EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSPMEG00000002388 (Gene tree)
Gene ID: 106921186
Gene Symbol: -
Alias: -
Full Name: serine/arginine-rich splicing factor 1B
Gene Type: protein_coding
Species: Poecilia_mexicana
Status: putative
Strand: Plus strand
Length: 4212 bases
Position: chrKQ551011.1:63880-68091
Accession: 106921186
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSPMEP00000001465	RRM_1	PF00076.22	2.1e-33	1	2
ENSPMEP00000001465	RRM_1	PF00076.22	2.1e-33	2	2

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSPMET00000014141	-	2578	XM_014992690	ENSPMEP00000001465	246 (aa)	XP_014848176	UPI000443F7BD

Gene Model

Click here to download ENSPMEG00000002388's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSPMEG00000002388's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSPMEG00000002388	-	73	68.681	ENSPMEG00000008809	srsf9	73	68.132
ENSPMEG00000002388	-	79	40.845	ENSPMEG00000016339	srsf5a	65	39.815
ENSPMEG00000002388	-	50	82.258	ENSPMEG00000014312	-	98	82.258
ENSPMEG00000002388	-	94	41.065	ENSPMEG00000012751	srsf5b	82	49.618
ENSPMEG00000002388	-	50	82.258	ENSPMEG00000020607	-	98	82.258

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSPMEG00000002388	-	98	85.714	ENSG00000136450	SRSF1	94	86.911	Homo_sapiens
ENSPMEG00000002388	-	79	92.462	ENSAPOG00000008542	-	81	92.118	Acanthochromis_polyacanthus
ENSPMEG00000002388	-	78	87.565	ENSAPOG00000002748	-	79	87.310	Acanthochromis_polyacanthus
ENSPMEG00000002388	-	79	85.567	ENSAMEG00000002635	SRSF1	79	87.879	Ailuropoda_melanoleuca
ENSPMEG00000002388	-	78	87.047	ENSACIG00000008091	srsf1a	84	86.802	Amphilophus_citrinellus
ENSPMEG00000002388	-	79	92.462	ENSAOCG00000000337	-	82	92.118	Amphiprion_ocellaris
ENSPMEG00000002388	-	78	87.565	ENSAOCG00000010671	-	84	87.310	Amphiprion_ocellaris
ENSPMEG00000002388	-	78	87.565	ENSAPEG00000009915	-	84	87.310	Amphiprion_percula
ENSPMEG00000002388	-	79	92.462	ENSAPEG00000023352	-	81	92.118	Amphiprion_percula
ENSPMEG00000002388	-	78	87.565	ENSATEG00000022403	-	79	87.310	Anabas_testudineus
ENSPMEG00000002388	-	83	88.725	ENSATEG00000021567	-	82	91.542	Anabas_testudineus
ENSPMEG00000002388	-	79	88.660	ENSACAG00000005542	-	79	88.889	Anolis_carolinensis
ENSPMEG00000002388	-	98	85.714	ENSANAG00000020583	-	96	82.857	Aotus_nancymaae
ENSPMEG00000002388	-	80	63.636	ENSANAG00000025417	-	75	62.626	Aotus_nancymaae
ENSPMEG00000002388	-	95	83.817	ENSAMXG00000035996	srsf1a	81	88.235	Astyanax_mexicanus
ENSPMEG00000002388	-	54	76.623	ENSAMXG00000024373	-	73	77.500	Astyanax_mexicanus
ENSPMEG00000002388	-	98	85.714	ENSBTAG00000014766	SRSF1	79	89.899	Bos_taurus
ENSPMEG00000002388	-	79	82.474	ENSCJAG00000008111	-	88	82.828	Callithrix_jacchus
ENSPMEG00000002388	-	98	85.714	ENSCJAG00000041713	-	96	82.857	Callithrix_jacchus
ENSPMEG00000002388	-	98	85.714	ENSCAFG00000017430	SRSF1	78	89.899	Canis_familiaris
