EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSPMEG00000001815 (Gene tree)
Gene ID: 106933047
Gene Symbol: -
Alias: -
Full Name: SWI/SNF related%2C matrix associated%2C actin dependent regulator of chromatin%2C subfamily a%2C member 2
Gene Type: protein_coding
Species: Poecilia_mexicana
Status: putative
Strand: Plus strand
Length: 55796 bases
Position: chrKQ552557.1:71398-127193
Accession: 106933047
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSPMEP00000000900	ResIII	PF04851.15	2.7e-07	1	1
ENSPMEP00000000911	ResIII	PF04851.15	2.7e-07	1	1
ENSPMEP00000000920	ResIII	PF04851.15	2.8e-07	1	1
ENSPMEP00000021504	ResIII	PF04851.15	2.8e-07	1	1
ENSPMEP00000021510	ResIII	PF04851.15	2.8e-07	1	1
ENSPMEP00000021516	ResIII	PF04851.15	2.8e-07	1	1
ENSPMEP00000000911	BRK	PF07533.16	2.1e-17	1	1
ENSPMEP00000000920	BRK	PF07533.16	2.1e-17	1	1
ENSPMEP00000021504	BRK	PF07533.16	2.1e-17	1	1
ENSPMEP00000021510	BRK	PF07533.16	2.1e-17	1	1
ENSPMEP00000021516	BRK	PF07533.16	2.1e-17	1	1
ENSPMEP00000000900	BRK	PF07533.16	5.3e-13	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSPMET00000015072	-	8956	-	ENSPMEP00000000920	1623 (aa)	-	-
ENSPMET00000015095	-	8449	-	ENSPMEP00000000911	1602 (aa)	-	UPI00072ED47D
ENSPMET00000015078	-	8956	XM_015012075	ENSPMEP00000021504	1623 (aa)	XP_014867561	-
ENSPMET00000015110	-	4587	-	ENSPMEP00000000900	1528 (aa)	-	-
ENSPMET00000015047	-	8956	-	ENSPMEP00000021516	1623 (aa)	-	-
ENSPMET00000015056	-	8956	-	ENSPMEP00000021510	1623 (aa)	-	-

Gene Model

Click here to download ENSPMEG00000001815's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSPMEG00000001815's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSPMEG00000001815	-	88	76.386	ENSPMEG00000003725	smarca4a	97	72.383
ENSPMEG00000001815	-	94	69.312	ENSPMEG00000008929	-	98	71.171

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSPMEG00000001815	-	97	76.240	ENSG00000080503	SMARCA2	99	98.000	Homo_sapiens
ENSPMEG00000001815	-	99	91.391	ENSAPOG00000002641	SMARCA2	99	91.145	Acanthochromis_polyacanthus
ENSPMEG00000001815	-	88	77.235	ENSAMEG00000012325	SMARCA2	98	85.669	Ailuropoda_melanoleuca
ENSPMEG00000001815	-	99	87.990	ENSACIG00000015607	SMARCA2	99	88.133	Amphilophus_citrinellus
ENSPMEG00000001815	-	99	91.708	ENSAOCG00000009647	-	99	91.524	Amphiprion_ocellaris
ENSPMEG00000001815	-	99	91.329	ENSAPEG00000007646	SMARCA2	99	91.335	Amphiprion_percula
ENSPMEG00000001815	-	99	91.530	ENSATEG00000006916	SMARCA2	99	91.291	Anabas_testudineus
ENSPMEG00000001815	-	87	78.245	ENSAPLG00000013873	SMARCA2	93	77.762	Anas_platyrhynchos
ENSPMEG00000001815	-	97	78.680	ENSACAG00000002423	SMARCA2	99	78.316	Anolis_carolinensis
