754	-	78	45.482	Nomascus_leucogenys
ENSPMEG00000001051	ssb	62	61.200	ENSMEUG00000001650	-	100	61.200	Notamacropus_eugenii
ENSPMEG00000001051	ssb	94	56.000	ENSODEG00000004202	-	99	55.467	Octodon_degus
ENSPMEG00000001051	ssb	100	76.060	ENSONIG00000008776	ssb	100	76.060	Oreochromis_niloticus
ENSPMEG00000001051	ssb	100	55.665	ENSOANG00000008543	SSB	99	55.665	Ornithorhynchus_anatinus
ENSPMEG00000001051	ssb	100	55.911	ENSOCUG00000010396	SSB	99	55.665	Oryctolagus_cuniculus
ENSPMEG00000001051	ssb	100	80.500	ENSORLG00000017208	ssb	100	80.500	Oryzias_latipes
ENSPMEG00000001051	ssb	100	81.297	ENSORLG00020022574	ssb	100	81.297	Oryzias_latipes_hni
ENSPMEG00000001051	ssb	100	81.000	ENSORLG00015016592	ssb	100	81.000	Oryzias_latipes_hsok
ENSPMEG00000001051	ssb	100	82.045	ENSOMEG00000003193	ssb	100	82.045	Oryzias_melastigma
ENSPMEG00000001051	ssb	100	54.157	ENSOGAG00000029768	SSB	99	53.919	Otolemur_garnettii
ENSPMEG00000001051	ssb	100	56.897	ENSOARG00000002906	SSB	99	56.404	Ovis_aries
ENSPMEG00000001051	ssb	90	48.066	ENSPPAG00000006189	-	91	45.028	Pan_paniscus
ENSPMEG00000001051	ssb	100	48.276	ENSPPAG00000032427	-	100	58.140	Pan_paniscus
ENSPMEG00000001051	ssb	100	55.990	ENSPPAG00000042673	SSB	99	55.746	Pan_paniscus
ENSPMEG00000001051	ssb	100	57.985	ENSPPRG00000006599	SSB	99	57.494	Panthera_pardus
ENSPMEG00000001051	ssb	100	57.985	ENSPTIG00000011021	SSB	97	57.494	Panthera_tigris_altaica
ENSPMEG00000001051	ssb	100	55.990	ENSPTRG00000012620	SSB	99	55.746	Pan_troglodytes
ENSPMEG00000001051	ssb	100	46.059	ENSPTRG00000042880	-	99	46.305	Pan_troglodytes
ENSPMEG00000001051	ssb	98	42.569	ENSPANG00000034126	-	96	42.569	Papio_anubis
ENSPMEG00000001051	ssb	100	56.650	ENSPANG00000007440	SSB	99	56.404	Papio_anubis
ENSPMEG00000001051	ssb	95	39.583	ENSPANG00000031877	-	89	39.005	Papio_anubis
ENSPMEG00000001051	ssb	100	68.905	ENSPKIG00000019325	ssb	99	68.905	Paramormyrops_kingsleyae
ENSPMEG00000001051	ssb	100	58.049	ENSPSIG00000002265	SSB	93	58.537	Pelodiscus_sinensis
ENSPMEG00000001051	ssb	89	70.986	ENSPMGG00000020075	ssb	92	71.186	Periophthalmus_magnuspinnatus
ENSPMEG00000001051	ssb	89	44.875	ENSPMAG00000002982	ssb	87	45.119	Petromyzon_marinus
ENSPMEG00000001051	ssb	95	57.552	ENSPCIG00000028591	-	99	56.404	Phascolarctos_cinereus
ENSPMEG00000001051	ssb	100	99.250	ENSPFOG00000009650	ssb	100	99.250	Poecilia_formosa
ENSPMEG00000001051	ssb	100	98.750	ENSPLAG00000020498	ssb	100	98.750	Poecilia_latipinna
ENSPMEG00000001051	ssb	95	97.090	ENSPREG00000003708	ssb	99	97.090	Poecilia_reticulata
ENSPMEG00000001051	ssb	100	56.404	ENSPPYG00000012919	SSB	99	56.158	Pongo_abelii
ENSPMEG00000001051	ssb	95	55.208	ENSPCAG00000010276	SSB	99	54.948	Procavia_capensis
ENSPMEG00000001051	ssb	100	50.739	ENSPCOG00000023189	-	99	50.246	Propithecus_coquereli
ENSPMEG00000001051	ssb	100	55.172	ENSPCOG00000015741	-	92	66.379	Propithecus_coquereli
ENSPMEG00000001051	ssb	89	58.824	ENSPVAG00000006615	SSB	99	58.824	Pteropus_vampyrus
