EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSPMEG00000001952 (Gene tree)
Gene ID: 106919141
Gene Symbol: hdlbpb
Alias: -
Full Name: vigilin-like
Gene Type: protein_coding
Species: Poecilia_mexicana
Status: putative
Strand: Minus strand
Length: 33558 bases
Position: chrKQ551326.1:316964-350521
Accession: 106919141
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSPMEP00000021634	KH_1	PF00013.29	1.6e-188	1	14
ENSPMEP00000021634	KH_1	PF00013.29	1.6e-188	2	14
ENSPMEP00000021634	KH_1	PF00013.29	1.6e-188	3	14
ENSPMEP00000021634	KH_1	PF00013.29	1.6e-188	4	14
ENSPMEP00000021634	KH_1	PF00013.29	1.6e-188	5	14
ENSPMEP00000021634	KH_1	PF00013.29	1.6e-188	6	14
ENSPMEP00000021634	KH_1	PF00013.29	1.6e-188	7	14
ENSPMEP00000021634	KH_1	PF00013.29	1.6e-188	8	14
ENSPMEP00000021634	KH_1	PF00013.29	1.6e-188	9	14
ENSPMEP00000021634	KH_1	PF00013.29	1.6e-188	10	14
ENSPMEP00000021634	KH_1	PF00013.29	1.6e-188	11	14
ENSPMEP00000021634	KH_1	PF00013.29	1.6e-188	12	14
ENSPMEP00000021634	KH_1	PF00013.29	1.6e-188	13	14
ENSPMEP00000021634	KH_1	PF00013.29	1.6e-188	14	14

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSPMET00000014836	-	4459	XM_014989325	ENSPMEP00000021634	1268 (aa)	XP_014844811	UPI00072ED337

Gene Model

Click here to download ENSPMEG00000001952's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSPMEG00000001952's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSPMEG00000001952	hdlbpb	100	70.602	ENSPMEG00000006627	hdlbpa	100	70.446