ENSPMEG00000001815	-	97	77.644	ENSANAG00000026498	SMARCA2	99	80.139	Aotus_nancymaae
ENSPMEG00000001815	-	99	87.245	ENSACLG00000004248	SMARCA2	99	88.931	Astatotilapia_calliptera
ENSPMEG00000001815	-	99	84.365	ENSAMXG00000012404	smarca2	99	84.000	Astyanax_mexicanus
ENSPMEG00000001815	-	97	77.082	ENSBTAG00000007494	SMARCA2	99	79.397	Bos_taurus
ENSPMEG00000001815	-	97	78.911	ENSCJAG00000010710	SMARCA2	99	80.389	Callithrix_jacchus
ENSPMEG00000001815	-	97	76.834	ENSCAFG00000002013	SMARCA2	99	79.760	Canis_familiaris
ENSPMEG00000001815	-	73	87.356	ENSCAFG00020026802	SMARCA2	94	87.356	Canis_lupus_dingo
ENSPMEG00000001815	-	97	77.226	ENSCHIG00000025863	SMARCA2	99	79.397	Capra_hircus
ENSPMEG00000001815	-	97	76.354	ENSTSYG00000003858	SMARCA2	99	80.706	Carlito_syrichta
ENSPMEG00000001815	-	97	76.209	ENSCAPG00000002890	SMARCA2	99	77.311	Cavia_aperea
ENSPMEG00000001815	-	97	76.585	ENSCPOG00000005475	SMARCA2	99	79.773	Cavia_porcellus
ENSPMEG00000001815	-	97	78.151	ENSCCAG00000030636	SMARCA2	99	80.328	Cebus_capucinus
ENSPMEG00000001815	-	97	76.604	ENSCATG00000031470	SMARCA2	99	80.038	Cercocebus_atys
ENSPMEG00000001815	-	82	82.795	ENSCLAG00000014484	SMARCA2	99	80.076	Chinchilla_lanigera
ENSPMEG00000001815	-	91	77.724	ENSCSAG00000008650	SMARCA2	99	80.956	Chlorocebus_sabaeus
ENSPMEG00000001815	-	84	81.969	ENSCHOG00000004316	SMARCA2	86	81.969	Choloepus_hoffmanni
ENSPMEG00000001815	-	95	82.612	ENSCPBG00000025463	SMARCA2	98	83.610	Chrysemys_picta_bellii
ENSPMEG00000001815	-	97	76.297	ENSCANG00000039597	SMARCA2	99	80.454	Colobus_angolensis_palliatus
ENSPMEG00000001815	-	97	72.438	ENSCGRG00001002323	Smarca2	99	73.383	Cricetulus_griseus_chok1gshd
ENSPMEG00000001815	-	99	84.270	ENSCSEG00000019311	SMARCA2	99	83.772	Cynoglossus_semilaevis
ENSPMEG00000001815	-	84	88.485	ENSCVAG00000016571	SMARCA2	98	88.485	Cyprinodon_variegatus
ENSPMEG00000001815	-	99	82.776	ENSDARG00000008904	smarca2	99	82.601	Danio_rerio
ENSPMEG00000001815	-	97	79.350	ENSDNOG00000006402	SMARCA2	99	80.340	Dasypus_novemcinctus
ENSPMEG00000001815	-	97	77.052	ENSDORG00000014832	Smarca2	99	79.899	Dipodomys_ordii
ENSPMEG00000001815	-	77	60.974	FBgn0000212	brm	83	57.442	Drosophila_melanogaster
ENSPMEG00000001815	-	87	59.789	ENSEBUG00000002449	-	95	61.417	Eptatretus_burgeri
ENSPMEG00000001815	-	94	70.041	ENSEBUG00000011442	-	97	68.421	Eptatretus_burgeri
ENSPMEG00000001815	-	97	76.774	ENSEASG00005010312	SMARCA2	99	79.634	Equus_asinus_asinus
ENSPMEG00000001815	-	60	91.176	ENSEEUG00000015540	-	69	78.378	Erinaceus_europaeus
ENSPMEG00000001815	-	95	82.025	ENSELUG00000010318	smarca2	99	80.662	Esox_lucius
ENSPMEG00000001815	-	97	76.641	ENSFCAG00000001568	SMARCA2	99	79.760	Felis_catus
