EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSPMEG00000001182 (Gene tree)
Gene ID: 106922186
Gene Symbol: srrt
Alias: -
Full Name: serrate%2C RNA effector molecule
Gene Type: protein_coding
Species: Poecilia_mexicana
Status: putative
Strand: Plus strand
Length: 9359 bases
Position: chrKQ551524.1:252355-261713
Accession: 106922186
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSPMEP00000000410	ARS2	PF04959.13	1.4e-88	1	1
ENSPMEP00000000398	ARS2	PF04959.13	1.3e-86	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSPMET00000015949	-	2412	-	ENSPMEP00000000398	803 (aa)	-	-
ENSPMET00000015941	-	3054	XM_014994400	ENSPMEP00000000410	877 (aa)	XP_014849886	UPI00072EEE8B

Gene Model

Click here to download ENSPMEG00000001182's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSPMEG00000001182's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSPMEG00000001182	srrt	77	64.455	ENSPMEG00000001520	-	79	63.719

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSPMEG00000001182	srrt	85	74.514	ENSG00000087087	SRRT	98	85.484	Homo_sapiens
ENSPMEG00000001182	srrt	95	90.024	ENSAPOG00000002304	srrt	95	89.311	Acanthochromis_polyacanthus
ENSPMEG00000001182	srrt	96	65.438	ENSAMEG00000014506	SRRT	76	75.274	Ailuropoda_melanoleuca
ENSPMEG00000001182	srrt	95	83.528	ENSACIG00000015795	srrt	94	91.266	Amphilophus_citrinellus
ENSPMEG00000001182	srrt	93	56.429	ENSAOCG00000009189	-	75	66.883	Amphiprion_ocellaris
ENSPMEG00000001182	srrt	94	91.323	ENSAOCG00000009693	srrt	95	89.167	Amphiprion_ocellaris
ENSPMEG00000001182	srrt	93	56.429	ENSAPEG00000020016	-	75	66.883	Amphiprion_percula
ENSPMEG00000001182	srrt	95	89.405	ENSAPEG00000003646	srrt	95	88.690	Amphiprion_percula
ENSPMEG00000001182	srrt	59	64.375	ENSATEG00000003652	-	85	67.026	Anabas_testudineus
ENSPMEG00000001182	srrt	95	86.635	ENSATEG00000014425	srrt	95	86.874	Anabas_testudineus
ENSPMEG00000001182	srrt	95	65.998	ENSACAG00000001014	SRRT	95	65.279	Anolis_carolinensis
ENSPMEG00000001182	srrt	85	74.249	ENSANAG00000031718	SRRT	79	74.249	Aotus_nancymaae
ENSPMEG00000001182	srrt	93	57.057	ENSACLG00000009423	-	77	65.659	Astatotilapia_calliptera
ENSPMEG00000001182	srrt	95	86.770	ENSACLG00000013156	srrt	92	87.485	Astatotilapia_calliptera
ENSPMEG00000001182	srrt	82	86.385	ENSAMXG00000016671	srrt	74	86.256	Astyanax_mexicanus
ENSPMEG00000001182	srrt	96	63.605	ENSBTAG00000001134	SRRT	79	73.820	Bos_taurus
ENSPMEG00000001182	srrt	69	40.480	WBGene00017085	E01A2.2	85	42.194	Caenorhabditis_elegans
ENSPMEG00000001182	srrt	85	73.605	ENSCJAG00000014917	SRRT	79	74.034	Callithrix_jacchus
