EuRBPDB

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  • Description
  • RBDs
  • Transcripts
  • Gene Model
  • PPI
  • Paralogs
  • Orthologs
Description
Ensembl ID
ENSPMEG00000002071 (Gene tree)
Gene ID
106919136
Gene Symbol
polr2a
Alias
-
Full Name
RNA polymerase II subunit A
Gene Type
protein_coding
Species
Poecilia_mexicana
Status
putative
Strand
Minus strand
Length
14159 bases
Position
chrKQ551326.1:239076-253234
Accession
106919136
RBP type
canonical RBP
Summary
-
RNA binding domains(RBDs)
Protein IDDomain Pfam IDE-value Domain number Total number
ENSPMEP00000001168RNA_pol_Rpb1_5PF04998.172.7e-10111
ENSPMEP00000001178RNA_pol_Rpb1_5PF04998.172.8e-10111
ENSPMEP00000001168RNA_pol_Rpb1_RPF05001.133.1e-23129
ENSPMEP00000001168RNA_pol_Rpb1_RPF05001.133.1e-23229
ENSPMEP00000001168RNA_pol_Rpb1_RPF05001.133.1e-23329
ENSPMEP00000001168RNA_pol_Rpb1_RPF05001.133.1e-23429
ENSPMEP00000001168RNA_pol_Rpb1_RPF05001.133.1e-23529
ENSPMEP00000001168RNA_pol_Rpb1_RPF05001.133.1e-23629
ENSPMEP00000001168RNA_pol_Rpb1_RPF05001.133.1e-23729
ENSPMEP00000001168RNA_pol_Rpb1_RPF05001.133.1e-23829
ENSPMEP00000001168RNA_pol_Rpb1_RPF05001.133.1e-23929
ENSPMEP00000001168RNA_pol_Rpb1_RPF05001.133.1e-231029
ENSPMEP00000001168RNA_pol_Rpb1_RPF05001.133.1e-231129
ENSPMEP00000001168RNA_pol_Rpb1_RPF05001.133.1e-231229
ENSPMEP00000001168RNA_pol_Rpb1_RPF05001.133.1e-231329
ENSPMEP00000001168RNA_pol_Rpb1_RPF05001.133.1e-231429
ENSPMEP00000001168RNA_pol_Rpb1_RPF05001.133.1e-231529
ENSPMEP00000001168RNA_pol_Rpb1_RPF05001.133.1e-231629
ENSPMEP00000001168RNA_pol_Rpb1_RPF05001.133.1e-231729
ENSPMEP00000001168RNA_pol_Rpb1_RPF05001.133.1e-231829
ENSPMEP00000001168RNA_pol_Rpb1_RPF05001.133.1e-231929
ENSPMEP00000001168RNA_pol_Rpb1_RPF05001.133.1e-232029
ENSPMEP00000001168RNA_pol_Rpb1_RPF05001.133.1e-232129
ENSPMEP00000001168RNA_pol_Rpb1_RPF05001.133.1e-232229
ENSPMEP00000001168RNA_pol_Rpb1_RPF05001.133.1e-232329
ENSPMEP00000001168RNA_pol_Rpb1_RPF05001.133.1e-232429
ENSPMEP00000001168RNA_pol_Rpb1_RPF05001.133.1e-232529
ENSPMEP00000001168RNA_pol_Rpb1_RPF05001.133.1e-232629
ENSPMEP00000001168RNA_pol_Rpb1_RPF05001.133.1e-232729
ENSPMEP00000001168RNA_pol_Rpb1_RPF05001.133.1e-232829
ENSPMEP00000001168RNA_pol_Rpb1_RPF05001.133.1e-232929
ENSPMEP00000001178RNA_pol_Rpb1_RPF05001.134.8e-18129
ENSPMEP00000001178RNA_pol_Rpb1_RPF05001.134.8e-18229
ENSPMEP00000001178RNA_pol_Rpb1_RPF05001.134.8e-18329
ENSPMEP00000001178RNA_pol_Rpb1_RPF05001.134.8e-18429
ENSPMEP00000001178RNA_pol_Rpb1_RPF05001.134.8e-18529
ENSPMEP00000001178RNA_pol_Rpb1_RPF05001.134.8e-18629
ENSPMEP00000001178RNA_pol_Rpb1_RPF05001.134.8e-18729
ENSPMEP00000001178RNA_pol_Rpb1_RPF05001.134.8e-18829
