EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSPMEG00000001775 (Gene tree)
Gene ID: 106904627
Gene Symbol: ddx56
Alias: -
Full Name: DEAD-box helicase 56
Gene Type: protein_coding
Species: Poecilia_mexicana
Status: putative
Strand: Minus strand
Length: 12867 bases
Position: chrKQ552974.1:68887-81753
Accession: 106904627
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSPMEP00000000896	ResIII	PF04851.15	7.4e-09	1	1
ENSPMEP00000000908	ResIII	PF04851.15	8.6e-09	1	1
ENSPMEP00000000896	DEAD	PF00270.29	8.7e-40	1	1
ENSPMEP00000000908	DEAD	PF00270.29	9.9e-40	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSPMET00000015092	-	1733	XM_014969046	ENSPMEP00000000908	558 (aa)	XP_014824532	UPI00072E34DB
ENSPMET00000015106	-	1590	-	ENSPMEP00000000896	529 (aa)	-	-

Gene Model

Click here to download ENSPMEG00000001775's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSPMEG00000001775's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSPMEG00000001775	ddx56	78	30.569	ENSPMEG00000016243	ddx49	79	30.879
ENSPMEG00000001775	ddx56	81	31.148	ENSPMEG00000018616	ddx47	77	31.148
ENSPMEG00000001775	ddx56	76	30.676	ENSPMEG00000002359	ddx52	57	30.918

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSPMEG00000001775	ddx56	97	64.909	ENSG00000136271	DDX56	98	68.508	Homo_sapiens
ENSPMEG00000001775	ddx56	100	85.740	ENSAPOG00000017113	ddx56	100	85.027	Acanthochromis_polyacanthus
ENSPMEG00000001775	ddx56	97	63.806	ENSAMEG00000017711	DDX56	97	63.254	Ailuropoda_melanoleuca
ENSPMEG00000001775	ddx56	95	73.684	ENSACIG00000013747	ddx56	99	89.011	Amphilophus_citrinellus
ENSPMEG00000001775	ddx56	95	86.523	ENSAOCG00000018059	ddx56	96	85.910	Amphiprion_ocellaris
ENSPMEG00000001775	ddx56	91	88.115	ENSAOCG00000015447	-	87	87.885	Amphiprion_ocellaris
ENSPMEG00000001775	ddx56	100	84.946	ENSAPEG00000007267	ddx56	100	84.946	Amphiprion_percula
ENSPMEG00000001775	ddx56	99	82.975	ENSATEG00000005279	ddx56	99	82.975	Anabas_testudineus
ENSPMEG00000001775	ddx56	100	82.321	ENSACLG00000020113	ddx56	100	82.143	Astatotilapia_calliptera
ENSPMEG00000001775	ddx56	99	74.865	ENSAMXG00000019357	ddx56	99	74.686	Astyanax_mexicanus
ENSPMEG00000001775	ddx56	97	64.899	ENSBTAG00000010602	DDX56	97	65.018	Bos_taurus
ENSPMEG00000001775	ddx56	97	39.785	WBGene00016073	C24H12.4	86	39.785	Caenorhabditis_elegans
ENSPMEG00000001775	ddx56	97	64.909	ENSCJAG00000012233	DDX56	99	63.455	Callithrix_jacchus
ENSPMEG00000001775	ddx56	80	61.136	ENSCAFG00000029295	DDX56	98	61.419	Canis_familiaris
ENSPMEG00000001775	ddx56	97	64.259	ENSCAFG00020019695	DDX56	97	64.259	Canis_lupus_dingo
ENSPMEG00000001775	ddx56	97	65.082	ENSCHIG00000014261	DDX56	98	63.838	Capra_hircus
