EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSPMEG00000001520 (Gene tree)
Gene ID: 106904636
Gene Symbol: -
Alias: -
Full Name: serrate RNA effector molecule homolog
Gene Type: protein_coding
Species: Poecilia_mexicana
Status: putative
Strand: Plus strand
Length: 8614 bases
Position: chrKQ552976.1:97600-106213
Accession: 106904636
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSPMEP00000000688	ARS2	PF04959.13	5.3e-82	1	1
ENSPMEP00000021356	ARS2	PF04959.13	5.3e-82	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSPMET00000015456	-	4239	XM_014969058	ENSPMEP00000000688	793 (aa)	XP_014824544	-
ENSPMET00000015445	-	4310	-	ENSPMEP00000021356	793 (aa)	-	-

Gene Model

Click here to download ENSPMEG00000001520's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSPMEG00000001520's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSPMEG00000001520	-	79	63.719	ENSPMEG00000001182	srrt	77	64.455

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSPMEG00000001520	-	53	60.682	ENSG00000087087	SRRT	98	67.391	Homo_sapiens
ENSPMEG00000001520	-	53	63.182	ENSAPOG00000002304	srrt	88	54.248	Acanthochromis_polyacanthus
ENSPMEG00000001520	-	89	60.870	ENSAMEG00000014506	SRRT	76	60.321	Ailuropoda_melanoleuca
ENSPMEG00000001520	-	92	54.954	ENSACIG00000015795	srrt	88	54.570	Amphilophus_citrinellus
ENSPMEG00000001520	-	90	75.098	ENSAOCG00000009189	-	95	75.396	Amphiprion_ocellaris
ENSPMEG00000001520	-	94	56.177	ENSAOCG00000009693	srrt	88	55.782	Amphiprion_ocellaris
ENSPMEG00000001520	-	90	75.098	ENSAPEG00000020016	-	95	75.396	Amphiprion_percula
ENSPMEG00000001520	-	94	56.283	ENSAPEG00000003646	srrt	87	55.374	Amphiprion_percula
ENSPMEG00000001520	-	92	55.952	ENSATEG00000014425	srrt	88	54.656	Anabas_testudineus
ENSPMEG00000001520	-	56	79.787	ENSATEG00000003652	-	81	83.565	Anabas_testudineus
ENSPMEG00000001520	-	51	61.321	ENSACAG00000001014	SRRT	88	51.684	Anolis_carolinensis
ENSPMEG00000001520	-	53	59.732	ENSANAG00000031718	SRRT	90	52.010	Aotus_nancymaae
ENSPMEG00000001520	-	90	75.389	ENSACLG00000009423	-	95	75.483	Astatotilapia_calliptera
ENSPMEG00000001520	-	53	59.955	ENSBTAG00000001134	SRRT	90	51.508	Bos_taurus
ENSPMEG00000001520	-	72	37.500	WBGene00017085	E01A2.2	69	42.663	Caenorhabditis_elegans
ENSPMEG00000001520	-	53	59.955	ENSCJAG00000014917	SRRT	90	52.428	Callithrix_jacchus
ENSPMEG00000001520	-	95	52.848	ENSCAFG00000023538	SRRT	90	51.256	Canis_familiaris
ENSPMEG00000001520	-	97	52.948	ENSCAFG00020013358	SRRT	94	50.318	Canis_lupus_dingo