ENSPMEG00000001182	srrt	96	64.079	ENSCAFG00000023538	SRRT	79	73.820	Canis_familiaris
ENSPMEG00000001182	srrt	87	75.000	ENSCAFG00020013358	SRRT	79	74.082	Canis_lupus_dingo
ENSPMEG00000001182	srrt	88	74.138	ENSCHIG00000010495	SRRT	87	74.138	Capra_hircus
ENSPMEG00000001182	srrt	96	62.369	ENSTSYG00000036426	SRRT	82	74.298	Carlito_syrichta
ENSPMEG00000001182	srrt	84	74.836	ENSCAPG00000013586	SRRT	89	70.105	Cavia_aperea
ENSPMEG00000001182	srrt	96	63.573	ENSCPOG00000001739	SRRT	79	73.662	Cavia_porcellus
ENSPMEG00000001182	srrt	85	74.249	ENSCCAG00000015877	SRRT	79	74.249	Cebus_capucinus
ENSPMEG00000001182	srrt	85	74.298	ENSCATG00000036306	SRRT	79	74.298	Cercocebus_atys
ENSPMEG00000001182	srrt	96	63.488	ENSCLAG00000007568	SRRT	89	70.513	Chinchilla_lanigera
ENSPMEG00000001182	srrt	85	74.249	ENSCSAG00000017996	SRRT	79	74.249	Chlorocebus_sabaeus
ENSPMEG00000001182	srrt	51	74.074	ENSCHOG00000007815	SRRT	67	69.775	Choloepus_hoffmanni
ENSPMEG00000001182	srrt	95	51.204	ENSCPBG00000011553	SRRT	84	64.643	Chrysemys_picta_bellii
ENSPMEG00000001182	srrt	100	42.123	ENSCING00000003506	-	54	50.830	Ciona_intestinalis
ENSPMEG00000001182	srrt	100	42.936	ENSCSAVG00000008394	-	86	56.734	Ciona_savignyi
ENSPMEG00000001182	srrt	85	74.514	ENSCANG00000034556	SRRT	79	74.514	Colobus_angolensis_palliatus
ENSPMEG00000001182	srrt	96	64.352	ENSCGRG00001001594	Srrt	79	74.464	Cricetulus_griseus_chok1gshd
ENSPMEG00000001182	srrt	76	81.046	ENSCGRG00000007292	Srrt	87	73.932	Cricetulus_griseus_crigri
ENSPMEG00000001182	srrt	81	65.263	ENSCSEG00000005233	-	78	64.824	Cynoglossus_semilaevis
ENSPMEG00000001182	srrt	98	75.977	ENSCSEG00000017878	srrt	95	75.854	Cynoglossus_semilaevis
ENSPMEG00000001182	srrt	90	55.112	ENSCVAG00000017344	-	76	65.068	Cyprinodon_variegatus
ENSPMEG00000001182	srrt	95	91.418	ENSCVAG00000019848	srrt	95	92.014	Cyprinodon_variegatus
ENSPMEG00000001182	srrt	96	76.725	ENSDARG00000017762	srrt	95	77.086	Danio_rerio
ENSPMEG00000001182	srrt	85	74.249	ENSDNOG00000003851	SRRT	79	74.249	Dasypus_novemcinctus
ENSPMEG00000001182	srrt	96	65.076	ENSDORG00000005584	Srrt	89	71.552	Dipodomys_ordii
ENSPMEG00000001182	srrt	99	47.232	FBgn0033062	Ars2	77	52.754	Drosophila_melanogaster
ENSPMEG00000001182	srrt	81	71.519	ENSETEG00000016175	SRRT	71	72.078	Echinops_telfairi
ENSPMEG00000001182	srrt	76	52.201	ENSEBUG00000008517	-	77	62.473	Eptatretus_burgeri
ENSPMEG00000001182	srrt	96	64.120	ENSEASG00005016956	SRRT	79	74.249	Equus_asinus_asinus
ENSPMEG00000001182	srrt	96	64.120	ENSECAG00000012292	SRRT	79	74.249	Equus_caballus