ENSPMEP00000001178RNA_pol_Rpb1_RPF05001.134.8e-18929
ENSPMEP00000001178RNA_pol_Rpb1_RPF05001.134.8e-181029
ENSPMEP00000001178RNA_pol_Rpb1_RPF05001.134.8e-181129
ENSPMEP00000001178RNA_pol_Rpb1_RPF05001.134.8e-181229
ENSPMEP00000001178RNA_pol_Rpb1_RPF05001.134.8e-181329
ENSPMEP00000001178RNA_pol_Rpb1_RPF05001.134.8e-181429
ENSPMEP00000001178RNA_pol_Rpb1_RPF05001.134.8e-181529
ENSPMEP00000001178RNA_pol_Rpb1_RPF05001.134.8e-181629
ENSPMEP00000001178RNA_pol_Rpb1_RPF05001.134.8e-181729
ENSPMEP00000001178RNA_pol_Rpb1_RPF05001.134.8e-181829
ENSPMEP00000001178RNA_pol_Rpb1_RPF05001.134.8e-181929
ENSPMEP00000001178RNA_pol_Rpb1_RPF05001.134.8e-182029
ENSPMEP00000001178RNA_pol_Rpb1_RPF05001.134.8e-182129
ENSPMEP00000001178RNA_pol_Rpb1_RPF05001.134.8e-182229
ENSPMEP00000001178RNA_pol_Rpb1_RPF05001.134.8e-182329
ENSPMEP00000001178RNA_pol_Rpb1_RPF05001.134.8e-182429
ENSPMEP00000001178RNA_pol_Rpb1_RPF05001.134.8e-182529
ENSPMEP00000001178RNA_pol_Rpb1_RPF05001.134.8e-182629
ENSPMEP00000001178RNA_pol_Rpb1_RPF05001.134.8e-182729
ENSPMEP00000001178RNA_pol_Rpb1_RPF05001.134.8e-182829
ENSPMEP00000001178RNA_pol_Rpb1_RPF05001.134.8e-182929
ENSPMEP00000001168RNA_pol_Rpb1_4PF05000.171.2e-3711
ENSPMEP00000001178RNA_pol_Rpb1_4PF05000.171.3e-3711
ENSPMEP00000001168RNA_pol_Rpb1_2PF00623.209.7e-7511
ENSPMEP00000001178RNA_pol_Rpb1_2PF00623.201e-7411
ENSPMEP00000001168RNA_pol_Rpb1_3PF04983.182.8e-5011
ENSPMEP00000001178RNA_pol_Rpb1_3PF04983.182.9e-5011
ENSPMEP00000001168RNA_pol_Rpb1_1PF04997.127e-10911
ENSPMEP00000001178RNA_pol_Rpb1_1PF04997.127.3e-10911
ENSPMEP00000001168RNA_pol_Rpb1_7PF04990.126.3e-5511
ENSPMEP00000001178RNA_pol_Rpb1_7PF04990.126.4e-5511
ENSPMEP00000001168RNA_pol_Rpb1_6PF04992.144.9e-6711
ENSPMEP00000001178RNA_pol_Rpb1_6PF04992.145.1e-6711
Transcripts
Transcript IDNameLengthRefSeq ID Protein IDLengthRefSeq IDUniportKB ID
ENSPMET00000014643-8161XM_014989321ENSPMEP000000011781907 (aa)XP_014844807UPI0004447E23
ENSPMET00000014656-5610-ENSPMEP000000011681869 (aa)--
Gene Model
Click here to download ENSPMEG00000002071's gene model file
Protein-Protein Interaction (PPI)

Clik here to download ENSPMEG00000002071's network
Paralogs
Ensembl IDGene SymbolCoverageIdentiy ParalogGene SymbolCoverageIdentiy
ENSPMEG00000002071polr2a7037.053ENSPMEG00000006821polr3a9137.053
ENSPMEG00000002071polr2a6034.286ENSPMEG00000006463polr1a7034.286
Orthologs
Ensembl IDGene SymbolCoverageIdentiy OrthologGene SymbolCoverageIdentiy Species
ENSPMEG00000002071polr2a8998.573ENSAPOG00000006552polr2a8898.573Acanthochromis_polyacanthus
ENSPMEG00000002071polr2a9994.238ENSAMEG00000016265-8594.245Ailuropoda_melanoleuca