ENSPMEG00000001520	-	53	59.910	ENSCHIG00000010495	SRRT	90	51.256	Capra_hircus
ENSPMEG00000001520	-	95	52.515	ENSTSYG00000036426	SRRT	93	51.023	Carlito_syrichta
ENSPMEG00000001520	-	53	61.327	ENSCAPG00000013586	SRRT	94	53.367	Cavia_aperea
ENSPMEG00000001520	-	53	60.045	ENSCPOG00000001739	SRRT	90	52.447	Cavia_porcellus
ENSPMEG00000001520	-	53	59.732	ENSCCAG00000015877	SRRT	90	52.506	Cebus_capucinus
ENSPMEG00000001520	-	53	59.910	ENSCATG00000036306	SRRT	94	50.850	Cercocebus_atys
ENSPMEG00000001520	-	95	52.734	ENSCLAG00000007568	SRRT	90	52.136	Chinchilla_lanigera
ENSPMEG00000001520	-	53	59.732	ENSCSAG00000017996	SRRT	90	51.633	Chlorocebus_sabaeus
ENSPMEG00000001520	-	54	62.774	ENSCHOG00000007815	SRRT	64	56.173	Choloepus_hoffmanni
ENSPMEG00000001520	-	69	58.605	ENSCPBG00000011553	SRRT	70	57.561	Chrysemys_picta_bellii
ENSPMEG00000001520	-	89	40.127	ENSCSAVG00000008394	-	82	52.326	Ciona_savignyi
ENSPMEG00000001520	-	53	59.910	ENSCANG00000034556	SRRT	90	52.010	Colobus_angolensis_palliatus
ENSPMEG00000001520	-	53	59.508	ENSCGRG00001001594	Srrt	90	52.743	Cricetulus_griseus_chok1gshd
ENSPMEG00000001520	-	71	60.390	ENSCGRG00000007292	Srrt	84	55.234	Cricetulus_griseus_crigri
ENSPMEG00000001520	-	82	81.283	ENSCSEG00000005233	-	95	67.319	Cynoglossus_semilaevis
ENSPMEG00000001520	-	93	82.290	ENSCVAG00000017344	-	98	82.405	Cyprinodon_variegatus
ENSPMEG00000001520	-	94	55.625	ENSCVAG00000019848	srrt	88	55.585	Cyprinodon_variegatus
ENSPMEG00000001520	-	94	62.613	ENSDARG00000017762	srrt	81	62.812	Danio_rerio
ENSPMEG00000001520	-	53	59.732	ENSDNOG00000003851	SRRT	90	51.436	Dasypus_novemcinctus
ENSPMEG00000001520	-	53	60.271	ENSDORG00000005584	Srrt	90	52.592	Dipodomys_ordii
ENSPMEG00000001520	-	92	46.245	FBgn0033062	Ars2	64	51.306	Drosophila_melanogaster
ENSPMEG00000001520	-	76	57.582	ENSETEG00000016175	SRRT	65	56.923	Echinops_telfairi
ENSPMEG00000001520	-	74	49.271	ENSEBUG00000008517	-	50	66.471	Eptatretus_burgeri
ENSPMEG00000001520	-	95	52.121	ENSEASG00005016956	SRRT	90	51.633	Equus_asinus_asinus
ENSPMEG00000001520	-	95	52.121	ENSECAG00000012292	SRRT	90	51.633	Equus_caballus
ENSPMEG00000001520	-	77	62.821	ENSEEUG00000009117	SRRT	82	54.808	Erinaceus_europaeus
ENSPMEG00000001520	-	85	63.288	ENSELUG00000006651	srrt	81	63.946	Esox_lucius
ENSPMEG00000001520	-	90	63.125	ENSELUG00000021216	-	88	63.325	Esox_lucius
ENSPMEG00000001520	-	53	59.955	ENSFCAG00000006855	SRRT	90	51.508	Felis_catus
ENSPMEG00000001520	-	54	76.667	ENSFHEG00000004105	-	89	75.510	Fundulus_heteroclitus