ENSPMEG00000001182	srrt	81	77.083	ENSEEUG00000009117	SRRT	65	82.432	Erinaceus_europaeus
ENSPMEG00000001182	srrt	84	90.141	ENSELUG00000006651	srrt	73	90.047	Esox_lucius
ENSPMEG00000001182	srrt	93	58.175	ENSELUG00000021216	-	76	67.797	Esox_lucius
ENSPMEG00000001182	srrt	96	63.889	ENSFCAG00000006855	SRRT	79	74.249	Felis_catus
ENSPMEG00000001182	srrt	85	70.897	ENSFDAG00000021347	SRRT	88	68.874	Fukomys_damarensis
ENSPMEG00000001182	srrt	58	57.143	ENSFHEG00000004105	-	93	57.325	Fundulus_heteroclitus
ENSPMEG00000001182	srrt	79	95.370	ENSFHEG00000002756	srrt	90	95.635	Fundulus_heteroclitus
ENSPMEG00000001182	srrt	96	74.882	ENSGMOG00000018619	srrt	74	78.913	Gadus_morhua
ENSPMEG00000001182	srrt	70	66.143	ENSGMOG00000018694	-	84	60.521	Gadus_morhua
ENSPMEG00000001182	srrt	93	52.068	ENSGAFG00000020383	-	79	63.499	Gambusia_affinis
ENSPMEG00000001182	srrt	100	97.494	ENSGAFG00000005423	srrt	100	97.494	Gambusia_affinis
ENSPMEG00000001182	srrt	93	55.675	ENSGACG00000001100	-	74	65.500	Gasterosteus_aculeatus
ENSPMEG00000001182	srrt	95	86.128	ENSGACG00000020387	srrt	95	84.024	Gasterosteus_aculeatus
ENSPMEG00000001182	srrt	85	74.249	ENSGGOG00000001508	SRRT	79	74.514	Gorilla_gorilla
ENSPMEG00000001182	srrt	95	86.889	ENSHBUG00000002942	srrt	92	87.604	Haplochromis_burtoni
ENSPMEG00000001182	srrt	96	63.437	ENSHGLG00000008344	Srrt	89	70.299	Heterocephalus_glaber_female
ENSPMEG00000001182	srrt	96	63.805	ENSHGLG00100018857	Srrt	89	71.058	Heterocephalus_glaber_male
ENSPMEG00000001182	srrt	93	54.523	ENSHCOG00000008904	-	89	63.436	Hippocampus_comes
ENSPMEG00000001182	srrt	98	81.352	ENSHCOG00000005403	srrt	95	80.884	Hippocampus_comes
ENSPMEG00000001182	srrt	93	74.427	ENSIPUG00000021150	srrt	95	74.178	Ictalurus_punctatus
ENSPMEG00000001182	srrt	96	64.055	ENSSTOG00000013776	SRRT	79	74.514	Ictidomys_tridecemlineatus
ENSPMEG00000001182	srrt	96	64.947	ENSJJAG00000010446	Srrt	89	71.490	Jaculus_jaculus
ENSPMEG00000001182	srrt	95	86.477	ENSKMAG00000013599	srrt	95	86.595	Kryptolebias_marmoratus
ENSPMEG00000001182	srrt	82	64.375	ENSKMAG00000008468	-	77	64.706	Kryptolebias_marmoratus
ENSPMEG00000001182	srrt	86	94.828	ENSLBEG00000016308	srrt	79	94.787	Labrus_bergylta
ENSPMEG00000001182	srrt	53	65.347	ENSLBEG00000028983	-	78	64.828	Labrus_bergylta
ENSPMEG00000001182	srrt	84	77.830	ENSLACG00000001089	SRRT	79	79.245	Latimeria_chalumnae
ENSPMEG00000001182	srrt	91	55.650	ENSLOCG00000013658	srrt	76	82.650	Lepisosteus_oculatus
ENSPMEG00000001182	srrt	96	64.236	ENSLAFG00000007725	SRRT	79	74.464	Loxodonta_africana