ENSPMEG00000002388	-	98	85.714	ENSCAFG00020025632	-	78	89.899	Canis_lupus_dingo
ENSPMEG00000002388	-	79	89.691	ENSCHIG00000010787	SRSF1	79	89.899	Capra_hircus
ENSPMEG00000002388	-	98	85.714	ENSTSYG00000013899	-	96	82.857	Carlito_syrichta
ENSPMEG00000002388	-	98	85.714	ENSCPOG00000032681	-	79	89.899	Cavia_porcellus
ENSPMEG00000002388	-	98	85.714	ENSCCAG00000029484	-	96	82.857	Cebus_capucinus
ENSPMEG00000002388	-	98	85.714	ENSCATG00000042294	-	96	82.857	Cercocebus_atys
ENSPMEG00000002388	-	98	85.714	ENSCLAG00000014707	-	79	89.899	Chinchilla_lanigera
ENSPMEG00000002388	-	98	84.898	ENSCSAG00000005642	-	78	88.889	Chlorocebus_sabaeus
ENSPMEG00000002388	-	79	89.691	ENSCHOG00000001899	SRSF1	79	89.899	Choloepus_hoffmanni
ENSPMEG00000002388	-	98	85.306	ENSCPBG00000009851	-	79	89.394	Chrysemys_picta_bellii
ENSPMEG00000002388	-	98	85.714	ENSCANG00000029726	-	96	82.857	Colobus_angolensis_palliatus
ENSPMEG00000002388	-	98	85.714	ENSCGRG00001000670	Srsf1	78	89.899	Cricetulus_griseus_chok1gshd
ENSPMEG00000002388	-	98	85.714	ENSCGRG00000005590	Srsf1	79	89.899	Cricetulus_griseus_crigri
ENSPMEG00000002388	-	79	83.732	ENSCSEG00000009973	-	81	83.568	Cynoglossus_semilaevis
ENSPMEG00000002388	-	78	87.692	ENSCSEG00000014272	-	80	87.940	Cynoglossus_semilaevis
ENSPMEG00000002388	-	100	98.785	ENSCVAG00000005458	-	100	98.785	Cyprinodon_variegatus
ENSPMEG00000002388	-	78	87.565	ENSCVAG00000018617	-	79	87.310	Cyprinodon_variegatus
ENSPMEG00000002388	-	80	86.341	ENSDARG00000057691	srsf1a	100	86.528	Danio_rerio
ENSPMEG00000002388	-	80	89.796	ENSDARG00000017843	srsf1b	81	90.000	Danio_rerio
ENSPMEG00000002388	-	98	85.714	ENSDNOG00000011737	-	78	89.899	Dasypus_novemcinctus
ENSPMEG00000002388	-	98	85.714	ENSDORG00000015082	Srsf1	79	89.899	Dipodomys_ordii
ENSPMEG00000002388	-	74	88.462	ENSETEG00000005349	-	62	89.011	Echinops_telfairi
ENSPMEG00000002388	-	98	85.714	ENSEASG00005002922	-	78	89.899	Equus_asinus_asinus
ENSPMEG00000002388	-	79	89.691	ENSECAG00000016654	SRSF1	79	89.899	Equus_caballus
ENSPMEG00000002388	-	74	89.560	ENSEEUG00000009255	-	62	90.110	Erinaceus_europaeus
ENSPMEG00000002388	-	80	88.265	ENSELUG00000021646	srsf1a	79	88.000	Esox_lucius
ENSPMEG00000002388	-	98	85.714	ENSFCAG00000002250	-	91	89.617	Felis_catus
ENSPMEG00000002388	-	75	85.821	ENSFALG00000005062	-	78	69.697	Ficedula_albicollis
ENSPMEG00000002388	-	98	85.714	ENSFDAG00000010646	-	79	89.899	Fukomys_damarensis
ENSPMEG00000002388	-	78	87.565	ENSFHEG00000003174	srsf1a	84	87.310	Fundulus_heteroclitus
ENSPMEG00000002388	-	91	83.556	ENSGMOG00000014787	-	81	83.756	Gadus_morhua
ENSPMEG00000002388	-	79	89.175	ENSGALG00000005525	SRSF1	79	89.394	Gallus_gallus
ENSPMEG00000002388	-	79	86.082	ENSGACG00000020621	srsf1b	80	84.848	Gasterosteus_aculeatus
ENSPMEG00000002388	-	98	85.306	ENSGAGG00000022965	-	78	89.394	Gopherus_agassizii
ENSPMEG00000002388	-	98	85.714	ENSGGOG00000004386	SRSF1	96	82.857	Gorilla_gorilla
