EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSPMEG00000001717 (Gene tree)
Gene ID: 106927758
Gene Symbol: -
Alias: -
Full Name: GTP-binding protein SAR1b-like
Gene Type: protein_coding
Species: Poecilia_mexicana
Status: putative
Strand: Minus strand
Length: 5128 bases
Position: chrKQ551954.1:73573-78700
Accession: 106927758
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSPMEP00000000871	MMR_HSR1	PF01926.23	4.5e-06	1	1
ENSPMEP00000021474	MMR_HSR1	PF01926.23	4.7e-06	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSPMET00000015160	-	597	XM_015003527	ENSPMEP00000021474	198 (aa)	XP_014859013	UPI0004448E43
ENSPMET00000015156	-	3094	-	ENSPMEP00000000871	195 (aa)	-	-

Gene Model

Click here to download ENSPMEG00000001717's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSPMEG00000001717's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSPMEG00000001717	-	65	36.641	ENSPMEG00000021972	arl4d	65	36.641
ENSPMEG00000001717	-	85	30.357	ENSPMEG00000022283	arl8	87	30.357
ENSPMEG00000001717	-	91	31.183	ENSPMEG00000009906	-	96	31.183
ENSPMEG00000001717	-	57	35.135	ENSPMEG00000008907	arl3	61	35.135
ENSPMEG00000001717	-	64	37.795	ENSPMEG00000008427	-	61	37.795
ENSPMEG00000001717	-	97	30.412	ENSPMEG00000004015	arl8bb	93	30.412
ENSPMEG00000001717	-	75	32.500	ENSPMEG00000017237	arl8a	86	32.500
ENSPMEG00000001717	-	70	30.612	ENSPMEG00000013451	arfrp1	68	30.612
ENSPMEG00000001717	-	84	32.143	ENSPMEG00000011461	arl11	98	32.143
ENSPMEG00000001717	-	100	80.303	ENSPMEG00000016831	sar1b	100	80.303
ENSPMEG00000001717	-	57	36.937	ENSPMEG00000017082	-	62	34.351
ENSPMEG00000001717	-	61	36.364	ENSPMEG00000017081	-	74	36.364
ENSPMEG00000001717	-	93	30.220	ENSPMEG00000005938	arl1	91	30.220
ENSPMEG00000001717	-	88	32.164	ENSPMEG00000007064	-	88	32.164
ENSPMEG00000001717	-	91	30.435	ENSPMEG00000008489	ARL6	92	30.435
ENSPMEG00000001717	-	89	31.429	ENSPMEG00000004624	-	92	32.335
ENSPMEG00000001717	-	91	30.387	ENSPMEG00000022942	arf2b	93	30.387
ENSPMEG00000001717	-	89	32.778	ENSPMEG00000014418	-	85	32.778
ENSPMEG00000001717	-	64	32.800	ENSPMEG00000012201	-	69	32.800
ENSPMEG00000001717	-	62	35.000	ENSPMEG00000009605	arf5	67	35.000
ENSPMEG00000001717	-	73	35.417	ENSPMEG00000009877	arl2	78	35.417
ENSPMEG00000001717	-	64	32.800	ENSPMEG00000020422	arf3b	69	32.800
ENSPMEG00000001717	-	59	37.500	ENSPMEG00000007028	arl4cb	60	37.500
ENSPMEG00000001717	-	83	31.638	ENSPMEG00000009058	arl8ba	90	31.638
ENSPMEG00000001717	-	94	30.270	ENSPMEG00000024077	-	96	30.270
ENSPMEG00000001717	-	100	79.798	ENSPMEG00000000559	sar1ab	100	79.798