ENSPMEG00000001775	ddx56	97	64.899	ENSTSYG00000008048	DDX56	97	64.835	Carlito_syrichta
ENSPMEG00000001775	ddx56	85	64.059	ENSCAPG00000006286	DDX56	99	62.633	Cavia_aperea
ENSPMEG00000001775	ddx56	97	65.751	ENSCPOG00000003359	DDX56	99	64.522	Cavia_porcellus
ENSPMEG00000001775	ddx56	99	63.273	ENSCCAG00000025303	DDX56	99	63.091	Cebus_capucinus
ENSPMEG00000001775	ddx56	97	64.416	ENSCATG00000039389	DDX56	97	63.985	Cercocebus_atys
ENSPMEG00000001775	ddx56	99	64.781	ENSCLAG00000007666	DDX56	99	64.781	Chinchilla_lanigera
ENSPMEG00000001775	ddx56	97	64.727	ENSCSAG00000015636	DDX56	97	64.299	Chlorocebus_sabaeus
ENSPMEG00000001775	ddx56	99	69.410	ENSCPBG00000024556	DDX56	99	69.410	Chrysemys_picta_bellii
ENSPMEG00000001775	ddx56	93	60.800	ENSCING00000005185	-	98	61.024	Ciona_intestinalis
ENSPMEG00000001775	ddx56	93	60.600	ENSCSAVG00000011266	-	99	60.878	Ciona_savignyi
ENSPMEG00000001775	ddx56	97	64.299	ENSCANG00000028187	DDX56	97	64.299	Colobus_angolensis_palliatus
ENSPMEG00000001775	ddx56	97	65.751	ENSCGRG00001019019	Ddx56	98	65.242	Cricetulus_griseus_chok1gshd
ENSPMEG00000001775	ddx56	97	65.751	ENSCGRG00000011870	Ddx56	98	65.242	Cricetulus_griseus_crigri
ENSPMEG00000001775	ddx56	100	80.927	ENSCSEG00000008368	ddx56	100	81.283	Cynoglossus_semilaevis
ENSPMEG00000001775	ddx56	100	92.294	ENSCVAG00000006499	ddx56	100	92.294	Cyprinodon_variegatus
ENSPMEG00000001775	ddx56	99	79.856	ENSDARG00000020913	ddx56	99	80.036	Danio_rerio
ENSPMEG00000001775	ddx56	85	63.425	ENSDNOG00000036526	DDX56	96	63.283	Dasypus_novemcinctus
ENSPMEG00000001775	ddx56	97	50.091	FBgn0001565	Hlc	96	50.091	Drosophila_melanogaster
ENSPMEG00000001775	ddx56	89	43.816	ENSETEG00000019559	-	100	44.025	Echinops_telfairi
ENSPMEG00000001775	ddx56	67	76.389	ENSETEG00000002969	-	64	76.389	Echinops_telfairi
ENSPMEG00000001775	ddx56	97	66.545	ENSEBUG00000009986	ddx56	98	66.000	Eptatretus_burgeri
ENSPMEG00000001775	ddx56	97	63.985	ENSEASG00005017795	DDX56	97	63.985	Equus_asinus_asinus
ENSPMEG00000001775	ddx56	97	63.803	ENSECAG00000019897	DDX56	97	63.803	Equus_caballus
ENSPMEG00000001775	ddx56	84	63.347	ENSEEUG00000004849	DDX56	97	62.500	Erinaceus_europaeus
ENSPMEG00000001775	ddx56	100	81.183	ENSELUG00000004150	ddx56	100	81.183	Esox_lucius
ENSPMEG00000001775	ddx56	97	63.738	ENSFCAG00000010261	DDX56	97	63.553	Felis_catus
ENSPMEG00000001775	ddx56	99	63.971	ENSFDAG00000007128	DDX56	98	63.787	Fukomys_damarensis
ENSPMEG00000001775	ddx56	100	89.054	ENSFHEG00000018008	ddx56	96	93.159	Fundulus_heteroclitus
ENSPMEG00000001775	ddx56	100	91.304	ENSGAFG00000006906	ddx56	99	91.304	Gambusia_affinis
ENSPMEG00000001775	ddx56	92	73.834	ENSGAGG00000006789	DDX56	91	72.461	Gopherus_agassizii
