EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSPMEG00000001224 (Gene tree)
Gene ID: 106921138
Gene Symbol: larp1b
Alias: -
Full Name: la-related protein 1B-like
Gene Type: protein_coding
Species: Poecilia_mexicana
Status: putative
Strand: Plus strand
Length: 37781 bases
Position: chrKQ551452.1:286111-323891
Accession: 106921138
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSPMEP00000000445	La	PF05383.17	2.1e-21	1	1
ENSPMEP00000021184	La	PF05383.17	2.2e-21	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSPMET00000015877	-	4747	XM_014992625	ENSPMEP00000000445	1027 (aa)	XP_014848111	-
ENSPMET00000015874	-	4921	XM_014992620	ENSPMEP00000021184	1085 (aa)	XP_014848106	UPI00072D9957

Gene Model

Click here to download ENSPMEG00000001224's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSPMEG00000001224's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSPMEG00000001224	larp1b	91	53.049	ENSPMEG00000013656	larp1	100	49.246

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSPMEG00000001224	larp1b	86	55.295	ENSG00000138709	LARP1B	97	56.818	Homo_sapiens
ENSPMEG00000001224	larp1b	100	81.635	ENSAPOG00000020101	larp1b	100	81.635	Acanthochromis_polyacanthus
ENSPMEG00000001224	larp1b	52	53.380	ENSAMEG00000002748	LARP1B	99	53.553	Ailuropoda_melanoleuca
ENSPMEG00000001224	larp1b	100	77.820	ENSACIG00000023890	larp1b	100	77.820	Amphilophus_citrinellus
ENSPMEG00000001224	larp1b	90	77.979	ENSAOCG00000014268	larp1b	99	78.062	Amphiprion_ocellaris
ENSPMEG00000001224	larp1b	100	81.442	ENSAPEG00000004126	larp1b	100	81.635	Amphiprion_percula
ENSPMEG00000001224	larp1b	100	79.693	ENSATEG00000017849	larp1b	100	79.580	Anabas_testudineus
ENSPMEG00000001224	larp1b	82	55.857	ENSAPLG00000010129	LARP1B	100	55.054	Anas_platyrhynchos
ENSPMEG00000001224	larp1b	84	56.448	ENSACAG00000011338	LARP1B	99	54.627	Anolis_carolinensis
ENSPMEG00000001224	larp1b	68	51.138	ENSANAG00000034618	LARP1B	96	49.359	Aotus_nancymaae
ENSPMEG00000001224	larp1b	100	79.144	ENSACLG00000011948	larp1b	100	79.326	Astatotilapia_calliptera
ENSPMEG00000001224	larp1b	87	61.075	ENSAMXG00000006805	larp1b	92	60.606	Astyanax_mexicanus
ENSPMEG00000001224	larp1b	86	57.492	ENSBTAG00000012135	LARP1B	95	52.345	Bos_taurus
ENSPMEG00000001224	larp1b	82	56.659	ENSCJAG00000003338	LARP1B	99	57.569	Callithrix_jacchus
ENSPMEG00000001224	larp1b	86	57.321	ENSCAFG00000003831	LARP1B	99	60.844	Canis_familiaris
ENSPMEG00000001224	larp1b	86	56.995	ENSCAFG00020018899	LARP1B	99	57.656	Canis_lupus_dingo
ENSPMEG00000001224	larp1b	85	56.485	ENSCHIG00000023144	LARP1B	99	56.067	Capra_hircus
ENSPMEG00000001224	larp1b	82	56.573	ENSCCAG00000021948	LARP1B	97	56.789	Cebus_capucinus