ENSPMEG00000001182	srrt	85	74.514	ENSMFAG00000033745	SRRT	82	72.785	Macaca_fascicularis
ENSPMEG00000001182	srrt	85	74.249	ENSMMUG00000021255	SRRT	79	74.249	Macaca_mulatta
ENSPMEG00000001182	srrt	85	74.249	ENSMNEG00000041864	SRRT	79	74.249	Macaca_nemestrina
ENSPMEG00000001182	srrt	85	74.514	ENSMLEG00000029479	SRRT	81	72.785	Mandrillus_leucophaeus
ENSPMEG00000001182	srrt	93	57.299	ENSMAMG00000010681	-	75	67.672	Mastacembelus_armatus
ENSPMEG00000001182	srrt	95	87.470	ENSMAMG00000014311	srrt	95	86.874	Mastacembelus_armatus
ENSPMEG00000001182	srrt	93	57.177	ENSMZEG00005028002	-	94	52.506	Maylandia_zebra
ENSPMEG00000001182	srrt	95	86.889	ENSMZEG00005016135	srrt	92	87.604	Maylandia_zebra
ENSPMEG00000001182	srrt	85	73.820	ENSMAUG00000011386	Srrt	89	70.488	Mesocricetus_auratus
ENSPMEG00000001182	srrt	85	74.464	ENSMICG00000009471	SRRT	81	72.996	Microcebus_murinus
ENSPMEG00000001182	srrt	96	64.624	ENSMOCG00000001971	Srrt	89	71.459	Microtus_ochrogaster
ENSPMEG00000001182	srrt	95	80.714	ENSMMOG00000016399	srrt	80	96.209	Mola_mola
ENSPMEG00000001182	srrt	83	56.836	ENSMMOG00000011137	-	81	66.452	Mola_mola
ENSPMEG00000001182	srrt	57	71.429	ENSMODG00000004862	SRRT	89	71.642	Monodelphis_domestica
ENSPMEG00000001182	srrt	90	80.524	ENSMALG00000018604	srrt	99	77.485	Monopterus_albus
ENSPMEG00000001182	srrt	60	50.200	ENSMALG00000005567	-	84	54.185	Monopterus_albus
ENSPMEG00000001182	srrt	96	65.457	MGP_CAROLIEiJ_G0027870	Srrt	99	72.119	Mus_caroli
ENSPMEG00000001182	srrt	96	65.457	ENSMUSG00000037364	Srrt	99	72.119	Mus_musculus
ENSPMEG00000001182	srrt	96	65.529	MGP_PahariEiJ_G0024456	Srrt	99	72.119	Mus_pahari
ENSPMEG00000001182	srrt	96	65.457	MGP_SPRETEiJ_G0028875	Srrt	99	72.119	Mus_spretus
ENSPMEG00000001182	srrt	96	64.468	ENSMPUG00000015839	SRRT	79	74.249	Mustela_putorius_furo
ENSPMEG00000001182	srrt	85	74.034	ENSMLUG00000009975	SRRT	79	74.034	Myotis_lucifugus
ENSPMEG00000001182	srrt	96	64.774	ENSNGAG00000023715	Srrt	80	74.249	Nannospalax_galili
ENSPMEG00000001182	srrt	98	85.482	ENSNBRG00000019100	srrt	95	85.800	Neolamprologus_brichardi
ENSPMEG00000001182	srrt	83	69.231	ENSNLEG00000011987	SRRT	81	68.396	Nomascus_leucogenys
ENSPMEG00000001182	srrt	96	54.302	ENSMEUG00000011941	SRRT	75	61.290	Notamacropus_eugenii
ENSPMEG00000001182	srrt	67	73.485	ENSOPRG00000002502	-	67	75.000	Ochotona_princeps
ENSPMEG00000001182	srrt	85	75.055	ENSODEG00000016856	SRRT	89	71.274	Octodon_degus
ENSPMEG00000001182	srrt	95	85.357	ENSONIG00000004242	srrt	95	82.715	Oreochromis_niloticus