ENSPMEG00000001775	ddx56	97	64.909	ENSGGOG00000012031	DDX56	97	64.481	Gorilla_gorilla
ENSPMEG00000001775	ddx56	95	78.424	ENSHBUG00000015246	ddx56	96	78.236	Haplochromis_burtoni
ENSPMEG00000001775	ddx56	99	63.262	ENSHGLG00000017271	DDX56	99	62.956	Heterocephalus_glaber_female
ENSPMEG00000001775	ddx56	99	63.262	ENSHGLG00100015731	DDX56	99	62.956	Heterocephalus_glaber_male
ENSPMEG00000001775	ddx56	99	81.622	ENSHCOG00000001685	ddx56	99	81.261	Hippocampus_comes
ENSPMEG00000001775	ddx56	99	75.224	ENSIPUG00000006602	ddx56	98	75.404	Ictalurus_punctatus
ENSPMEG00000001775	ddx56	97	64.552	ENSSTOG00000000464	DDX56	97	64.179	Ictidomys_tridecemlineatus
ENSPMEG00000001775	ddx56	97	64.286	ENSJJAG00000014269	Ddx56	98	63.919	Jaculus_jaculus
ENSPMEG00000001775	ddx56	100	87.389	ENSKMAG00000016611	ddx56	99	86.856	Kryptolebias_marmoratus
ENSPMEG00000001775	ddx56	99	83.721	ENSLBEG00000026281	ddx56	100	82.826	Labrus_bergylta
ENSPMEG00000001775	ddx56	98	71.869	ENSLACG00000015551	DDX56	97	72.464	Latimeria_chalumnae
ENSPMEG00000001775	ddx56	99	78.597	ENSLOCG00000015185	ddx56	98	78.597	Lepisosteus_oculatus
ENSPMEG00000001775	ddx56	98	64.973	ENSLAFG00000018206	DDX56	98	64.791	Loxodonta_africana
ENSPMEG00000001775	ddx56	97	64.599	ENSMFAG00000041001	DDX56	97	64.168	Macaca_fascicularis
ENSPMEG00000001775	ddx56	97	64.599	ENSMMUG00000002645	DDX56	97	64.168	Macaca_mulatta
ENSPMEG00000001775	ddx56	97	64.599	ENSMNEG00000028492	DDX56	97	64.168	Macaca_nemestrina
ENSPMEG00000001775	ddx56	97	64.599	ENSMLEG00000043591	DDX56	97	64.168	Mandrillus_leucophaeus
ENSPMEG00000001775	ddx56	100	82.679	ENSMAMG00000007776	ddx56	99	82.796	Mastacembelus_armatus
ENSPMEG00000001775	ddx56	100	82.321	ENSMZEG00005009813	ddx56	100	82.143	Maylandia_zebra
ENSPMEG00000001775	ddx56	97	65.082	ENSMICG00000005550	DDX56	99	64.195	Microcebus_murinus
ENSPMEG00000001775	ddx56	97	63.736	ENSMOCG00000016782	Ddx56	97	63.553	Microtus_ochrogaster
ENSPMEG00000001775	ddx56	100	82.682	ENSMMOG00000009654	ddx56	100	82.495	Mola_mola
ENSPMEG00000001775	ddx56	98	60.799	ENSMODG00000016137	DDX56	97	60.436	Monodelphis_domestica
ENSPMEG00000001775	ddx56	71	78.272	ENSMALG00000016910	ddx56	99	78.272	Monopterus_albus
ENSPMEG00000001775	ddx56	99	63.110	MGP_CAROLIEiJ_G0016069	Ddx56	98	67.742	Mus_caroli
ENSPMEG00000001775	ddx56	99	62.749	ENSMUSG00000004393	Ddx56	98	68.145	Mus_musculus
ENSPMEG00000001775	ddx56	97	63.553	MGP_PahariEiJ_G0016822	Ddx56	98	67.742	Mus_pahari
ENSPMEG00000001775	ddx56	99	62.749	MGP_SPRETEiJ_G0016911	Ddx56	98	68.145	Mus_spretus
ENSPMEG00000001775	ddx56	97	63.437	ENSMPUG00000018196	DDX56	86	62.888	Mustela_putorius_furo
ENSPMEG00000001775	ddx56	97	63.738	ENSMLUG00000003509	DDX56	97	63.919	Myotis_lucifugus