ENSPMEG00000001224	larp1b	81	56.013	ENSCATG00000013541	LARP1B	97	56.230	Cercocebus_atys
ENSPMEG00000001224	larp1b	81	56.803	ENSCSAG00000003582	LARP1B	97	57.127	Chlorocebus_sabaeus
ENSPMEG00000001224	larp1b	80	54.535	ENSCHOG00000005354	LARP1B	97	54.646	Choloepus_hoffmanni
ENSPMEG00000001224	larp1b	87	56.545	ENSCPBG00000017480	LARP1B	92	55.487	Chrysemys_picta_bellii
ENSPMEG00000001224	larp1b	80	57.714	ENSCANG00000026958	LARP1B	97	57.943	Colobus_angolensis_palliatus
ENSPMEG00000001224	larp1b	100	73.429	ENSCSEG00000013519	larp1b	100	73.968	Cynoglossus_semilaevis
ENSPMEG00000001224	larp1b	100	86.588	ENSCVAG00000005046	larp1b	100	86.131	Cyprinodon_variegatus
ENSPMEG00000001224	larp1b	99	62.300	ENSDARG00000061169	larp1b	96	62.488	Danio_rerio
ENSPMEG00000001224	larp1b	72	55.904	ENSETEG00000012497	LARP1B	85	55.904	Echinops_telfairi
ENSPMEG00000001224	larp1b	84	46.054	ENSEBUG00000003668	larp1b	93	45.683	Eptatretus_burgeri
ENSPMEG00000001224	larp1b	85	56.649	ENSEASG00005018106	LARP1B	100	56.128	Equus_asinus_asinus
ENSPMEG00000001224	larp1b	89	56.366	ENSECAG00000001088	LARP1B	88	55.523	Equus_caballus
ENSPMEG00000001224	larp1b	88	53.105	ENSELUG00000023774	larp1b	93	64.741	Esox_lucius
ENSPMEG00000001224	larp1b	84	54.280	ENSFALG00000008098	LARP1B	99	53.433	Ficedula_albicollis
ENSPMEG00000001224	larp1b	100	88.835	ENSFHEG00000010264	larp1b	97	88.354	Fundulus_heteroclitus
ENSPMEG00000001224	larp1b	85	76.384	ENSGMOG00000005207	larp1b	85	76.753	Gadus_morhua
ENSPMEG00000001224	larp1b	90	54.059	ENSGALG00000010207	LARP1B	95	53.202	Gallus_gallus
ENSPMEG00000001224	larp1b	89	92.523	ENSGAFG00000012012	larp1b	100	95.320	Gambusia_affinis
ENSPMEG00000001224	larp1b	100	68.407	ENSGACG00000004609	larp1b	100	69.319	Gasterosteus_aculeatus
ENSPMEG00000001224	larp1b	87	57.442	ENSGAGG00000017209	LARP1B	89	57.233	Gopherus_agassizii
ENSPMEG00000001224	larp1b	81	56.602	ENSGGOG00000015900	LARP1B	97	56.818	Gorilla_gorilla
ENSPMEG00000001224	larp1b	100	79.885	ENSHBUG00000009730	larp1b	100	80.077	Haplochromis_burtoni
ENSPMEG00000001224	larp1b	65	82.111	ENSHCOG00000000918	larp1b	96	81.912	Hippocampus_comes
ENSPMEG00000001224	larp1b	93	68.514	ENSIPUG00000012138	larp1b	98	66.626	Ictalurus_punctatus
ENSPMEG00000001224	larp1b	96	81.656	ENSKMAG00000011589	larp1b	99	80.127	Kryptolebias_marmoratus
ENSPMEG00000001224	larp1b	100	79.119	ENSLBEG00000005655	larp1b	100	79.119	Labrus_bergylta
ENSPMEG00000001224	larp1b	89	59.615	ENSLACG00000015247	LARP1B	91	59.095	Latimeria_chalumnae
ENSPMEG00000001224	larp1b	89	59.883	ENSLOCG00000010684	larp1b	99	59.154	Lepisosteus_oculatus
ENSPMEG00000001224	larp1b	81	56.988	ENSMFAG00000002218	LARP1B	97	57.313	Macaca_fascicularis