ENSPMEG00000001182	srrt	93	57.601	ENSONIG00000016080	-	75	67.238	Oreochromis_niloticus
ENSPMEG00000001182	srrt	98	84.750	ENSORLG00000008120	srrt	95	84.368	Oryzias_latipes
ENSPMEG00000001182	srrt	98	84.517	ENSORLG00020003058	srrt	95	84.129	Oryzias_latipes_hni
ENSPMEG00000001182	srrt	98	84.400	ENSORLG00015008062	srrt	95	84.010	Oryzias_latipes_hsok
ENSPMEG00000001182	srrt	98	85.797	ENSOMEG00000003155	srrt	95	85.084	Oryzias_melastigma
ENSPMEG00000001182	srrt	93	59.295	ENSOMEG00000006963	-	78	66.739	Oryzias_melastigma
ENSPMEG00000001182	srrt	85	74.249	ENSOGAG00000017242	SRRT	79	74.249	Otolemur_garnettii
ENSPMEG00000001182	srrt	85	74.082	ENSOARG00000015645	SRRT	79	74.082	Ovis_aries
ENSPMEG00000001182	srrt	85	74.514	ENSPPAG00000041090	SRRT	79	74.514	Pan_paniscus
ENSPMEG00000001182	srrt	96	63.879	ENSPPRG00000009557	SRRT	79	74.298	Panthera_pardus
ENSPMEG00000001182	srrt	96	64.005	ENSPTIG00000014355	SRRT	79	74.249	Panthera_tigris_altaica
ENSPMEG00000001182	srrt	85	74.514	ENSPTRG00000019511	SRRT	79	74.514	Pan_troglodytes
ENSPMEG00000001182	srrt	84	72.785	ENSPANG00000020763	SRRT	80	72.785	Papio_anubis
ENSPMEG00000001182	srrt	98	73.212	ENSPKIG00000005434	srrt	95	73.333	Paramormyrops_kingsleyae
ENSPMEG00000001182	srrt	94	71.034	ENSPKIG00000022212	-	77	79.521	Paramormyrops_kingsleyae
ENSPMEG00000001182	srrt	95	66.429	ENSPSIG00000016311	SRRT	85	75.546	Pelodiscus_sinensis
ENSPMEG00000001182	srrt	98	76.674	ENSPMGG00000002841	srrt	56	86.667	Periophthalmus_magnuspinnatus
ENSPMEG00000001182	srrt	96	65.105	ENSPEMG00000010834	Srrt	89	71.274	Peromyscus_maniculatus_bairdii
ENSPMEG00000001182	srrt	96	54.042	ENSPMAG00000009614	-	79	63.080	Petromyzon_marinus
ENSPMEG00000001182	srrt	96	63.912	ENSPCIG00000000816	SRRT	77	72.650	Phascolarctos_cinereus
ENSPMEG00000001182	srrt	100	99.544	ENSPFOG00000005704	srrt	100	99.544	Poecilia_formosa
ENSPMEG00000001182	srrt	82	64.224	ENSPFOG00000016554	-	80	64.440	Poecilia_formosa
ENSPMEG00000001182	srrt	98	99.603	ENSPLAG00000021992	srrt	100	97.407	Poecilia_latipinna
ENSPMEG00000001182	srrt	82	63.871	ENSPLAG00000004526	-	80	64.086	Poecilia_latipinna
ENSPMEG00000001182	srrt	100	98.519	ENSPREG00000022308	srrt	100	98.519	Poecilia_reticulata
ENSPMEG00000001182	srrt	85	70.742	ENSPPYG00000017432	SRRT	77	69.912	Pongo_abelii
ENSPMEG00000001182	srrt	85	72.363	ENSPCAG00000001621	SRRT	79	72.363	Procavia_capensis
ENSPMEG00000001182	srrt	85	74.514	ENSPCOG00000025751	SRRT	79	74.514	Propithecus_coquereli
ENSPMEG00000001182	srrt	68	66.094	ENSPVAG00000000834	SRRT	90	66.094	Pteropus_vampyrus
