EuRBPDB

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  • Description
  • RBDs
  • Transcripts
  • Gene Model
  • PPI
  • Paralogs
  • Orthologs
Description
Ensembl ID
ENSPMEG00000001334 (Gene tree)
Gene ID
106907586
Gene Symbol
pabpc1a
Alias
-
Full Name
poly(A) binding protein cytoplasmic 1
Gene Type
protein_coding
Species
Poecilia_mexicana
Status
putative
Strand
Plus strand
Length
7569 bases
Position
chrKQ553582.1:27566-35134
Accession
106907586
RBP type
canonical RBP
Summary
-
RNA binding domains(RBDs)
Protein IDDomain Pfam IDE-value Domain number Total number
ENSPMEP00000000546PABPPF00658.186.5e-3211
ENSPMEP00000000546RRM_5PF13893.63.6e-0812
ENSPMEP00000000546RRM_5PF13893.63.6e-0822
ENSPMEP00000000546RRM_1PF00076.224.5e-9314
ENSPMEP00000000546RRM_1PF00076.224.5e-9324
ENSPMEP00000000546RRM_1PF00076.224.5e-9334
ENSPMEP00000000546RRM_1PF00076.224.5e-9344
Transcripts
Transcript IDNameLengthRefSeq ID Protein IDLengthRefSeq IDUniportKB ID
ENSPMET00000015707-3471XM_014973381ENSPMEP00000000546635 (aa)XP_014828867UPI000443A215
Gene Model
Click here to download ENSPMEG00000001334's gene model file
Protein-Protein Interaction (PPI)

Clik here to download ENSPMEG00000001334's network
Paralogs
Ensembl IDGene SymbolCoverageIdentiy ParalogGene SymbolCoverageIdentiy
ENSPMEG00000001334pabpc1a5736.047ENSPMEG00000013036-5736.047
ENSPMEG00000001334pabpc1a10088.871ENSPMEG00000014399pabpc1b10089.969
ENSPMEG00000001334pabpc1a5937.349ENSPMEG00000021929ELAVL28531.579
ENSPMEG00000001334pabpc1a9876.592ENSPMEG00000019739pabpc49877.266
ENSPMEG00000001334pabpc1a9870.253ENSPMEG00000007677pabpc1l9970.253
ENSPMEG00000001334pabpc1a5936.145ENSPMEG00000015619elavl47836.145
ENSPMEG00000001334pabpc1a5189.231ENSPMEG00000009185-8889.231
ENSPMEG00000001334pabpc1a5638.667ENSPMEG00000018585rbm197438.667
ENSPMEG00000001334pabpc1a5730.328ENSPMEG00000013469tia1l8630.328
ENSPMEG00000001334pabpc1a5830.389ENSPMEG00000006938tial19035.036
Orthologs
Ensembl IDGene SymbolCoverageIdentiy OrthologGene SymbolCoverageIdentiy Species
ENSPMEG00000001334pabpc1a5880.102ENSG00000184388PABPC1L2B9880.102Homo_sapiens
ENSPMEG00000001334pabpc1a5880.102ENSG00000186288PABPC1L2A9880.102Homo_sapiens
ENSPMEG00000001334pabpc1a10098.583ENSAPOG00000015105pabpc1a10098.583Acanthochromis_polyacanthus
ENSPMEG00000001334pabpc1a10090.752ENSAPOG00000017776pabpc1b10090.439Acanthochromis_polyacanthus
ENSPMEG00000001334pabpc1a5880.102ENSAMEG00000019441-9880.102Ailuropoda_melanoleuca
ENSPMEG00000001334pabpc1a10098.425ENSACIG00000004685pabpc1a10098.425Amphilophus_citrinellus
ENSPMEG00000001334pabpc1a10086.228ENSACIG00000018366pabpc1b10086.115Amphilophus_citrinellus