ENSPMEG00000002388	-	78	87.047	ENSHBUG00000016788	srsf1a	81	86.802	Haplochromis_burtoni
ENSPMEG00000002388	-	67	90.244	ENSHGLG00000000669	-	78	91.667	Heterocephalus_glaber_female
ENSPMEG00000002388	-	67	90.244	ENSHGLG00000000600	-	78	91.667	Heterocephalus_glaber_female
ENSPMEG00000002388	-	98	85.714	ENSHGLG00100016906	-	79	89.899	Heterocephalus_glaber_male
ENSPMEG00000002388	-	80	82.412	ENSHCOG00000018918	srsf1a	79	84.236	Hippocampus_comes
ENSPMEG00000002388	-	79	89.744	ENSIPUG00000008750	srsf1b	80	89.447	Ictalurus_punctatus
ENSPMEG00000002388	-	93	81.590	ENSIPUG00000017039	srsf1a	80	87.624	Ictalurus_punctatus
ENSPMEG00000002388	-	98	85.714	ENSSTOG00000000243	-	91	89.617	Ictidomys_tridecemlineatus
ENSPMEG00000002388	-	98	85.714	ENSJJAG00000000102	-	79	89.899	Jaculus_jaculus
ENSPMEG00000002388	-	51	84.000	ENSJJAG00000014464	-	93	83.333	Jaculus_jaculus
ENSPMEG00000002388	-	78	87.565	ENSKMAG00000019232	srsf1a	79	87.310	Kryptolebias_marmoratus
ENSPMEG00000002388	-	80	85.930	ENSLBEG00000015294	-	82	87.192	Labrus_bergylta
ENSPMEG00000002388	-	78	87.565	ENSLBEG00000020864	-	84	87.310	Labrus_bergylta
ENSPMEG00000002388	-	79	86.667	ENSLACG00000014160	srsf1a	74	87.374	Latimeria_chalumnae
ENSPMEG00000002388	-	79	88.660	ENSLOCG00000005994	srsf1a	79	88.384	Lepisosteus_oculatus
ENSPMEG00000002388	-	79	89.691	ENSLAFG00000025743	SRSF1	79	89.899	Loxodonta_africana
ENSPMEG00000002388	-	98	85.714	ENSMFAG00000040003	-	96	82.857	Macaca_fascicularis
ENSPMEG00000002388	-	98	85.714	ENSMMUG00000004725	SRSF1	96	82.857	Macaca_mulatta
ENSPMEG00000002388	-	79	86.598	ENSMMUG00000003260	-	94	86.224	Macaca_mulatta
ENSPMEG00000002388	-	79	86.082	ENSMNEG00000015983	-	78	86.364	Macaca_nemestrina
ENSPMEG00000002388	-	98	85.714	ENSMNEG00000027680	-	96	82.857	Macaca_nemestrina
ENSPMEG00000002388	-	79	84.536	ENSMLEG00000015243	-	77	85.354	Mandrillus_leucophaeus
ENSPMEG00000002388	-	79	89.691	ENSMLEG00000040509	SRSF1	79	89.899	Mandrillus_leucophaeus
ENSPMEG00000002388	-	78	87.565	ENSMAMG00000018454	-	79	87.310	Mastacembelus_armatus
ENSPMEG00000002388	-	79	90.206	ENSMAMG00000019687	-	80	90.404	Mastacembelus_armatus
ENSPMEG00000002388	-	79	90.206	ENSMAMG00000019691	-	81	89.899	Mastacembelus_armatus
ENSPMEG00000002388	-	98	85.714	ENSMAUG00000021845	Srsf1	79	89.899	Mesocricetus_auratus
ENSPMEG00000002388	-	98	85.714	ENSMICG00000013639	-	96	82.857	Microcebus_murinus
ENSPMEG00000002388	-	98	85.714	ENSMOCG00000001996	Srsf1	79	89.899	Microtus_ochrogaster
ENSPMEG00000002388	-	78	87.047	ENSMMOG00000014354	srsf1a	84	86.802	Mola_mola
ENSPMEG00000002388	-	74	89.560	ENSMODG00000014781	-	62	89.560	Monodelphis_domestica
ENSPMEG00000002388	-	78	87.047	ENSMALG00000017129	-	76	86.802	Monopterus_albus
ENSPMEG00000002388	-	82	75.124	ENSMALG00000007763	-	79	78.788	Monopterus_albus
ENSPMEG00000002388	-	98	85.714	MGP_CAROLIEiJ_G0016943	Srsf1	91	89.617	Mus_caroli
ENSPMEG00000002388	-	98	85.714	ENSMUSG00000018379	Srsf1	91	89.617	Mus_musculus