ENSPMEG00000001182	srrt	95	86.770	ENSPNYG00000018710	srrt	95	87.485	Pundamilia_nyererei
ENSPMEG00000001182	srrt	78	89.241	ENSPNAG00000010629	srrt	69	89.103	Pygocentrus_nattereri
ENSPMEG00000001182	srrt	57	64.348	ENSRNOG00000048277	AABR07035787.1	92	64.706	Rattus_norvegicus
ENSPMEG00000001182	srrt	85	74.249	ENSRBIG00000035718	SRRT	79	74.249	Rhinopithecus_bieti
ENSPMEG00000001182	srrt	85	74.249	ENSRROG00000030622	SRRT	81	72.785	Rhinopithecus_roxellana
ENSPMEG00000001182	srrt	85	74.249	ENSSBOG00000033570	SRRT	80	74.514	Saimiri_boliviensis_boliviensis
ENSPMEG00000001182	srrt	72	60.648	ENSSHAG00000007349	-	74	72.128	Sarcophilus_harrisii
ENSPMEG00000001182	srrt	94	76.219	ENSSFOG00015017293	srrt	95	76.471	Scleropages_formosus
ENSPMEG00000001182	srrt	95	87.947	ENSSMAG00000015342	srrt	95	91.247	Scophthalmus_maximus
ENSPMEG00000001182	srrt	57	64.363	ENSSMAG00000018195	-	81	64.163	Scophthalmus_maximus
ENSPMEG00000001182	srrt	95	90.334	ENSSDUG00000012049	srrt	91	90.334	Seriola_dumerili
ENSPMEG00000001182	srrt	57	55.789	ENSSDUG00000002051	-	93	56.867	Seriola_dumerili
ENSPMEG00000001182	srrt	95	80.075	ENSSLDG00000017477	srrt	87	91.912	Seriola_lalandi_dorsalis
ENSPMEG00000001182	srrt	74	65.854	ENSSPAG00000018943	-	93	58.134	Stegastes_partitus
ENSPMEG00000001182	srrt	95	88.849	ENSSPAG00000005665	srrt	94	88.138	Stegastes_partitus
ENSPMEG00000001182	srrt	81	73.198	ENSSSCG00000024789	SRRT	80	73.198	Sus_scrofa
ENSPMEG00000001182	srrt	89	54.224	ENSTRUG00000000023	-	76	62.187	Takifugu_rubripes
ENSPMEG00000001182	srrt	98	81.850	ENSTRUG00000016075	srrt	95	82.227	Takifugu_rubripes
ENSPMEG00000001182	srrt	74	76.162	ENSTNIG00000011779	srrt	77	92.000	Tetraodon_nigroviridis
ENSPMEG00000001182	srrt	93	54.182	ENSTNIG00000003111	-	77	63.441	Tetraodon_nigroviridis
ENSPMEG00000001182	srrt	64	77.401	ENSTBEG00000005212	SRRT	57	77.401	Tupaia_belangeri
ENSPMEG00000001182	srrt	89	74.034	ENSTTRG00000011104	SRRT	79	74.034	Tursiops_truncatus
ENSPMEG00000001182	srrt	96	63.763	ENSUAMG00000027997	SRRT	81	74.249	Ursus_americanus
ENSPMEG00000001182	srrt	96	63.889	ENSUMAG00000011295	SRRT	79	74.249	Ursus_maritimus
ENSPMEG00000001182	srrt	96	64.079	ENSVVUG00000023572	SRRT	79	73.820	Vulpes_vulpes
ENSPMEG00000001182	srrt	79	76.404	ENSXETG00000025124	srrt	93	67.660	Xenopus_tropicalis
ENSPMEG00000001182	srrt	59	51.992	ENSXCOG00000013105	-	91	53.796	Xiphophorus_couchianus
ENSPMEG00000001182	srrt	82	63.636	ENSXMAG00000002090	-	79	65.011	Xiphophorus_maculatus
ENSPMEG00000001182	srrt	100	97.494	ENSXMAG00000007627	srrt	100	97.494	Xiphophorus_maculatus