ENSPMEG00000001334pabpc1a10090.596ENSAOCG00000019839pabpc1b10090.282Amphiprion_ocellaris
ENSPMEG00000001334pabpc1a10099.055ENSAOCG00000011656pabpc1a10099.055Amphiprion_ocellaris
ENSPMEG00000001334pabpc1a10090.596ENSAPEG00000010435pabpc1b10090.282Amphiprion_percula
ENSPMEG00000001334pabpc1a10099.055ENSAPEG00000006963pabpc1a10099.055Amphiprion_percula
ENSPMEG00000001334pabpc1a10089.515ENSATEG00000012917pabpc1b10089.515Anabas_testudineus
ENSPMEG00000001334pabpc1a10098.425ENSATEG00000024852pabpc1a10098.425Anabas_testudineus
ENSPMEG00000001334pabpc1a5880.102ENSANAG00000019431-9880.102Aotus_nancymaae
ENSPMEG00000001334pabpc1a5880.102ENSANAG00000019429-9880.102Aotus_nancymaae
ENSPMEG00000001334pabpc1a10098.110ENSACLG00000009399pabpc1a10098.110Astatotilapia_calliptera
ENSPMEG00000001334pabpc1a10089.342ENSACLG00000014335pabpc1b10089.185Astatotilapia_calliptera
ENSPMEG00000001334pabpc1a10090.596ENSAMXG00000008599pabpc1b10090.439Astyanax_mexicanus
ENSPMEG00000001334pabpc1a5979.024ENSBTAG00000050902-9879.024Bos_taurus
ENSPMEG00000001334pabpc1a5977.033ENSBTAG00000052491-9877.033Bos_taurus
ENSPMEG00000001334pabpc1a5880.102ENSCJAG00000041326-9880.102Callithrix_jacchus
ENSPMEG00000001334pabpc1a5979.024ENSCAFG00020002052-9879.024Canis_lupus_dingo
ENSPMEG00000001334pabpc1a5880.102ENSCHIG00000006283-9880.102Capra_hircus
ENSPMEG00000001334pabpc1a5880.102ENSCHIG00000011138-9880.102Capra_hircus
ENSPMEG00000001334pabpc1a5880.102ENSTSYG00000001775-9880.102Carlito_syrichta
ENSPMEG00000001334pabpc1a5880.102ENSCPOG00000009525-9880.102Cavia_porcellus
ENSPMEG00000001334pabpc1a5880.102ENSCCAG00000031524-9880.102Cebus_capucinus
ENSPMEG00000001334pabpc1a5880.102ENSCATG00000042826-9880.102Cercocebus_atys
ENSPMEG00000001334pabpc1a5880.102ENSCATG00000043125-9880.102Cercocebus_atys
ENSPMEG00000001334pabpc1a5878.061ENSCLAG00000017412-9878.061Chinchilla_lanigera
ENSPMEG00000001334pabpc1a5878.061ENSCLAG00000017409-9878.061Chinchilla_lanigera
ENSPMEG00000001334pabpc1a5880.102ENSCSAG00000000102-9880.102Chlorocebus_sabaeus
ENSPMEG00000001334pabpc1a5780.110ENSCGRG00001023387-9677.436Cricetulus_griseus_chok1gshd
ENSPMEG00000001334pabpc1a9997.943ENSCSEG00000013324pabpc1a10097.943Cynoglossus_semilaevis
ENSPMEG00000001334pabpc1a10088.871ENSCSEG00000015241-10088.871Cynoglossus_semilaevis
ENSPMEG00000001334pabpc1a10088.106ENSCVAG00000005489pabpc1b10087.950Cyprinodon_variegatus
ENSPMEG00000001334pabpc1a10098.740ENSCVAG00000021872pabpc1a10098.740Cyprinodon_variegatus
ENSPMEG00000001334pabpc1a10091.693ENSDARG00000017219pabpc1a10091.693Danio_rerio
ENSPMEG00000001334pabpc1a10089.498ENSDARG00000021140pabpc1b9992.199Danio_rerio
ENSPMEG00000001334pabpc1a5880.423ENSDNOG00000030926-9878.571Dasypus_novemcinctus