ENSPMEG00000001224	larp1b	81	57.096	ENSMMUG00000021347	LARP1B	97	57.313	Macaca_mulatta
ENSPMEG00000001224	larp1b	80	54.355	ENSMNEG00000030406	LARP1B	97	54.588	Macaca_nemestrina
ENSPMEG00000001224	larp1b	80	57.191	ENSMLEG00000009306	LARP1B	97	57.692	Mandrillus_leucophaeus
ENSPMEG00000001224	larp1b	98	81.693	ENSMAMG00000000081	larp1b	98	81.398	Mastacembelus_armatus
ENSPMEG00000001224	larp1b	75	81.772	ENSMZEG00005002545	larp1b	100	82.028	Maylandia_zebra
ENSPMEG00000001224	larp1b	76	56.815	ENSMGAG00000004809	LARP1B	100	51.404	Meleagris_gallopavo
ENSPMEG00000001224	larp1b	84	58.298	ENSMICG00000036111	LARP1B	100	58.511	Microcebus_murinus
ENSPMEG00000001224	larp1b	89	55.024	ENSMODG00000012300	LARP1B	90	54.606	Monodelphis_domestica
ENSPMEG00000001224	larp1b	100	79.981	ENSMALG00000003638	larp1b	100	82.893	Monopterus_albus
ENSPMEG00000001224	larp1b	86	57.840	ENSMPUG00000017365	LARP1B	88	56.398	Mustela_putorius_furo
ENSPMEG00000001224	larp1b	83	56.250	ENSMLUG00000010229	LARP1B	99	55.826	Myotis_lucifugus
ENSPMEG00000001224	larp1b	92	76.806	ENSNBRG00000023846	larp1b	100	76.709	Neolamprologus_brichardi
ENSPMEG00000001224	larp1b	81	56.371	ENSNLEG00000013819	LARP1B	97	56.587	Nomascus_leucogenys
ENSPMEG00000001224	larp1b	62	60.597	ENSMEUG00000010308	LARP1B	74	60.149	Notamacropus_eugenii
ENSPMEG00000001224	larp1b	77	51.460	ENSOPRG00000005478	LARP1B	92	51.620	Ochotona_princeps
ENSPMEG00000001224	larp1b	87	79.532	ENSONIG00000012386	larp1b	100	79.001	Oreochromis_niloticus
ENSPMEG00000001224	larp1b	84	55.403	ENSOCUG00000013330	LARP1B	99	55.720	Oryctolagus_cuniculus
ENSPMEG00000001224	larp1b	98	77.372	ENSORLG00000017954	larp1b	100	76.369	Oryzias_latipes
ENSPMEG00000001224	larp1b	99	75.763	ENSORLG00020013081	larp1b	100	75.159	Oryzias_latipes_hni
ENSPMEG00000001224	larp1b	98	77.701	ENSORLG00015009580	larp1b	100	76.561	Oryzias_latipes_hsok
ENSPMEG00000001224	larp1b	98	79.980	ENSOMEG00000004210	larp1b	100	78.730	Oryzias_melastigma
ENSPMEG00000001224	larp1b	82	58.746	ENSOGAG00000005771	LARP1B	100	58.306	Otolemur_garnettii
ENSPMEG00000001224	larp1b	81	57.484	ENSOARG00000015300	LARP1B	97	57.050	Ovis_aries
ENSPMEG00000001224	larp1b	81	56.710	ENSPPAG00000030439	LARP1B	97	56.926	Pan_paniscus
ENSPMEG00000001224	larp1b	81	56.710	ENSPTRG00000016437	LARP1B	97	56.926	Pan_troglodytes
ENSPMEG00000001224	larp1b	81	56.988	ENSPANG00000012488	LARP1B	97	57.313	Papio_anubis
ENSPMEG00000001224	larp1b	88	55.076	ENSPKIG00000014360	larp1b	97	55.087	Paramormyrops_kingsleyae
ENSPMEG00000001224	larp1b	86	57.780	ENSPSIG00000012885	LARP1B	99	57.923	Pelodiscus_sinensis
ENSPMEG00000001224	larp1b	77	72.996	ENSPMGG00000007207	larp1b	96	73.559	Periophthalmus_magnuspinnatus