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSPMEG00000001717	-	100	77.778	ENSACIG00000019827	sar1ab	100	77.778	Amphilophus_citrinellus
ENSPMEG00000001717	-	100	79.293	ENSAOCG00000022062	sar1ab	100	79.293	Amphiprion_ocellaris
ENSPMEG00000001717	-	100	79.293	ENSAPEG00000011525	sar1ab	100	79.293	Amphiprion_percula
ENSPMEG00000001717	-	100	82.323	ENSATEG00000003466	sar1ab	100	82.323	Anabas_testudineus
ENSPMEG00000001717	-	100	76.768	ENSACLG00000013053	sar1ab	100	76.768	Astatotilapia_calliptera
ENSPMEG00000001717	-	100	81.818	ENSCSEG00000004825	sar1ab	100	81.818	Cynoglossus_semilaevis
ENSPMEG00000001717	-	100	79.293	ENSCVAG00000015162	sar1ab	100	79.293	Cyprinodon_variegatus
ENSPMEG00000001717	-	100	94.949	ENSCVAG00000006500	-	100	94.949	Cyprinodon_variegatus
ENSPMEG00000001717	-	100	81.313	ENSDARG00000033320	sar1ab	100	81.313	Danio_rerio
ENSPMEG00000001717	-	100	87.374	ENSELUG00000013652	sar1a	100	87.374	Esox_lucius
ENSPMEG00000001717	-	100	81.313	ENSELUG00000024279	sar1ab	100	81.313	Esox_lucius
ENSPMEG00000001717	-	100	96.970	ENSFHEG00000012352	-	100	96.970	Fundulus_heteroclitus
ENSPMEG00000001717	-	100	80.303	ENSFHEG00000021773	sar1ab	100	80.303	Fundulus_heteroclitus
ENSPMEG00000001717	-	100	79.798	ENSGMOG00000012588	sar1ab	100	79.798	Gadus_morhua
ENSPMEG00000001717	-	100	97.980	ENSGAFG00000004846	-	100	97.980	Gambusia_affinis
ENSPMEG00000001717	-	100	79.293	ENSGAFG00000009702	sar1ab	100	79.293	Gambusia_affinis
ENSPMEG00000001717	-	100	80.303	ENSGACG00000008616	sar1ab	100	80.303	Gasterosteus_aculeatus
ENSPMEG00000001717	-	100	77.273	ENSHBUG00000021221	sar1ab	100	77.273	Haplochromis_burtoni
ENSPMEG00000001717	-	100	79.798	ENSHCOG00000002845	sar1ab	80	79.798	Hippocampus_comes
ENSPMEG00000001717	-	100	78.283	ENSKMAG00000018006	sar1ab	100	78.283	Kryptolebias_marmoratus
ENSPMEG00000001717	-	100	81.818	ENSLBEG00000001114	sar1ab	100	81.818	Labrus_bergylta
ENSPMEG00000001717	-	100	80.808	ENSMAMG00000021314	sar1ab	100	80.808	Mastacembelus_armatus
ENSPMEG00000001717	-	100	76.768	ENSMZEG00005027606	sar1ab	100	76.768	Maylandia_zebra
ENSPMEG00000001717	-	100	81.818	ENSMMOG00000010360	sar1ab	100	81.818	Mola_mola
ENSPMEG00000001717	-	100	80.303	ENSMALG00000005831	sar1ab	100	80.303	Monopterus_albus
ENSPMEG00000001717	-	100	77.273	ENSNBRG00000018772	sar1ab	100	77.273	Neolamprologus_brichardi
ENSPMEG00000001717	-	100	78.283	ENSONIG00000018509	sar1ab	100	78.283	Oreochromis_niloticus
ENSPMEG00000001717	-	100	88.384	ENSORLG00000009132	-	90	88.384	Oryzias_latipes
ENSPMEG00000001717	-	100	80.303	ENSORLG00000006779	sar1ab	67	80.303	Oryzias_latipes
ENSPMEG00000001717	-	100	88.384	ENSORLG00020007024	-	90	88.384	Oryzias_latipes_hni
ENSPMEG00000001717	-	100	80.808	ENSORLG00020005458	sar1ab	100	80.808	Oryzias_latipes_hni
ENSPMEG00000001717	-	100	80.303	ENSORLG00015010542	sar1ab	100	80.303	Oryzias_latipes_hsok
ENSPMEG00000001717	-	100	87.879	ENSORLG00015006223	-	94	92.857	Oryzias_latipes_hsok
ENSPMEG00000001717	-	100	87.879	ENSOMEG00000012020	-	100	87.879	Oryzias_melastigma
ENSPMEG00000001717	-	100	80.808	ENSOMEG00000004948	sar1ab	100	80.808	Oryzias_melastigma
ENSPMEG00000001717	-	100	81.818	ENSPKIG00000007615	sar1ab	100	81.818	Paramormyrops_kingsleyae
ENSPMEG00000001717	-	100	82.323	ENSPMGG00000013330	sar1ab	100	82.323	Periophthalmus_magnuspinnatus
ENSPMEG00000001717	-	100	79.798	ENSPFOG00000023432	sar1ab	100	79.798	Poecilia_formosa
ENSPMEG00000001717	-	100	80.303	ENSPLAG00000023705	sar1ab	100	80.303	Poecilia_latipinna
ENSPMEG00000001717	-	100	79.798	ENSPREG00000016098	sar1ab	100	79.798	Poecilia_reticulata
ENSPMEG00000001717	-	100	77.273	ENSPNYG00000011603	sar1ab	100	77.273	Pundamilia_nyererei
ENSPMEG00000001717	-	100	81.818	ENSPNAG00000008007	sar1ab	100	81.818	Pygocentrus_nattereri
ENSPMEG00000001717	-	100	85.354	ENSSFOG00015014010	sar1a	100	85.354	Scleropages_formosus
ENSPMEG00000001717	-	58	85.217	ENSSMAG00000020758	sar1ab	83	85.217	Scophthalmus_maximus
ENSPMEG00000001717	-	100	81.313	ENSSDUG00000010773	sar1ab	100	81.313	Seriola_dumerili
ENSPMEG00000001717	-	100	81.313	ENSSLDG00000025558	sar1ab	100	81.313	Seriola_lalandi_dorsalis
ENSPMEG00000001717	-	100	79.798	ENSSPAG00000009194	sar1ab	100	79.798	Stegastes_partitus
ENSPMEG00000001717	-	100	79.798	ENSTRUG00000007269	sar1ab	100	79.798	Takifugu_rubripes
ENSPMEG00000001717	-	100	78.788	ENSTNIG00000008635	sar1ab	100	78.788	Tetraodon_nigroviridis
ENSPMEG00000001717	-	100	79.798	ENSXMAG00000003130	sar1ab	100	79.798	Xiphophorus_maculatus
ENSPMEG00000001717	-	100	98.990	ENSXMAG00000026223	SAR1A	100	98.990	Xiphophorus_maculatus