ENSPMEG00000001334pabpc1a5877.551ENSDORG00000011362-9877.551Dipodomys_ordii
ENSPMEG00000001334pabpc1a5978.641ENSEASG00005010399-9878.641Equus_asinus_asinus
ENSPMEG00000001334pabpc1a5978.641ENSECAG00000002620-9878.641Equus_caballus
ENSPMEG00000001334pabpc1a5976.020ENSEEUG00000008203-9876.020Erinaceus_europaeus
ENSPMEG00000001334pabpc1a9994.025ENSELUG00000003614pabpc1a10094.025Esox_lucius
ENSPMEG00000001334pabpc1a10088.906ENSELUG00000015062-10088.594Esox_lucius
ENSPMEG00000001334pabpc1a5958.621ENSELUG00000005389-9758.621Esox_lucius
ENSPMEG00000001334pabpc1a5880.102ENSFCAG00000039701-9880.102Felis_catus
ENSPMEG00000001334pabpc1a5880.102ENSFDAG00000005484-9880.102Fukomys_damarensis
ENSPMEG00000001334pabpc1a10098.740ENSFHEG00000018979pabpc1a10098.740Fundulus_heteroclitus
ENSPMEG00000001334pabpc1a10089.498ENSFHEG00000008186pabpc1b10089.655Fundulus_heteroclitus
ENSPMEG00000001334pabpc1a10081.085ENSGMOG00000002448-10080.465Gadus_morhua
ENSPMEG00000001334pabpc1a9993.818ENSGMOG00000013448pabpc1a9993.509Gadus_morhua
ENSPMEG00000001334pabpc1a10098.740ENSGAFG00000019750pabpc1a10098.740Gambusia_affinis
ENSPMEG00000001334pabpc1a10090.282ENSGAFG00000010193pabpc1b10090.282Gambusia_affinis
ENSPMEG00000001334pabpc1a10088.372ENSGACG00000003771pabpc1b10088.372Gasterosteus_aculeatus
ENSPMEG00000001334pabpc1a10098.110ENSGACG00000003572pabpc1a10098.110Gasterosteus_aculeatus
ENSPMEG00000001334pabpc1a5880.102ENSGGOG00000038606-9880.102Gorilla_gorilla
ENSPMEG00000001334pabpc1a5880.102ENSGGOG00000043933-9880.102Gorilla_gorilla
ENSPMEG00000001334pabpc1a10089.342ENSHBUG00000002075pabpc1b10089.185Haplochromis_burtoni
ENSPMEG00000001334pabpc1a10098.110ENSHBUG00000020487pabpc1a10098.110Haplochromis_burtoni
ENSPMEG00000001334pabpc1a5879.082ENSHGLG00000019668-9879.082Heterocephalus_glaber_female
ENSPMEG00000001334pabpc1a5879.082ENSHGLG00000019762-9879.082Heterocephalus_glaber_female
ENSPMEG00000001334pabpc1a5879.082ENSHGLG00100020854-9879.082Heterocephalus_glaber_male
ENSPMEG00000001334pabpc1a9869.440ENSHCOG00000003175pabpc1b9969.120Hippocampus_comes
ENSPMEG00000001334pabpc1a10097.953ENSHCOG00000013502pabpc1a10097.953Hippocampus_comes
ENSPMEG00000001334pabpc1a10085.086ENSIPUG00000010791-10084.929Ictalurus_punctatus
ENSPMEG00000001334pabpc1a8158.209ENSIPUG00000018724-7558.209Ictalurus_punctatus
ENSPMEG00000001334pabpc1a10090.236ENSIPUG00000008848pabpc1a10090.079Ictalurus_punctatus
ENSPMEG00000001334pabpc1a7555.925ENSIPUG00000021244-6355.983Ictalurus_punctatus
ENSPMEG00000001334pabpc1a5879.592ENSSTOG00000022096-9879.592Ictidomys_tridecemlineatus
ENSPMEG00000001334pabpc1a5879.592ENSSTOG00000026028-9879.592Ictidomys_tridecemlineatus