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSPMEG00000001952	hdlbpb	100	95.820	ENSAPOG00000006904	hdlbpb	100	95.820	Acanthochromis_polyacanthus
ENSPMEG00000001952	hdlbpb	100	90.581	ENSACIG00000016154	hdlbpb	100	90.581	Amphilophus_citrinellus
ENSPMEG00000001952	hdlbpb	100	96.530	ENSAOCG00000004083	hdlbpb	100	96.530	Amphiprion_ocellaris
ENSPMEG00000001952	hdlbpb	100	96.451	ENSAPEG00000012270	hdlbpb	100	96.451	Amphiprion_percula
ENSPMEG00000001952	hdlbpb	100	95.820	ENSATEG00000019877	hdlbpb	100	95.820	Anabas_testudineus
ENSPMEG00000001952	hdlbpb	100	82.098	ENSACAG00000003606	-	100	82.098	Anolis_carolinensis
ENSPMEG00000001952	hdlbpb	100	95.899	ENSACLG00000006618	hdlbpb	100	95.899	Astatotilapia_calliptera
ENSPMEG00000001952	hdlbpb	100	77.857	ENSAMXG00000019946	hdlbpb	100	77.857	Astyanax_mexicanus
ENSPMEG00000001952	hdlbpb	100	94.637	ENSCSEG00000000955	hdlbpb	100	94.637	Cynoglossus_semilaevis
ENSPMEG00000001952	hdlbpb	100	97.634	ENSCVAG00000005345	hdlbpb	100	97.634	Cyprinodon_variegatus
ENSPMEG00000001952	hdlbpb	99	85.793	ENSDARG00000061864	hdlbpb	99	85.793	Danio_rerio
ENSPMEG00000001952	hdlbpb	92	69.744	ENSEBUG00000005304	hdlbpb	96	69.573	Eptatretus_burgeri
ENSPMEG00000001952	hdlbpb	100	67.035	ENSELUG00000019925	hdlbpb	100	78.336	Esox_lucius
ENSPMEG00000001952	hdlbpb	87	34.768	ENSFHEG00000001701	hdlbpb	100	92.823	Fundulus_heteroclitus
ENSPMEG00000001952	hdlbpb	95	87.520	ENSGMOG00000004522	hdlbpb	78	87.520	Gadus_morhua
ENSPMEG00000001952	hdlbpb	100	98.896	ENSGAFG00000005278	hdlbpb	100	98.896	Gambusia_affinis
ENSPMEG00000001952	hdlbpb	99	91.713	ENSGACG00000019361	hdlbpb	100	91.949	Gasterosteus_aculeatus
ENSPMEG00000001952	hdlbpb	100	95.741	ENSHBUG00000018434	hdlbpb	100	95.741	Haplochromis_burtoni
ENSPMEG00000001952	hdlbpb	100	85.354	ENSIPUG00000003291	HDLBP	100	85.876	Ictalurus_punctatus
ENSPMEG00000001952	hdlbpb	100	96.688	ENSKMAG00000016562	hdlbpb	100	96.688	Kryptolebias_marmoratus
ENSPMEG00000001952	hdlbpb	100	95.268	ENSLBEG00000027855	hdlbpb	100	95.268	Labrus_bergylta
ENSPMEG00000001952	hdlbpb	100	84.960	ENSLACG00000007661	hdlbpb	92	84.960	Latimeria_chalumnae
ENSPMEG00000001952	hdlbpb	100	82.664	ENSLOCG00000013909	hdlbpb	100	82.664	Lepisosteus_oculatus
ENSPMEG00000001952	hdlbpb	100	96.136	ENSMAMG00000003035	hdlbpb	100	96.136	Mastacembelus_armatus
ENSPMEG00000001952	hdlbpb	100	95.899	ENSMZEG00005021465	hdlbpb	100	95.899	Maylandia_zebra
ENSPMEG00000001952	hdlbpb	100	94.085	ENSMMOG00000012525	hdlbpb	100	94.401	Mola_mola
ENSPMEG00000001952	hdlbpb	100	93.533	ENSMALG00000008938	hdlbpb	100	93.533	Monopterus_albus
ENSPMEG00000001952	hdlbpb	100	95.978	ENSNBRG00000002236	hdlbpb	100	95.978	Neolamprologus_brichardi
ENSPMEG00000001952	hdlbpb	100	95.741	ENSONIG00000009211	hdlbpb	100	95.741	Oreochromis_niloticus
ENSPMEG00000001952	hdlbpb	100	94.953	ENSORLG00000006581	hdlbpb	100	94.953	Oryzias_latipes
ENSPMEG00000001952	hdlbpb	100	95.032	ENSORLG00020010012	hdlbpb	100	95.032	Oryzias_latipes_hni
ENSPMEG00000001952	hdlbpb	100	95.189	ENSORLG00015006863	hdlbpb	100	95.189	Oryzias_latipes_hsok
ENSPMEG00000001952	hdlbpb	100	95.347	ENSOMEG00000011131	hdlbpb	100	95.347	Oryzias_melastigma
ENSPMEG00000001952	hdlbpb	100	88.486	ENSPKIG00000005966	hdlbpb	100	88.565	Paramormyrops_kingsleyae
ENSPMEG00000001952	hdlbpb	86	94.167	ENSPMGG00000019853	hdlbpb	99	94.167	Periophthalmus_magnuspinnatus
ENSPMEG00000001952	hdlbpb	92	64.570	ENSPMAG00000000249	-	99	64.423	Petromyzon_marinus
ENSPMEG00000001952	hdlbpb	94	74.452	ENSPMAG00000002131	hdlbpb	100	74.452	Petromyzon_marinus
ENSPMEG00000001952	hdlbpb	100	98.674	ENSPFOG00000008755	hdlbpb	100	98.674	Poecilia_formosa
ENSPMEG00000001952	hdlbpb	100	99.763	ENSPLAG00000007055	hdlbpb	100	99.763	Poecilia_latipinna
ENSPMEG00000001952	hdlbpb	100	99.290	ENSPREG00000012848	hdlbpb	100	99.290	Poecilia_reticulata
ENSPMEG00000001952	hdlbpb	100	95.741	ENSPNYG00000022467	hdlbpb	100	95.741	Pundamilia_nyererei
ENSPMEG00000001952	hdlbpb	100	87.461	ENSPNAG00000011104	hdlbpb	100	87.461	Pygocentrus_nattereri
ENSPMEG00000001952	hdlbpb	100	87.697	ENSSFOG00015023199	hdlbpb	100	87.697	Scleropages_formosus
ENSPMEG00000001952	hdlbpb	100	95.584	ENSSMAG00000008790	hdlbpb	100	95.584	Scophthalmus_maximus
ENSPMEG00000001952	hdlbpb	100	96.451	ENSSDUG00000020694	hdlbpb	100	96.451	Seriola_dumerili
ENSPMEG00000001952	hdlbpb	100	95.978	ENSSLDG00000020807	hdlbpb	100	95.978	Seriola_lalandi_dorsalis
ENSPMEG00000001952	hdlbpb	100	82.650	ENSSPUG00000018688	-	100	82.650	Sphenodon_punctatus
ENSPMEG00000001952	hdlbpb	100	96.530	ENSSPAG00000016969	hdlbpb	100	96.530	Stegastes_partitus
ENSPMEG00000001952	hdlbpb	98	92.003	ENSTRUG00000012888	hdlbpb	99	92.003	Takifugu_rubripes
ENSPMEG00000001952	hdlbpb	99	93.109	ENSTNIG00000002555	hdlbpb	100	93.109	Tetraodon_nigroviridis
ENSPMEG00000001952	hdlbpb	100	85.528	ENSXCOG00000001797	hdlbpb	100	85.528	Xiphophorus_couchianus
ENSPMEG00000001952	hdlbpb	100	98.502	ENSXMAG00000015633	hdlbpb	100	98.502	Xiphophorus_maculatus