ENSPMEG00000002071polr2a9998.761ENSACIG00000015982polr2a10098.761Amphilophus_citrinellus
ENSPMEG00000002071polr2a10096.736ENSAOCG00000004255polr2a10096.736Amphiprion_ocellaris
ENSPMEG00000002071polr2a9998.923ENSAPEG00000012623polr2a10098.923Amphiprion_percula
ENSPMEG00000002071polr2a9998.384ENSATEG00000019644polr2a10098.384Anabas_testudineus
ENSPMEG00000002071polr2a9994.720ENSACAG00000014561POLR2A8594.727Anolis_carolinensis
ENSPMEG00000002071polr2a9994.723ENSANAG00000020093-9192.436Aotus_nancymaae
ENSPMEG00000002071polr2a9998.169ENSACLG00000006735polr2a10098.169Astatotilapia_calliptera
ENSPMEG00000002071polr2a9997.738ENSAMXG00000020046polr2a10097.738Astyanax_mexicanus
ENSPMEG00000002071polr2a9994.600ENSBTAG00000046765POLR2A8594.606Bos_taurus
ENSPMEG00000002071polr2a9992.365ENSCAFG00000016532POLR2A9794.544Canis_familiaris
ENSPMEG00000002071polr2a9993.961ENSCAFG00020007929-9191.692Canis_lupus_dingo
ENSPMEG00000002071polr2a9994.600ENSCHIG00000027173-8594.606Capra_hircus
ENSPMEG00000002071polr2a9994.723ENSTSYG00000012803-9192.436Carlito_syrichta
ENSPMEG00000002071polr2a9891.051ENSCAPG00000001882-8893.616Cavia_aperea
ENSPMEG00000002071polr2a9991.071ENSCPOG00000014812-9193.524Cavia_porcellus
ENSPMEG00000002071polr2a9994.723ENSCCAG00000020938-9192.436Cebus_capucinus
ENSPMEG00000002071polr2a9994.600ENSCATG00000013680-9191.754Cercocebus_atys
ENSPMEG00000002071polr2a9994.596ENSCLAG00000012196-9192.312Chinchilla_lanigera
ENSPMEG00000002071polr2a9985.811ENSCSAG00000011644-8585.829Chlorocebus_sabaeus
ENSPMEG00000002071polr2a9988.696ENSCPBG00000012697POLR2A9985.788Chrysemys_picta_bellii
ENSPMEG00000002071polr2a9676.671ENSCING00000007884-8877.228Ciona_intestinalis
ENSPMEG00000002071polr2a9379.630ENSCSAVG00000008334-9979.605Ciona_savignyi
ENSPMEG00000002071polr2a9993.917ENSCANG00000010622-9190.915Colobus_angolensis_palliatus
ENSPMEG00000002071polr2a9088.959ENSCGRG00001003538Polr2a8989.460Cricetulus_griseus_chok1gshd
ENSPMEG00000002071polr2a8491.017ENSCGRG00000012105Polr2a8591.028Cricetulus_griseus_crigri
ENSPMEG00000002071polr2a9997.415ENSCSEG00000002635polr2a10097.415Cynoglossus_semilaevis
ENSPMEG00000002071polr2a9999.736ENSCVAG00000005156polr2a9999.736Cyprinodon_variegatus
ENSPMEG00000002071polr2a9997.416ENSDARG00000099966polr2a9997.416Danio_rerio
ENSPMEG00000002071polr2a9991.167ENSDNOG00000016482-8591.178Dasypus_novemcinctus
ENSPMEG00000002071polr2a9994.723ENSDORG00000008667Polr2a9192.436Dipodomys_ordii
ENSPMEG00000002071polr2a9970.095FBgn0003277RpII2159075.217Drosophila_melanogaster
ENSPMEG00000002071polr2a9490.407ENSETEG00000002540-8891.524Echinops_telfairi
ENSPMEG00000002071polr2a8487.274ENSEBUG00000013967polr2a8987.259Eptatretus_burgeri