ENSPMEG00000001334pabpc1a5878.571ENSJJAG00000007037-9878.571Jaculus_jaculus
ENSPMEG00000001334pabpc1a10088.679ENSKMAG00000008049pabpc1b10088.836Kryptolebias_marmoratus
ENSPMEG00000001334pabpc1a10098.740ENSKMAG00000000605pabpc1a10098.740Kryptolebias_marmoratus
ENSPMEG00000001334pabpc1a10097.638ENSLBEG00000024002-10097.638Labrus_bergylta
ENSPMEG00000001334pabpc1a10089.342ENSLBEG00000026845pabpc1b10089.028Labrus_bergylta
ENSPMEG00000001334pabpc1a5878.974ENSLAFG00000023096-9878.974Loxodonta_africana
ENSPMEG00000001334pabpc1a5879.695ENSMFAG00000028878-9879.695Macaca_fascicularis
ENSPMEG00000001334pabpc1a5880.102ENSMMUG00000009740-9880.102Macaca_mulatta
ENSPMEG00000001334pabpc1a5880.102ENSMMUG00000037681-9880.102Macaca_mulatta
ENSPMEG00000001334pabpc1a5880.102ENSMMUG00000039929-9880.102Macaca_mulatta
ENSPMEG00000001334pabpc1a5880.102ENSMNEG00000037732-9880.102Macaca_nemestrina
ENSPMEG00000001334pabpc1a5880.102ENSMLEG00000027495-9880.102Mandrillus_leucophaeus
ENSPMEG00000001334pabpc1a10098.268ENSMAMG00000004502-10098.268Mastacembelus_armatus
ENSPMEG00000001334pabpc1a10089.655ENSMAMG00000014610pabpc1b10089.812Mastacembelus_armatus
ENSPMEG00000001334pabpc1a10098.110ENSMZEG00005025416pabpc1a10098.110Maylandia_zebra
ENSPMEG00000001334pabpc1a10089.342ENSMZEG00005026745pabpc1b10089.185Maylandia_zebra
ENSPMEG00000001334pabpc1a5880.102ENSMICG00000047642-9880.102Microcebus_murinus
ENSPMEG00000001334pabpc1a10095.938ENSMMOG00000018044pabpc1a10095.938Mola_mola
ENSPMEG00000001334pabpc1a10084.458ENSMMOG00000018009pabpc1b10084.144Mola_mola
ENSPMEG00000001334pabpc1a9872.973ENSMODG00000013156-9872.843Monodelphis_domestica
ENSPMEG00000001334pabpc1a9966.354ENSMODG00000015024-9965.831Monodelphis_domestica
ENSPMEG00000001334pabpc1a10083.673ENSMALG00000006066pabpc1b10085.400Monopterus_albus
ENSPMEG00000001334pabpc1a10097.953ENSMALG00000013020-10097.953Monopterus_albus
ENSPMEG00000001334pabpc1a5881.967ENSNGAG00000012688-9878.571Nannospalax_galili
ENSPMEG00000001334pabpc1a10089.342ENSNBRG00000013737pabpc1b10089.185Neolamprologus_brichardi
ENSPMEG00000001334pabpc1a10097.953ENSNBRG00000003068-10097.953Neolamprologus_brichardi
ENSPMEG00000001334pabpc1a5880.102ENSNLEG00000018128-9880.102Nomascus_leucogenys
ENSPMEG00000001334pabpc1a5879.592ENSODEG00000018540-9879.592Octodon_degus
ENSPMEG00000001334pabpc1a10089.342ENSONIG00000002717pabpc1b10089.185Oreochromis_niloticus
ENSPMEG00000001334pabpc1a10097.323ENSONIG00000006871-10097.323Oreochromis_niloticus
ENSPMEG00000001334pabpc1a5880.102ENSOCUG00000002565-9880.102Oryctolagus_cuniculus
ENSPMEG00000001334pabpc1a10084.772ENSORLG00000003008-10084.458Oryzias_latipes
ENSPMEG00000001334pabpc1a9998.571ENSORLG00000002691pabpc1a10097.008Oryzias_latipes