ENSPMEG00000001775	ddx56	99	65.280	ENSNGAG00000018785	Ddx56	99	65.099	Nannospalax_galili
ENSPMEG00000001775	ddx56	95	79.473	ENSNBRG00000002656	ddx56	96	79.473	Neolamprologus_brichardi
ENSPMEG00000001775	ddx56	98	65.045	ENSNLEG00000003816	DDX56	98	64.621	Nomascus_leucogenys
ENSPMEG00000001775	ddx56	93	62.048	ENSMEUG00000006788	DDX56	99	61.647	Notamacropus_eugenii
ENSPMEG00000001775	ddx56	98	62.500	ENSOPRG00000000292	-	98	62.319	Ochotona_princeps
ENSPMEG00000001775	ddx56	71	68.085	ENSODEG00000014807	DDX56	99	68.085	Octodon_degus
ENSPMEG00000001775	ddx56	100	80.108	ENSONIG00000011509	ddx56	99	80.108	Oreochromis_niloticus
ENSPMEG00000001775	ddx56	76	57.740	ENSOANG00000015987	-	94	57.740	Ornithorhynchus_anatinus
ENSPMEG00000001775	ddx56	52	66.058	ENSOANG00000010592	-	99	66.058	Ornithorhynchus_anatinus
ENSPMEG00000001775	ddx56	96	57.699	ENSOANG00000006320	-	99	57.885	Ornithorhynchus_anatinus
ENSPMEG00000001775	ddx56	98	64.195	ENSOCUG00000022918	DDX56	98	64.260	Oryctolagus_cuniculus
ENSPMEG00000001775	ddx56	100	85.868	ENSORLG00000001434	ddx56	100	85.868	Oryzias_latipes
ENSPMEG00000001775	ddx56	100	85.689	ENSORLG00020015718	ddx56	97	85.689	Oryzias_latipes_hni
ENSPMEG00000001775	ddx56	99	85.842	ENSORLG00015003004	ddx56	96	85.842	Oryzias_latipes_hsok
ENSPMEG00000001775	ddx56	100	85.484	ENSOMEG00000022072	ddx56	99	85.484	Oryzias_melastigma
ENSPMEG00000001775	ddx56	97	64.234	ENSOGAG00000009981	DDX56	97	64.234	Otolemur_garnettii
ENSPMEG00000001775	ddx56	97	65.265	ENSOARG00000015240	DDX56	97	65.018	Ovis_aries
ENSPMEG00000001775	ddx56	99	52.753	ENSPPAG00000031263	-	99	52.398	Pan_paniscus
ENSPMEG00000001775	ddx56	97	62.254	ENSPPAG00000029147	DDX56	97	61.828	Pan_paniscus
ENSPMEG00000001775	ddx56	97	63.736	ENSPPRG00000014594	DDX56	97	63.553	Panthera_pardus
ENSPMEG00000001775	ddx56	94	56.144	ENSPTIG00000019500	DDX56	97	55.955	Panthera_tigris_altaica
ENSPMEG00000001775	ddx56	94	52.523	ENSPTRG00000052765	-	99	53.458	Pan_troglodytes
ENSPMEG00000001775	ddx56	97	64.909	ENSPTRG00000019147	DDX56	97	64.481	Pan_troglodytes
ENSPMEG00000001775	ddx56	97	64.234	ENSPANG00000002446	DDX56	97	63.803	Papio_anubis
ENSPMEG00000001775	ddx56	100	76.882	ENSPKIG00000018998	ddx56	99	76.882	Paramormyrops_kingsleyae
ENSPMEG00000001775	ddx56	98	82.218	ENSPMGG00000017421	ddx56	99	83.992	Periophthalmus_magnuspinnatus
ENSPMEG00000001775	ddx56	98	66.667	ENSPCIG00000009336	DDX56	97	66.302	Phascolarctos_cinereus
ENSPMEG00000001775	ddx56	100	99.821	ENSPFOG00000018658	ddx56	100	99.821	Poecilia_formosa
ENSPMEG00000001775	ddx56	100	99.642	ENSPLAG00000019208	ddx56	100	99.642	Poecilia_latipinna
ENSPMEG00000001775	ddx56	100	97.849	ENSPREG00000015142	ddx56	100	97.849	Poecilia_reticulata