ENSPMEG00000002071polr2a9992.626ENSEASG00005019114-9190.391Equus_asinus_asinus
ENSPMEG00000002071polr2a9994.600ENSECAG00000018485POLR2A8594.606Equus_caballus
ENSPMEG00000002071polr2a8794.459ENSEEUG00000001154-9594.459Erinaceus_europaeus
ENSPMEG00000002071polr2a9195.394ENSELUG00000014284polr2a8495.394Esox_lucius
ENSPMEG00000002071polr2a9994.538ENSFDAG00000008287-8594.544Fukomys_damarensis
ENSPMEG00000002071polr2a9999.472ENSFHEG00000001768polr2a9999.472Fundulus_heteroclitus
ENSPMEG00000002071polr2a9693.253ENSGMOG00000007725polr2a10093.281Gadus_morhua
ENSPMEG00000002071polr2a10094.661ENSGAFG00000005389polr2a10095.217Gambusia_affinis
ENSPMEG00000002071polr2a9994.015ENSGACG00000019366polr2a10093.792Gasterosteus_aculeatus
ENSPMEG00000002071polr2a9992.508ENSGGOG00000014800-9693.096Gorilla_gorilla
ENSPMEG00000002071polr2a9998.169ENSHBUG00000018937polr2a9998.153Haplochromis_burtoni
ENSPMEG00000002071polr2a9994.660ENSHGLG00000012381POLR2A9192.374Heterocephalus_glaber_female
ENSPMEG00000002071polr2a9994.660ENSHGLG00100014843POLR2A9192.374Heterocephalus_glaber_male
ENSPMEG00000002071polr2a9997.942ENSHCOG00000011874polr2a9997.942Hippocampus_comes
ENSPMEG00000002071polr2a9997.256ENSIPUG00000002613Polr2a10097.254Ictalurus_punctatus
ENSPMEG00000002071polr2a9994.723ENSSTOG00000001304-9192.436Ictidomys_tridecemlineatus
ENSPMEG00000002071polr2a9994.723ENSJJAG00000013049Polr2a9192.436Jaculus_jaculus
ENSPMEG00000002071polr2a8492.308ENSKMAG00000016343polr2a8692.308Kryptolebias_marmoratus
ENSPMEG00000002071polr2a9998.331ENSLBEG00000027652polr2a10098.331Labrus_bergylta
ENSPMEG00000002071polr2a9585.389ENSLACG00000012071POLR2A8885.461Latimeria_chalumnae
ENSPMEG00000002071polr2a8897.227ENSLOCG00000013863polr2a8696.772Lepisosteus_oculatus
ENSPMEG00000002071polr2a9994.600ENSLAFG00000008626-8694.606Loxodonta_africana
ENSPMEG00000002071polr2a5293.361ENSMFAG00000007042-9993.361Macaca_fascicularis
ENSPMEG00000002071polr2a9994.723ENSMMUG00000023620-9192.436Macaca_mulatta
ENSPMEG00000002071polr2a9994.278ENSMNEG00000040407-9192.683Macaca_nemestrina
ENSPMEG00000002071polr2a9890.143ENSMLEG00000030263-9993.361Mandrillus_leucophaeus
ENSPMEG00000002071polr2a9998.470ENSMAMG00000003351polr2a9998.470Mastacembelus_armatus
ENSPMEG00000002071polr2a9998.153ENSMZEG00005021429polr2a9998.153Maylandia_zebra
ENSPMEG00000002071polr2a5294.190ENSMAUG00000021055-9994.190Mesocricetus_auratus
ENSPMEG00000002071polr2a9994.538ENSMICG00000013372-9893.756Microcebus_murinus
ENSPMEG00000002071polr2a9990.025ENSMOCG00000018279Polr2a9790.235Microtus_ochrogaster
ENSPMEG00000002071polr2a9997.826ENSMMOG00000012515polr2a9697.826Mola_mola