ENSPMEG00000001334pabpc1a10097.165ENSORLG00020022398pabpc1a10097.165Oryzias_latipes_hni
ENSPMEG00000001334pabpc1a10084.772ENSORLG00020022259-10084.458Oryzias_latipes_hni
ENSPMEG00000001334pabpc1a10097.008ENSORLG00015013633pabpc110097.008Oryzias_latipes_hsok
ENSPMEG00000001334pabpc1a10085.086ENSORLG00015010932-10084.772Oryzias_latipes_hsok
ENSPMEG00000001334pabpc1a9481.465ENSOMEG00000013627pabpc1b10081.465Oryzias_melastigma
ENSPMEG00000001334pabpc1a10097.953ENSOMEG00000020219pabpc1a10097.953Oryzias_melastigma
ENSPMEG00000001334pabpc1a5880.102ENSOGAG00000029513-9880.102Otolemur_garnettii
ENSPMEG00000001334pabpc1a5880.102ENSOGAG00000026047-9880.102Otolemur_garnettii
ENSPMEG00000001334pabpc1a5880.102ENSOARG00000005943-9880.102Ovis_aries
ENSPMEG00000001334pabpc1a5880.102ENSPPAG00000012920-9880.102Pan_paniscus
ENSPMEG00000001334pabpc1a5880.102ENSPPRG00000011804-9880.102Panthera_pardus
ENSPMEG00000001334pabpc1a5880.102ENSPPRG00000011809-9880.102Panthera_pardus
ENSPMEG00000001334pabpc1a5880.102ENSPTRG00000028252-9880.102Pan_troglodytes
ENSPMEG00000001334pabpc1a5880.102ENSPANG00000011549-9880.102Papio_anubis
ENSPMEG00000001334pabpc1a10090.282ENSPKIG00000005676pabpc1b10090.282Paramormyrops_kingsleyae
ENSPMEG00000001334pabpc1a7098.202ENSPMGG00000022487pabpc1a9298.202Periophthalmus_magnuspinnatus
ENSPMEG00000001334pabpc1a7091.928ENSPMGG00000023134-9791.928Periophthalmus_magnuspinnatus
ENSPMEG00000001334pabpc1a9972.108ENSPCIG00000016995-5571.905Phascolarctos_cinereus
ENSPMEG00000001334pabpc1a10088.871ENSPFOG00000005917pabpc1b10089.969Poecilia_formosa
ENSPMEG00000001334pabpc1a10097.991ENSPFOG00000010815pabpc1a10097.991Poecilia_formosa
ENSPMEG00000001334pabpc1a100100.000ENSPLAG00000004114pabpc1a100100.000Poecilia_latipinna
ENSPMEG00000001334pabpc1a10089.185ENSPLAG00000001388pabpc1b10090.282Poecilia_latipinna
ENSPMEG00000001334pabpc1a10096.724ENSPREG00000019595pabpc1a10096.724Poecilia_reticulata
ENSPMEG00000001334pabpc1a10089.185ENSPREG00000010911pabpc1b10090.282Poecilia_reticulata
ENSPMEG00000001334pabpc1a5880.102ENSPPYG00000020468-9880.102Pongo_abelii
ENSPMEG00000001334pabpc1a5980.102ENSPCAG00000005308-9880.102Procavia_capensis
ENSPMEG00000001334pabpc1a5879.592ENSPCOG00000026349-9879.592Propithecus_coquereli
ENSPMEG00000001334pabpc1a5980.513ENSPVAG00000016117-9880.513Pteropus_vampyrus
ENSPMEG00000001334pabpc1a10098.110ENSPNYG00000005192pabpc1a10098.110Pundamilia_nyererei
ENSPMEG00000001334pabpc1a10089.342ENSPNYG00000012578pabpc1b10089.185Pundamilia_nyererei
ENSPMEG00000001334pabpc1a10089.969ENSPNAG00000024626pabpc1b10089.812Pygocentrus_nattereri
ENSPMEG00000001334pabpc1a10091.052ENSPNAG00000028408pabpc1a10090.738Pygocentrus_nattereri
