EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSPMEG00000001411 (Gene tree)
Gene ID: 106922175
Gene Symbol: -
Alias: -
Full Name: zinc finger protein 34-like
Gene Type: protein_coding
Species: Poecilia_mexicana
Status: putative
Strand: Plus strand
Length: 4816 bases
Position: chrKQ551012.1:221731-226546
Accession: 106922175
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSPMEP00000000617	zf-C2H2	PF00096.26	8.2e-18	1	3
ENSPMEP00000000617	zf-C2H2	PF00096.26	8.2e-18	2	3
ENSPMEP00000000617	zf-C2H2	PF00096.26	8.2e-18	3	3
ENSPMEP00000000617	zf-met	PF12874.7	0.00028	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSPMET00000015593	-	2514	XM_014994384	ENSPMEP00000000617	671 (aa)	XP_014849870	UPI00072E6A49

Gene Model

Click here to download ENSPMEG00000001411's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSPMEG00000001411's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSPMEG00000001411	-	50	31.489	ENSPMEG00000015216	zbtb41	59	31.915
ENSPMEG00000001411	-	54	33.878	ENSPMEG00000012424	-	98	33.740
ENSPMEG00000001411	-	91	37.615	ENSPMEG00000019173	-	98	37.615
ENSPMEG00000001411	-	93	37.113	ENSPMEG00000016548	-	95	37.113
ENSPMEG00000001411	-	60	37.850	ENSPMEG00000020849	-	76	37.850
ENSPMEG00000001411	-	92	37.443	ENSPMEG00000019229	-	98	37.443

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSPMEG00000001411	-	94	95.701	ENSGAFG00000016139	-	100	95.701	Gambusia_affinis
ENSPMEG00000001411	-	51	61.988	ENSMALG00000014761	-	99	61.988	Monopterus_albus
ENSPMEG00000001411	-	93	62.360	ENSORLG00000014311	-	99	62.360	Oryzias_latipes
ENSPMEG00000001411	-	93	62.679	ENSORLG00020016116	-	99	62.679	Oryzias_latipes_hni
ENSPMEG00000001411	-	93	61.244	ENSORLG00015014797	-	99	61.244	Oryzias_latipes_hsok
ENSPMEG00000001411	-	94	97.331	ENSPFOG00000004204	-	100	97.331	Poecilia_formosa
ENSPMEG00000001411	-	100	99.255	ENSPLAG00000022088	-	100	99.255	Poecilia_latipinna
ENSPMEG00000001411	-	94	97.611	ENSPREG00000004161	-	100	97.611	Poecilia_reticulata
ENSPMEG00000001411	-	90	65.728	ENSPNYG00000020534	-	100	65.449	Pundamilia_nyererei
ENSPMEG00000001411	-	94	96.656	ENSXMAG00000011035	-	100	96.656	Xiphophorus_maculatus