ENSPMEG00000001775	ddx56	97	64.909	ENSPPYG00000017591	DDX56	97	64.481	Pongo_abelii
ENSPMEG00000001775	ddx56	97	64.404	ENSPCAG00000011499	DDX56	99	63.971	Procavia_capensis
ENSPMEG00000001775	ddx56	97	64.835	ENSPCOG00000024864	DDX56	97	64.469	Propithecus_coquereli
ENSPMEG00000001775	ddx56	86	69.668	ENSPVAG00000000791	DDX56	85	69.668	Pteropus_vampyrus
ENSPMEG00000001775	ddx56	100	82.143	ENSPNYG00000019212	ddx56	100	81.964	Pundamilia_nyererei
ENSPMEG00000001775	ddx56	99	78.947	ENSPNAG00000025446	ddx56	99	79.135	Pygocentrus_nattereri
ENSPMEG00000001775	ddx56	97	63.985	ENSRNOG00000004670	Ddx56	97	63.736	Rattus_norvegicus
ENSPMEG00000001775	ddx56	97	64.727	ENSRBIG00000030140	DDX56	97	64.299	Rhinopithecus_bieti
ENSPMEG00000001775	ddx56	97	64.545	ENSRROG00000044428	DDX56	97	64.117	Rhinopithecus_roxellana
ENSPMEG00000001775	ddx56	98	43.958	YLR276C	-	96	43.684	Saccharomyces_cerevisiae
ENSPMEG00000001775	ddx56	97	64.545	ENSSBOG00000034339	DDX56	99	63.091	Saimiri_boliviensis_boliviensis
ENSPMEG00000001775	ddx56	85	65.833	ENSSHAG00000016615	DDX56	98	65.481	Sarcophilus_harrisii
ENSPMEG00000001775	ddx56	100	76.649	ENSSFOG00015012795	ddx56	100	76.250	Scleropages_formosus
ENSPMEG00000001775	ddx56	100	82.948	ENSSMAG00000011280	ddx56	99	85.075	Scophthalmus_maximus
ENSPMEG00000001775	ddx56	100	84.520	ENSSDUG00000023597	ddx56	100	83.986	Seriola_dumerili
ENSPMEG00000001775	ddx56	100	84.342	ENSSLDG00000018369	ddx56	100	83.808	Seriola_lalandi_dorsalis
ENSPMEG00000001775	ddx56	70	77.586	ENSSARG00000014363	DDX56	77	72.464	Sorex_araneus
ENSPMEG00000001775	ddx56	98	72.381	ENSSPUG00000000784	DDX56	95	71.818	Sphenodon_punctatus
ENSPMEG00000001775	ddx56	95	87.640	ENSSPAG00000009392	ddx56	99	86.891	Stegastes_partitus
ENSPMEG00000001775	ddx56	98	63.768	ENSSSCG00000016745	DDX56	98	64.286	Sus_scrofa
ENSPMEG00000001775	ddx56	100	81.738	ENSTRUG00000018623	ddx56	100	81.028	Takifugu_rubripes
ENSPMEG00000001775	ddx56	100	81.338	ENSTNIG00000013593	ddx56	100	80.986	Tetraodon_nigroviridis
ENSPMEG00000001775	ddx56	99	63.964	ENSTBEG00000007119	DDX56	98	63.604	Tupaia_belangeri
ENSPMEG00000001775	ddx56	83	63.420	ENSTTRG00000010552	DDX56	97	63.124	Tursiops_truncatus
ENSPMEG00000001775	ddx56	97	63.993	ENSUAMG00000014194	DDX56	97	63.437	Ursus_americanus
ENSPMEG00000001775	ddx56	97	63.993	ENSUMAG00000009666	DDX56	97	63.437	Ursus_maritimus
ENSPMEG00000001775	ddx56	93	66.600	ENSVVUG00000011905	DDX56	97	63.071	Vulpes_vulpes
ENSPMEG00000001775	ddx56	99	72.152	ENSXETG00000019000	ddx56	99	72.152	Xenopus_tropicalis
ENSPMEG00000001775	ddx56	100	94.030	ENSXCOG00000017413	ddx56	99	94.030	Xiphophorus_couchianus
ENSPMEG00000001775	ddx56	100	97.312	ENSXMAG00000018749	ddx56	100	97.312	Xiphophorus_maculatus