ENSPMEG00000002071polr2a9994.351ENSMODG00000007009-8594.358Monodelphis_domestica
ENSPMEG00000002071polr2a9997.999ENSMALG00000008716polr2a9697.999Monopterus_albus
ENSPMEG00000002071polr2a9994.723MGP_CAROLIEiJ_G0016587Polr2a9192.436Mus_caroli
ENSPMEG00000002071polr2a9994.723ENSMUSG00000005198Polr2a9192.436Mus_musculus
ENSPMEG00000002071polr2a9992.460MGP_PahariEiJ_G0017718Polr2a8592.469Mus_pahari
ENSPMEG00000002071polr2a9994.723MGP_SPRETEiJ_G0017423Polr2a9192.436Mus_spretus
ENSPMEG00000002071polr2a9994.475ENSMPUG00000009648-8594.482Mustela_putorius_furo
ENSPMEG00000002071polr2a9993.986ENSMLUG00000009088-8593.994Myotis_lucifugus
ENSPMEG00000002071polr2a9994.723ENSNGAG00000002543Polr2a9192.436Nannospalax_galili
ENSPMEG00000002071polr2a9998.331ENSNBRG00000002005polr2a10098.331Neolamprologus_brichardi
ENSPMEG00000002071polr2a9994.723ENSNLEG00000009460-9192.436Nomascus_leucogenys
ENSPMEG00000002071polr2a9395.316ENSMEUG00000008611-9586.775Notamacropus_eugenii
ENSPMEG00000002071polr2a8394.315ENSOPRG00000015116-9994.315Ochotona_princeps
ENSPMEG00000002071polr2a7894.456ENSODEG00000017674-10089.914Octodon_degus
ENSPMEG00000002071polr2a9998.417ENSONIG00000009231polr2a9998.417Oreochromis_niloticus
ENSPMEG00000002071polr2a5093.991ENSOANG00000003303-9893.991Ornithorhynchus_anatinus
ENSPMEG00000002071polr2a9890.517ENSOCUG00000017929-9994.482Oryctolagus_cuniculus
ENSPMEG00000002071polr2a9998.681ENSORLG00000006431polr2a10098.654Oryzias_latipes
ENSPMEG00000002071polr2a9998.681ENSORLG00020010235polr2a10098.654Oryzias_latipes_hni
ENSPMEG00000002071polr2a9998.575ENSORLG00015007075polr2a10098.546Oryzias_latipes_hsok
ENSPMEG00000002071polr2a9798.382ENSOMEG00000010713polr2a10098.382Oryzias_melastigma
ENSPMEG00000002071polr2a9994.600ENSOGAG00000033608-8594.606Otolemur_garnettii
ENSPMEG00000002071polr2a8994.600ENSOARG00000013874-8994.606Ovis_aries
ENSPMEG00000002071polr2a9994.626ENSPPAG00000043734-8594.222Pan_paniscus
ENSPMEG00000002071polr2a9994.723ENSPTRG00000008691POLR2A9192.436Pan_troglodytes
ENSPMEG00000002071polr2a9994.024ENSPANG00000024099-9191.754Papio_anubis
ENSPMEG00000002071polr2a8095.721ENSPKIG00000005727polr2a8595.656Paramormyrops_kingsleyae
ENSPMEG00000002071polr2a9892.770ENSPSIG00000014006POLR2A10092.689Pelodiscus_sinensis
ENSPMEG00000002071polr2a10097.567ENSPMGG00000019734polr2a10097.567Periophthalmus_magnuspinnatus
ENSPMEG00000002071polr2a9994.723ENSPEMG00000012521Polr2a9192.436Peromyscus_maniculatus_bairdii
ENSPMEG00000002071polr2a8894.355ENSPCIG00000028851-8294.355Phascolarctos_cinereus
ENSPMEG00000002071polr2a100100.000ENSPFOG00000007890polr2a100100.000Poecilia_formosa