ENSPMEG00000001334pabpc1a9989.671ENSRBIG00000028738-9589.671Rhinopithecus_bieti
ENSPMEG00000001334pabpc1a5880.102ENSRBIG00000027173-9880.102Rhinopithecus_bieti
ENSPMEG00000001334pabpc1a5880.102ENSRROG00000017404-9880.102Rhinopithecus_roxellana
ENSPMEG00000001334pabpc1a9864.103ENSSHAG00000000511-10063.782Sarcophilus_harrisii
ENSPMEG00000001334pabpc1a10090.424ENSSFOG00015002752-10090.110Scleropages_formosus
ENSPMEG00000001334pabpc1a6978.613ENSSFOG00015019668-8878.613Scleropages_formosus
ENSPMEG00000001334pabpc1a10089.953ENSSFOG00015006662pabpc1a10089.953Scleropages_formosus
ENSPMEG00000001334pabpc1a10088.871ENSSMAG00000006869pabpc1b10088.715Scophthalmus_maximus
ENSPMEG00000001334pabpc1a10097.953ENSSMAG00000010803pabpc1a10097.953Scophthalmus_maximus
ENSPMEG00000001334pabpc1a10098.110ENSSDUG00000006675pabpc1a10098.110Seriola_dumerili
ENSPMEG00000001334pabpc1a10088.401ENSSDUG00000011965pabpc1b10088.245Seriola_dumerili
ENSPMEG00000001334pabpc1a10090.047ENSSLDG00000014156pabpc1b10089.891Seriola_lalandi_dorsalis
ENSPMEG00000001334pabpc1a10098.110ENSSLDG00000011661pabpc1a10098.110Seriola_lalandi_dorsalis
ENSPMEG00000001334pabpc1a10098.740ENSSPAG00000014453-10098.740Stegastes_partitus
ENSPMEG00000001334pabpc1a10090.596ENSSPAG00000019265pabpc1b10090.439Stegastes_partitus
ENSPMEG00000001334pabpc1a5880.102ENSSSCG00000036336-9880.102Sus_scrofa
ENSPMEG00000001334pabpc1a5880.102ENSSSCG00000032167-9880.102Sus_scrofa
ENSPMEG00000001334pabpc1a10086.228ENSTRUG00000003767-10086.228Takifugu_rubripes
ENSPMEG00000001334pabpc1a10095.283ENSTRUG00000011577-10095.755Takifugu_rubripes
ENSPMEG00000001334pabpc1a10086.760ENSTNIG00000009153pabpc1b10086.137Tetraodon_nigroviridis
ENSPMEG00000001334pabpc1a10092.868ENSTNIG00000013307pabpc1a10093.333Tetraodon_nigroviridis
ENSPMEG00000001334pabpc1a5880.102ENSTTRG00000013181-9880.102Tursiops_truncatus
ENSPMEG00000001334pabpc1a5880.102ENSUAMG00000008089-9880.102Ursus_americanus
ENSPMEG00000001334pabpc1a5880.102ENSUMAG00000003364-9880.102Ursus_maritimus
ENSPMEG00000001334pabpc1a9754.045ENSUMAG00000023926-8969.890Ursus_maritimus
ENSPMEG00000001334pabpc1a5879.000ENSVVUG00000015892-9779.000Vulpes_vulpes
ENSPMEG00000001334pabpc1a9745.921ENSXETG00000015439-9745.161Xenopus_tropicalis
ENSPMEG00000001334pabpc1a10085.893ENSXCOG00000019901pabpc1b10085.737Xiphophorus_couchianus
ENSPMEG00000001334pabpc1a10092.756ENSXCOG00000017066pabpc1a10092.756Xiphophorus_couchianus
ENSPMEG00000001334pabpc1a10099.055ENSXMAG00000002555pabpc1a10099.055Xiphophorus_maculatus
ENSPMEG00000001334pabpc1a10089.342ENSXMAG00000003753pabpc1b10090.282Xiphophorus_maculatus

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