ENSPMEG00000001520	-	78	63.377	ENSFHEG00000002756	srrt	80	64.481	Fundulus_heteroclitus
ENSPMEG00000001520	-	81	72.584	ENSGMOG00000018694	-	80	65.964	Gadus_morhua
ENSPMEG00000001520	-	97	95.238	ENSGAFG00000020383	-	95	95.624	Gambusia_affinis
ENSPMEG00000001520	-	90	68.983	ENSGACG00000001100	-	81	79.714	Gasterosteus_aculeatus
ENSPMEG00000001520	-	53	59.910	ENSGGOG00000001508	SRRT	90	52.020	Gorilla_gorilla
ENSPMEG00000001520	-	95	52.536	ENSHGLG00000008344	Srrt	90	51.945	Heterocephalus_glaber_female
ENSPMEG00000001520	-	95	53.106	ENSHGLG00100018857	Srrt	90	52.339	Heterocephalus_glaber_male
ENSPMEG00000001520	-	93	70.230	ENSHCOG00000008904	-	94	71.484	Hippocampus_comes
ENSPMEG00000001520	-	96	56.187	ENSHCOG00000005403	srrt	88	54.631	Hippocampus_comes
ENSPMEG00000001520	-	53	59.910	ENSSTOG00000013776	SRRT	90	51.515	Ictidomys_tridecemlineatus
ENSPMEG00000001520	-	95	53.440	ENSJJAG00000010446	Srrt	90	52.423	Jaculus_jaculus
ENSPMEG00000001520	-	90	76.852	ENSKMAG00000008468	-	90	73.651	Kryptolebias_marmoratus
ENSPMEG00000001520	-	92	56.143	ENSKMAG00000013599	srrt	88	55.630	Kryptolebias_marmoratus
ENSPMEG00000001520	-	95	55.266	ENSLBEG00000016308	srrt	88	54.749	Labrus_bergylta
ENSPMEG00000001520	-	66	67.055	ENSLBEG00000028983	-	97	65.539	Labrus_bergylta
ENSPMEG00000001520	-	94	46.438	ENSLACG00000001089	SRRT	89	46.015	Latimeria_chalumnae
ENSPMEG00000001520	-	73	63.580	ENSLOCG00000013658	srrt	81	52.914	Lepisosteus_oculatus
ENSPMEG00000001520	-	53	59.732	ENSLAFG00000007725	SRRT	90	51.945	Loxodonta_africana
ENSPMEG00000001520	-	53	59.910	ENSMFAG00000033745	SRRT	94	50.995	Macaca_fascicularis
ENSPMEG00000001520	-	53	59.732	ENSMMUG00000021255	SRRT	90	51.633	Macaca_mulatta
ENSPMEG00000001520	-	53	59.732	ENSMNEG00000041864	SRRT	92	50.995	Macaca_nemestrina
ENSPMEG00000001520	-	53	59.910	ENSMLEG00000029479	SRRT	92	50.995	Mandrillus_leucophaeus
ENSPMEG00000001520	-	90	76.178	ENSMAMG00000010681	-	95	75.458	Mastacembelus_armatus
ENSPMEG00000001520	-	90	75.518	ENSMZEG00005028002	-	95	75.604	Maylandia_zebra
ENSPMEG00000001520	-	53	59.508	ENSMAUG00000011386	Srrt	90	52.823	Mesocricetus_auratus
ENSPMEG00000001520	-	53	59.955	ENSMICG00000009471	SRRT	92	51.493	Microcebus_murinus
ENSPMEG00000001520	-	53	59.284	ENSMOCG00000001971	Srrt	90	52.506	Microtus_ochrogaster
ENSPMEG00000001520	-	82	71.041	ENSMMOG00000011137	-	85	70.613	Mola_mola
ENSPMEG00000001520	-	93	56.888	ENSMMOG00000016399	srrt	88	55.376	Mola_mola
ENSPMEG00000001520	-	53	57.301	ENSMODG00000004862	SRRT	84	57.802	Monodelphis_domestica