ENSPMEG00000001815	-	97	79.670	ENSFALG00000010416	SMARCA2	98	81.220	Ficedula_albicollis
ENSPMEG00000001815	-	97	75.802	ENSFDAG00000010502	SMARCA2	99	79.125	Fukomys_damarensis
ENSPMEG00000001815	-	99	95.815	ENSFHEG00000021250	SMARCA2	99	95.754	Fundulus_heteroclitus
ENSPMEG00000001815	-	99	81.203	ENSGMOG00000014229	SMARCA2	99	80.764	Gadus_morhua
ENSPMEG00000001815	-	97	79.733	ENSGALG00000010164	SMARCA2	99	79.774	Gallus_gallus
ENSPMEG00000001815	-	98	89.279	ENSGAFG00000001164	SMARCA2	98	89.279	Gambusia_affinis
ENSPMEG00000001815	-	99	86.566	ENSGACG00000014488	SMARCA2	99	86.190	Gasterosteus_aculeatus
ENSPMEG00000001815	-	97	78.401	ENSGAGG00000024412	SMARCA2	99	79.384	Gopherus_agassizii
ENSPMEG00000001815	-	88	85.726	ENSGGOG00000000513	SMARCA2	98	80.669	Gorilla_gorilla
ENSPMEG00000001815	-	99	90.399	ENSHBUG00000006691	SMARCA2	99	90.708	Haplochromis_burtoni
ENSPMEG00000001815	-	97	76.111	ENSHGLG00000005215	SMARCA2	99	79.575	Heterocephalus_glaber_female
ENSPMEG00000001815	-	97	78.776	ENSHGLG00100010496	SMARCA2	99	79.760	Heterocephalus_glaber_male
ENSPMEG00000001815	-	90	80.614	ENSHCOG00000015348	-	97	85.339	Hippocampus_comes
ENSPMEG00000001815	-	99	83.114	ENSIPUG00000011060	smarca2	98	82.519	Ictalurus_punctatus
ENSPMEG00000001815	-	97	77.112	ENSSTOG00000006812	SMARCA2	99	80.391	Ictidomys_tridecemlineatus
ENSPMEG00000001815	-	97	76.923	ENSJJAG00000010867	Smarca2	99	79.209	Jaculus_jaculus
ENSPMEG00000001815	-	99	93.022	ENSKMAG00000015844	-	99	93.047	Kryptolebias_marmoratus
ENSPMEG00000001815	-	98	81.835	ENSLOCG00000011499	smarca2	99	81.716	Lepisosteus_oculatus
ENSPMEG00000001815	-	97	79.172	ENSLAFG00000014061	SMARCA2	99	80.025	Loxodonta_africana
ENSPMEG00000001815	-	97	76.041	ENSMFAG00000003814	SMARCA2	99	79.043	Macaca_fascicularis
ENSPMEG00000001815	-	97	76.184	ENSMMUG00000015279	SMARCA2	99	80.391	Macaca_mulatta
ENSPMEG00000001815	-	97	76.710	ENSMNEG00000041069	SMARCA2	99	80.176	Macaca_nemestrina
ENSPMEG00000001815	-	90	85.544	ENSMLEG00000027418	SMARCA2	95	86.974	Mandrillus_leucophaeus
ENSPMEG00000001815	-	99	91.848	ENSMAMG00000003056	SMARCA2	99	92.045	Mastacembelus_armatus
ENSPMEG00000001815	-	99	90.524	ENSMZEG00005020709	SMARCA2	99	90.834	Maylandia_zebra
ENSPMEG00000001815	-	74	68.792	ENSMGAG00000005160	-	100	67.995	Meleagris_gallopavo
ENSPMEG00000001815	-	97	77.258	ENSMICG00000005162	SMARCA2	99	80.076	Microcebus_murinus
ENSPMEG00000001815	-	97	77.440	ENSMOCG00000001611	Smarca2	99	79.660	Microtus_ochrogaster
ENSPMEG00000001815	-	99	84.197	ENSMMOG00000014196	SMARCA2	99	84.481	Mola_mola
ENSPMEG00000001815	-	97	79.494	ENSMODG00000003578	SMARCA2	99	80.138	Monodelphis_domestica
ENSPMEG00000001815	-	99	88.987	ENSMALG00000009611	SMARCA2	99	89.230	Monopterus_albus