ENSPMEG00000001224	larp1b	64	57.504	ENSPMAG00000002700	larp1b	99	49.384	Petromyzon_marinus
ENSPMEG00000001224	larp1b	87	57.201	ENSPCIG00000026516	LARP1B	99	62.549	Phascolarctos_cinereus
ENSPMEG00000001224	larp1b	63	98.834	ENSPFOG00000022837	-	99	98.834	Poecilia_formosa
ENSPMEG00000001224	larp1b	100	97.027	ENSPFOG00000019519	larp1b	100	97.027	Poecilia_formosa
ENSPMEG00000001224	larp1b	100	98.433	ENSPLAG00000007115	larp1b	100	98.433	Poecilia_latipinna
ENSPMEG00000001224	larp1b	84	54.832	ENSPCAG00000007546	LARP1B	99	55.042	Procavia_capensis
ENSPMEG00000001224	larp1b	71	68.293	ENSPCOG00000021874	LARP1B	97	68.293	Propithecus_coquereli
ENSPMEG00000001224	larp1b	84	53.483	ENSPVAG00000005373	LARP1B	100	53.591	Pteropus_vampyrus
ENSPMEG00000001224	larp1b	75	81.290	ENSPNYG00000017357	larp1b	100	81.290	Pundamilia_nyererei
ENSPMEG00000001224	larp1b	99	59.390	ENSPNAG00000008823	larp1b	95	61.501	Pygocentrus_nattereri
ENSPMEG00000001224	larp1b	81	56.988	ENSRROG00000030771	LARP1B	97	57.313	Rhinopithecus_roxellana
ENSPMEG00000001224	larp1b	61	52.774	ENSSHAG00000014474	LARP1B	99	53.219	Sarcophilus_harrisii
ENSPMEG00000001224	larp1b	85	81.034	ENSSMAG00000006347	larp1b	99	78.002	Scophthalmus_maximus
ENSPMEG00000001224	larp1b	95	84.318	ENSSDUG00000004182	larp1b	100	81.226	Seriola_dumerili
ENSPMEG00000001224	larp1b	98	75.446	ENSSLDG00000014613	larp1b	99	78.838	Seriola_lalandi_dorsalis
ENSPMEG00000001224	larp1b	81	57.336	ENSSPUG00000011837	LARP1B	98	57.062	Sphenodon_punctatus
ENSPMEG00000001224	larp1b	96	83.239	ENSSPAG00000017772	larp1b	100	81.391	Stegastes_partitus
ENSPMEG00000001224	larp1b	86	55.673	ENSSSCG00000034280	LARP1B	98	80.460	Sus_scrofa
ENSPMEG00000001224	larp1b	70	60.912	ENSTGUG00000002098	-	86	60.912	Taeniopygia_guttata
ENSPMEG00000001224	larp1b	99	75.147	ENSTRUG00000005612	larp1b	99	73.386	Takifugu_rubripes
ENSPMEG00000001224	larp1b	89	76.464	ENSTNIG00000012398	larp1b	99	75.708	Tetraodon_nigroviridis
ENSPMEG00000001224	larp1b	57	61.837	ENSTBEG00000004177	LARP1B	69	61.837	Tupaia_belangeri
ENSPMEG00000001224	larp1b	73	59.363	ENSTTRG00000012984	LARP1B	89	58.072	Tursiops_truncatus
ENSPMEG00000001224	larp1b	86	57.292	ENSUMAG00000007373	LARP1B	100	57.396	Ursus_maritimus
ENSPMEG00000001224	larp1b	81	49.125	ENSVPAG00000007223	LARP1B	91	73.494	Vicugna_pacos
ENSPMEG00000001224	larp1b	86	57.321	ENSVVUG00000011307	LARP1B	100	57.321	Vulpes_vulpes
ENSPMEG00000001224	larp1b	88	53.138	ENSXETG00000022512	larp1b	93	53.271	Xenopus_tropicalis
ENSPMEG00000001224	larp1b	88	95.238	ENSXCOG00000004435	larp1b	96	95.238	Xiphophorus_couchianus
ENSPMEG00000001224	larp1b	100	95.967	ENSXMAG00000008150	larp1b	100	95.967	Xiphophorus_maculatus