ENSPMEG00000002071polr2a100100.000ENSPLAG00000007399polr2a100100.000Poecilia_latipinna
ENSPMEG00000002071polr2a9999.947ENSPREG00000013122polr2a10099.946Poecilia_reticulata
ENSPMEG00000002071polr2a9392.427ENSPPYG00000007924-8691.816Pongo_abelii
ENSPMEG00000002071polr2a9194.868ENSPCAG00000006951-7794.868Procavia_capensis
ENSPMEG00000002071polr2a9994.723ENSPCOG00000025260-9192.436Propithecus_coquereli
ENSPMEG00000002071polr2a9994.289ENSPVAG00000005069-8594.296Pteropus_vampyrus
ENSPMEG00000002071polr2a9998.206ENSPNYG00000022340polr2a9998.206Pundamilia_nyererei
ENSPMEG00000002071polr2a9997.889ENSPNAG00000011237polr2a9997.889Pygocentrus_nattereri
ENSPMEG00000002071polr2a9994.538ENSRNOG00000028834Polr2a8594.544Rattus_norvegicus
ENSPMEG00000002071polr2a8494.723ENSRBIG00000002471-8694.234Rhinopithecus_bieti
ENSPMEG00000002071polr2a9694.600ENSRROG00000029583-8594.606Rhinopithecus_roxellana
ENSPMEG00000002071polr2a8680.769YDL140CRPO219882.090Saccharomyces_cerevisiae
ENSPMEG00000002071polr2a9994.723ENSSBOG00000000808-9192.436Saimiri_boliviensis_boliviensis
ENSPMEG00000002071polr2a8494.351ENSSHAG00000002858-8494.358Sarcophilus_harrisii
ENSPMEG00000002071polr2a9997.954ENSSFOG00015023275polr2a10097.954Scleropages_formosus
ENSPMEG00000002071polr2a9995.726ENSSMAG00000009137polr2a8995.409Scophthalmus_maximus
ENSPMEG00000002071polr2a9998.600ENSSDUG00000020466polr2a10098.600Seriola_dumerili
ENSPMEG00000002071polr2a9998.546ENSSLDG00000020613polr2a10098.546Seriola_lalandi_dorsalis
ENSPMEG00000002071polr2a9890.191ENSSARG00000005875-9991.016Sorex_araneus
ENSPMEG00000002071polr2a10098.629ENSSPAG00000016741polr2a9598.629Stegastes_partitus
ENSPMEG00000002071polr2a9993.669ENSSSCG00000028278-8593.676Sus_scrofa
ENSPMEG00000002071polr2a9992.374ENSTRUG00000012320polr2a8192.374Takifugu_rubripes
ENSPMEG00000002071polr2a9796.712ENSTNIG00000010136polr2a10096.712Tetraodon_nigroviridis
ENSPMEG00000002071polr2a7594.481ENSTBEG00000013294-5694.481Tupaia_belangeri
ENSPMEG00000002071polr2a9992.924ENSTTRG00000014273-8592.932Tursiops_truncatus
ENSPMEG00000002071polr2a9991.348ENSUAMG00000014866-9591.651Ursus_americanus
ENSPMEG00000002071polr2a9291.991ENSUMAG00000015732-8789.944Ursus_maritimus
ENSPMEG00000002071polr2a6498.370ENSVPAG00000008842-7698.370Vicugna_pacos
ENSPMEG00000002071polr2a8494.538ENSVVUG00000027878-8692.374Vulpes_vulpes
ENSPMEG00000002071polr2a8992.008ENSXETG00000012465polr2a9092.018Xenopus_tropicalis
ENSPMEG00000002071polr2a9599.155ENSXCOG00000001804polr2a9999.155Xiphophorus_couchianus
ENSPMEG00000002071polr2a9999.894ENSXMAG00000015687polr2a10099.892Xiphophorus_maculatus

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