ENSPMEG00000001520	-	66	54.874	ENSMALG00000005567	-	93	53.818	Monopterus_albus
ENSPMEG00000001520	-	53	60.412	MGP_CAROLIEiJ_G0027870	Srrt	99	55.797	Mus_caroli
ENSPMEG00000001520	-	53	60.412	ENSMUSG00000037364	Srrt	99	55.797	Mus_musculus
ENSPMEG00000001520	-	53	60.412	MGP_PahariEiJ_G0024456	Srrt	99	55.797	Mus_pahari
ENSPMEG00000001520	-	53	60.412	MGP_SPRETEiJ_G0028875	Srrt	99	55.797	Mus_spretus
ENSPMEG00000001520	-	95	52.473	ENSMPUG00000015839	SRRT	90	51.382	Mustela_putorius_furo
ENSPMEG00000001520	-	53	59.284	ENSMLUG00000009975	SRRT	90	51.131	Myotis_lucifugus
ENSPMEG00000001520	-	53	59.284	ENSNGAG00000023715	Srrt	97	53.156	Nannospalax_galili
ENSPMEG00000001520	-	51	62.945	ENSNBRG00000019100	srrt	88	52.789	Neolamprologus_brichardi
ENSPMEG00000001520	-	94	49.320	ENSNLEG00000011987	SRRT	94	49.410	Nomascus_leucogenys
ENSPMEG00000001520	-	93	45.466	ENSMEUG00000011941	SRRT	88	44.656	Notamacropus_eugenii
ENSPMEG00000001520	-	58	61.254	ENSOPRG00000002502	-	56	60.756	Ochotona_princeps
ENSPMEG00000001520	-	53	61.098	ENSODEG00000016856	SRRT	90	53.612	Octodon_degus
ENSPMEG00000001520	-	90	75.452	ENSONIG00000016080	-	90	74.463	Oreochromis_niloticus
ENSPMEG00000001520	-	95	55.556	ENSOMEG00000003155	srrt	89	54.642	Oryzias_melastigma
ENSPMEG00000001520	-	97	75.754	ENSOMEG00000006963	-	95	75.628	Oryzias_melastigma
ENSPMEG00000001520	-	53	59.955	ENSOGAG00000017242	SRRT	90	51.633	Otolemur_garnettii
ENSPMEG00000001520	-	53	59.910	ENSOARG00000015645	SRRT	90	51.389	Ovis_aries
ENSPMEG00000001520	-	53	59.910	ENSPPAG00000041090	SRRT	90	52.146	Pan_paniscus
ENSPMEG00000001520	-	53	60.135	ENSPPRG00000009557	SRRT	90	51.707	Panthera_pardus
ENSPMEG00000001520	-	95	52.352	ENSPTIG00000014355	SRRT	90	51.633	Panthera_tigris_altaica
ENSPMEG00000001520	-	53	59.910	ENSPTRG00000019511	SRRT	95	50.434	Pan_troglodytes
ENSPMEG00000001520	-	53	58.462	ENSPANG00000020763	SRRT	93	50.790	Papio_anubis
ENSPMEG00000001520	-	95	55.846	ENSPKIG00000005434	srrt	90	54.134	Paramormyrops_kingsleyae
ENSPMEG00000001520	-	94	54.545	ENSPKIG00000022212	-	89	53.756	Paramormyrops_kingsleyae
ENSPMEG00000001520	-	52	59.629	ENSPSIG00000016311	SRRT	89	51.279	Pelodiscus_sinensis
ENSPMEG00000001520	-	94	54.639	ENSPMGG00000002841	srrt	88	54.813	Periophthalmus_magnuspinnatus
ENSPMEG00000001520	-	53	60.412	ENSPEMG00000010834	Srrt	90	52.934	Peromyscus_maniculatus_bairdii
ENSPMEG00000001520	-	95	48.897	ENSPMAG00000009614	-	52	56.889	Petromyzon_marinus
ENSPMEG00000001520	-	53	59.375	ENSPCIG00000000816	SRRT	90	51.247	Phascolarctos_cinereus