ENSPMEG00000001815	-	81	84.586	MGP_CAROLIEiJ_G0022841	Smarca2	99	79.912	Mus_caroli
ENSPMEG00000001815	-	81	84.433	ENSMUSG00000024921	Smarca2	99	98.000	Mus_musculus
ENSPMEG00000001815	-	96	77.720	MGP_PahariEiJ_G0014334	Smarca2	99	79.423	Mus_pahari
ENSPMEG00000001815	-	81	84.356	MGP_SPRETEiJ_G0023759	Smarca2	97	87.879	Mus_spretus
ENSPMEG00000001815	-	78	84.711	ENSMPUG00000005171	SMARCA2	93	85.465	Mustela_putorius_furo
ENSPMEG00000001815	-	97	75.934	ENSMLUG00000002342	SMARCA2	99	76.662	Myotis_lucifugus
ENSPMEG00000001815	-	97	78.517	ENSNGAG00000000108	Smarca2	99	78.741	Nannospalax_galili
ENSPMEG00000001815	-	95	76.471	ENSNBRG00000017998	SMARCA2	94	82.587	Neolamprologus_brichardi
ENSPMEG00000001815	-	91	84.646	ENSNLEG00000008575	SMARCA2	99	77.993	Nomascus_leucogenys
ENSPMEG00000001815	-	93	73.977	ENSMEUG00000009812	SMARCA2	99	72.354	Notamacropus_eugenii
ENSPMEG00000001815	-	79	80.851	ENSOPRG00000013474	SMARCA2	99	76.008	Ochotona_princeps
ENSPMEG00000001815	-	80	84.000	ENSODEG00000005452	SMARCA2	99	78.226	Octodon_degus
ENSPMEG00000001815	-	99	90.960	ENSONIG00000014163	SMARCA2	99	90.835	Oreochromis_niloticus
ENSPMEG00000001815	-	78	86.076	ENSOCUG00000006320	SMARCA2	99	78.898	Oryctolagus_cuniculus
ENSPMEG00000001815	-	99	89.832	ENSORLG00000020820	SMARCA2	99	90.443	Oryzias_latipes
ENSPMEG00000001815	-	99	89.894	ENSORLG00015006289	SMARCA2	99	90.506	Oryzias_latipes_hsok
ENSPMEG00000001815	-	99	89.819	ENSOMEG00000009736	-	99	89.797	Oryzias_melastigma
ENSPMEG00000001815	-	79	85.083	ENSOGAG00000017053	SMARCA2	99	79.146	Otolemur_garnettii
ENSPMEG00000001815	-	97	78.535	ENSOARG00000013265	SMARCA2	99	78.634	Ovis_aries
ENSPMEG00000001815	-	89	85.669	ENSPPAG00000038717	SMARCA2	97	85.931	Pan_paniscus
ENSPMEG00000001815	-	97	76.705	ENSPPRG00000001879	SMARCA2	99	79.823	Panthera_pardus
ENSPMEG00000001815	-	97	78.776	ENSPTRG00000051168	SMARCA2	99	79.736	Pan_troglodytes
ENSPMEG00000001815	-	97	75.445	ENSPANG00000025121	SMARCA2	99	75.271	Papio_anubis
ENSPMEG00000001815	-	99	82.763	ENSPKIG00000018469	-	99	82.513	Paramormyrops_kingsleyae
ENSPMEG00000001815	-	97	77.911	ENSPSIG00000006284	SMARCA2	99	78.984	Pelodiscus_sinensis
ENSPMEG00000001815	-	99	82.123	ENSPMGG00000013696	-	99	81.948	Periophthalmus_magnuspinnatus
ENSPMEG00000001815	-	97	76.774	ENSPEMG00000019821	Smarca2	99	79.156	Peromyscus_maniculatus_bairdii
ENSPMEG00000001815	-	95	70.101	ENSPMAG00000005337	-	97	69.313	Petromyzon_marinus
ENSPMEG00000001815	-	97	79.177	ENSPCIG00000015658	SMARCA2	99	79.950	Phascolarctos_cinereus
ENSPMEG00000001815	-	99	99.688	ENSPFOG00000001856	SMARCA2	100	99.688	Poecilia_formosa