ENSPMEG00000001051	ssb	100	75.312	ENSPNYG00000006444	ssb	100	75.312	Pundamilia_nyererei
ENSPMEG00000001051	ssb	100	62.195	ENSPNAG00000011708	ssb	100	62.439	Pygocentrus_nattereri
ENSPMEG00000001051	ssb	100	51.559	ENSRNOG00000007998	Ssb	99	50.120	Rattus_norvegicus
ENSPMEG00000001051	ssb	100	52.228	ENSRNOG00000011606	AABR07061825.1	99	52.228	Rattus_norvegicus
ENSPMEG00000001051	ssb	98	41.457	ENSRBIG00000029918	-	96	41.206	Rhinopithecus_bieti
ENSPMEG00000001051	ssb	87	52.571	ENSRBIG00000041608	-	94	50.000	Rhinopithecus_bieti
ENSPMEG00000001051	ssb	100	49.268	ENSRBIG00000041972	SSB	88	67.826	Rhinopithecus_bieti
ENSPMEG00000001051	ssb	94	48.684	ENSRBIG00000041232	-	98	47.632	Rhinopithecus_bieti
ENSPMEG00000001051	ssb	98	48.615	ENSRROG00000031684	-	99	47.607	Rhinopithecus_roxellana
ENSPMEG00000001051	ssb	98	46.734	ENSRROG00000007149	-	97	46.482	Rhinopithecus_roxellana
ENSPMEG00000001051	ssb	87	54.857	ENSRROG00000034102	-	96	50.378	Rhinopithecus_roxellana
ENSPMEG00000001051	ssb	100	56.650	ENSRROG00000040346	SSB	99	56.404	Rhinopithecus_roxellana
ENSPMEG00000001051	ssb	100	56.650	ENSSBOG00000027204	SSB	99	56.404	Saimiri_boliviensis_boliviensis
ENSPMEG00000001051	ssb	100	56.404	ENSSHAG00000018062	SSB	99	56.404	Sarcophilus_harrisii
ENSPMEG00000001051	ssb	100	66.995	ENSSFOG00015000550	ssb	99	66.995	Scleropages_formosus
ENSPMEG00000001051	ssb	100	79.250	ENSSMAG00000013885	ssb	99	83.602	Scophthalmus_maximus
ENSPMEG00000001051	ssb	100	85.000	ENSSDUG00000020117	ssb	100	85.000	Seriola_dumerili
ENSPMEG00000001051	ssb	100	80.750	ENSSLDG00000002525	ssb	100	80.000	Seriola_lalandi_dorsalis
ENSPMEG00000001051	ssb	95	52.344	ENSSARG00000007747	SSB	99	52.344	Sorex_araneus
ENSPMEG00000001051	ssb	100	58.088	ENSSPUG00000012112	SSB	99	58.088	Sphenodon_punctatus
ENSPMEG00000001051	ssb	100	82.750	ENSSPAG00000005696	ssb	100	82.750	Stegastes_partitus
ENSPMEG00000001051	ssb	92	55.014	ENSSSCG00000015938	SSB	91	54.201	Sus_scrofa
ENSPMEG00000001051	ssb	93	57.487	ENSTGUG00000007942	SSB	99	56.235	Taeniopygia_guttata
ENSPMEG00000001051	ssb	100	76.750	ENSTRUG00000017839	ssb	100	80.000	Takifugu_rubripes
ENSPMEG00000001051	ssb	92	77.236	ENSTNIG00000000915	ssb	100	77.112	Tetraodon_nigroviridis
ENSPMEG00000001051	ssb	82	67.826	ENSTBEG00000009056	SSB	81	67.826	Tupaia_belangeri
ENSPMEG00000001051	ssb	100	57.740	ENSTTRG00000002152	SSB	99	56.511	Tursiops_truncatus
ENSPMEG00000001051	ssb	94	58.311	ENSUAMG00000027833	SSB	99	57.784	Ursus_americanus
ENSPMEG00000001051	ssb	100	57.002	ENSUMAG00000013907	SSB	99	56.511	Ursus_maritimus
ENSPMEG00000001051	ssb	100	57.072	ENSVPAG00000007183	SSB	99	56.576	Vicugna_pacos
ENSPMEG00000001051	ssb	100	57.248	ENSVVUG00000016573	SSB	77	56.757	Vulpes_vulpes
ENSPMEG00000001051	ssb	99	52.570	ENSXETG00000025402	ssb	99	52.336	Xenopus_tropicalis
ENSPMEG00000001051	ssb	94	91.247	ENSXCOG00000019109	ssb	99	91.005	Xiphophorus_couchianus
ENSPMEG00000001051	ssb	100	93.548	ENSXMAG00000004888	ssb	100	93.548	Xiphophorus_maculatus