ENSPMEG00000001520	-	100	99.748	ENSPFOG00000016554	-	97	99.748	Poecilia_formosa
ENSPMEG00000001520	-	100	98.739	ENSPLAG00000004526	-	97	98.739	Poecilia_latipinna
ENSPMEG00000001520	-	94	55.092	ENSPREG00000022308	srrt	88	51.777	Poecilia_reticulata
ENSPMEG00000001520	-	53	57.582	ENSPCAG00000001621	SRRT	90	49.627	Procavia_capensis
ENSPMEG00000001520	-	53	60.135	ENSPCOG00000025751	SRRT	90	52.136	Propithecus_coquereli
ENSPMEG00000001520	-	62	59.722	ENSPVAG00000000834	SRRT	75	60.274	Pteropus_vampyrus
ENSPMEG00000001520	-	57	58.042	ENSPNAG00000010629	srrt	62	55.556	Pygocentrus_nattereri
ENSPMEG00000001520	-	53	49.548	ENSRNOG00000048277	AABR07035787.1	87	49.321	Rattus_norvegicus
ENSPMEG00000001520	-	53	59.732	ENSRBIG00000035718	SRRT	92	50.995	Rhinopithecus_bieti
ENSPMEG00000001520	-	53	59.732	ENSRROG00000030622	SRRT	92	50.995	Rhinopithecus_roxellana
ENSPMEG00000001520	-	53	59.910	ENSSBOG00000033570	SRRT	91	52.146	Saimiri_boliviensis_boliviensis
ENSPMEG00000001520	-	69	49.045	ENSSHAG00000007349	-	70	59.778	Sarcophilus_harrisii
ENSPMEG00000001520	-	81	70.152	ENSSMAG00000018195	-	94	68.836	Scophthalmus_maximus
ENSPMEG00000001520	-	92	56.653	ENSSMAG00000015342	srrt	88	55.601	Scophthalmus_maximus
ENSPMEG00000001520	-	52	63.721	ENSSDUG00000002051	-	88	63.719	Seriola_dumerili
ENSPMEG00000001520	-	92	53.290	ENSSLDG00000017477	srrt	76	64.096	Seriola_lalandi_dorsalis
ENSPMEG00000001520	-	88	74.366	ENSSPAG00000018943	-	97	74.841	Stegastes_partitus
ENSPMEG00000001520	-	93	73.572	ENSTRUG00000000023	-	94	73.028	Takifugu_rubripes
ENSPMEG00000001520	-	53	61.435	ENSTRUG00000016075	srrt	88	49.490	Takifugu_rubripes
ENSPMEG00000001520	-	91	68.264	ENSTNIG00000003111	-	88	68.359	Tetraodon_nigroviridis
ENSPMEG00000001520	-	72	51.975	ENSTNIG00000011779	srrt	67	60.739	Tetraodon_nigroviridis
ENSPMEG00000001520	-	53	59.732	ENSTTRG00000011104	SRRT	90	51.256	Tursiops_truncatus
ENSPMEG00000001520	-	53	59.732	ENSUAMG00000027997	SRRT	92	51.382	Ursus_americanus
ENSPMEG00000001520	-	53	59.732	ENSUMAG00000011295	SRRT	90	51.382	Ursus_maritimus
ENSPMEG00000001520	-	95	52.848	ENSVVUG00000023572	SRRT	90	51.256	Vulpes_vulpes
ENSPMEG00000001520	-	95	47.273	ENSXETG00000025124	srrt	93	50.610	Xenopus_tropicalis
ENSPMEG00000001520	-	58	74.620	ENSXCOG00000013105	-	86	77.882	Xiphophorus_couchianus
ENSPMEG00000001520	-	100	96.370	ENSXMAG00000002090	-	97	96.370	Xiphophorus_maculatus
ENSPMEG00000001520	-	52	65.258	ENSXMAG00000007627	srrt	87	55.660	Xiphophorus_maculatus