ENSPMEG00000001815	-	99	99.568	ENSPLAG00000017829	SMARCA2	99	99.568	Poecilia_latipinna
ENSPMEG00000001815	-	99	98.939	ENSPREG00000013800	SMARCA2	100	98.939	Poecilia_reticulata
ENSPMEG00000001815	-	97	76.418	ENSPPYG00000019258	SMARCA2	99	79.887	Pongo_abelii
ENSPMEG00000001815	-	77	75.000	ENSPCAG00000016969	SMARCA2	76	75.000	Procavia_capensis
ENSPMEG00000001815	-	97	75.372	ENSPCOG00000025709	SMARCA2	99	78.247	Propithecus_coquereli
ENSPMEG00000001815	-	90	79.421	ENSPVAG00000000901	SMARCA2	92	80.781	Pteropus_vampyrus
ENSPMEG00000001815	-	99	87.808	ENSPNYG00000004533	SMARCA2	99	87.808	Pundamilia_nyererei
ENSPMEG00000001815	-	99	84.731	ENSPNAG00000014635	smarca2	98	84.928	Pygocentrus_nattereri
ENSPMEG00000001815	-	97	76.160	ENSRNOG00000011931	Smarca2	99	78.794	Rattus_norvegicus
ENSPMEG00000001815	-	97	76.838	ENSRBIG00000038618	SMARCA2	94	86.190	Rhinopithecus_bieti
ENSPMEG00000001815	-	97	77.841	ENSRROG00000019271	SMARCA2	99	80.445	Rhinopithecus_roxellana
ENSPMEG00000001815	-	91	84.676	ENSSBOG00000034827	SMARCA2	95	85.984	Saimiri_boliviensis_boliviensis
ENSPMEG00000001815	-	97	79.607	ENSSHAG00000007884	SMARCA2	99	80.063	Sarcophilus_harrisii
ENSPMEG00000001815	-	91	81.992	ENSSFOG00015014870	SMARCA2	97	82.974	Scleropages_formosus
ENSPMEG00000001815	-	99	89.213	ENSSMAG00000013707	SMARCA2	99	89.937	Scophthalmus_maximus
ENSPMEG00000001815	-	99	90.552	ENSSDUG00000008852	-	99	90.728	Seriola_dumerili
ENSPMEG00000001815	-	99	87.871	ENSSLDG00000025449	SMARCA2	100	86.207	Seriola_lalandi_dorsalis
ENSPMEG00000001815	-	88	82.030	ENSSARG00000007888	SMARCA2	93	78.146	Sorex_araneus
ENSPMEG00000001815	-	95	76.101	ENSSPUG00000001629	SMARCA2	96	77.306	Sphenodon_punctatus
ENSPMEG00000001815	-	99	91.703	ENSSPAG00000020091	-	99	91.588	Stegastes_partitus
ENSPMEG00000001815	-	97	76.759	ENSSSCG00000005232	SMARCA2	99	79.673	Sus_scrofa
ENSPMEG00000001815	-	97	79.161	ENSTGUG00000005460	SMARCA2	99	79.761	Taeniopygia_guttata
ENSPMEG00000001815	-	99	88.037	ENSTRUG00000015619	SMARCA2	99	88.306	Takifugu_rubripes
ENSPMEG00000001815	-	62	97.619	ENSTBEG00000008767	SMARCA2	68	97.619	Tupaia_belangeri
ENSPMEG00000001815	-	93	79.577	ENSTTRG00000002033	SMARCA2	95	79.522	Tursiops_truncatus
ENSPMEG00000001815	-	87	79.370	ENSUAMG00000024701	SMARCA2	99	78.830	Ursus_americanus
ENSPMEG00000001815	-	90	73.411	ENSVPAG00000001204	SMARCA2	98	73.137	Vicugna_pacos
ENSPMEG00000001815	-	72	86.278	ENSVVUG00000004598	SMARCA2	99	84.596	Vulpes_vulpes
ENSPMEG00000001815	-	99	75.919	ENSXETG00000015299	smarca2	99	75.671	Xenopus_tropicalis
ENSPMEG00000001815	-	90	93.343	ENSXCOG00000011073	SMARCA2	99	94.143	Xiphophorus_couchianus
ENSPMEG00000001815	-	99	98.131	ENSXMAG00000015611	SMARCA2	100	98.131	Xiphophorus_maculatus