ENSPMEG00000002388	-	98	85.714	MGP_PahariEiJ_G0018074	Srsf1	79	89.899	Mus_pahari
ENSPMEG00000002388	-	98	85.714	MGP_SPRETEiJ_G0017790	Srsf1	91	89.617	Mus_spretus
ENSPMEG00000002388	-	79	89.691	ENSMPUG00000015369	SRSF1	79	89.899	Mustela_putorius_furo
ENSPMEG00000002388	-	79	89.691	ENSMLUG00000011040	SRSF1	79	89.899	Myotis_lucifugus
ENSPMEG00000002388	-	82	83.085	ENSMLUG00000023995	-	79	83.333	Myotis_lucifugus
ENSPMEG00000002388	-	79	89.691	ENSNGAG00000011395	Srsf1	79	89.899	Nannospalax_galili
ENSPMEG00000002388	-	98	78.099	ENSNBRG00000008041	srsf1b	80	76.263	Neolamprologus_brichardi
ENSPMEG00000002388	-	98	85.714	ENSNLEG00000008088	-	96	82.857	Nomascus_leucogenys
ENSPMEG00000002388	-	50	86.290	ENSMEUG00000002783	-	98	85.600	Notamacropus_eugenii
ENSPMEG00000002388	-	54	90.909	ENSOPRG00000001234	-	74	92.647	Ochotona_princeps
ENSPMEG00000002388	-	98	85.714	ENSODEG00000011481	-	79	89.899	Octodon_degus
ENSPMEG00000002388	-	94	87.879	ENSONIG00000004860	-	81	88.889	Oreochromis_niloticus
ENSPMEG00000002388	-	78	87.047	ENSONIG00000013160	-	78	86.802	Oreochromis_niloticus
ENSPMEG00000002388	-	98	67.068	ENSOCUG00000010894	-	76	72.165	Oryctolagus_cuniculus
ENSPMEG00000002388	-	78	87.565	ENSORLG00000004580	srsf1a	79	87.310	Oryzias_latipes
ENSPMEG00000002388	-	78	87.565	ENSORLG00020009456	srsf1a	84	87.310	Oryzias_latipes_hni
ENSPMEG00000002388	-	78	87.565	ENSORLG00015014384	srsf1a	84	87.310	Oryzias_latipes_hsok
ENSPMEG00000002388	-	72	86.932	ENSOMEG00000004106	srsf1a	73	86.667	Oryzias_melastigma
ENSPMEG00000002388	-	84	89.320	ENSOGAG00000025950	-	79	89.899	Otolemur_garnettii
ENSPMEG00000002388	-	79	85.052	ENSOARG00000008323	SRSF1	78	84.848	Ovis_aries
ENSPMEG00000002388	-	98	85.714	ENSPPAG00000043403	-	96	82.857	Pan_paniscus
ENSPMEG00000002388	-	98	85.714	ENSPPRG00000004238	-	91	89.617	Panthera_pardus
ENSPMEG00000002388	-	98	85.714	ENSPTRG00000049077	SRSF1	96	82.857	Pan_troglodytes
ENSPMEG00000002388	-	98	66.939	ENSPANG00000030275	-	75	64.141	Papio_anubis
ENSPMEG00000002388	-	98	85.714	ENSPANG00000022305	-	96	82.857	Papio_anubis
ENSPMEG00000002388	-	79	89.175	ENSPKIG00000012857	srsf1b	80	88.889	Paramormyrops_kingsleyae
ENSPMEG00000002388	-	80	87.245	ENSPKIG00000007204	srsf1a	85	87.000	Paramormyrops_kingsleyae
ENSPMEG00000002388	-	79	82.143	ENSPSIG00000009000	-	74	91.971	Pelodiscus_sinensis
ENSPMEG00000002388	-	78	84.974	ENSPMGG00000013112	-	86	82.000	Periophthalmus_magnuspinnatus
ENSPMEG00000002388	-	80	85.787	ENSPMGG00000005467	-	79	87.302	Periophthalmus_magnuspinnatus
ENSPMEG00000002388	-	98	85.714	ENSPEMG00000021416	Srsf1	79	89.899	Peromyscus_maniculatus_bairdii
ENSPMEG00000002388	-	79	89.691	ENSPCIG00000006076	-	80	89.394	Phascolarctos_cinereus
ENSPMEG00000002388	-	100	100.000	ENSPFOG00000018325	-	88	100.000	Poecilia_formosa
ENSPMEG00000002388	-	100	100.000	ENSPLAG00000008416	srsf1b	100	100.000	Poecilia_latipinna
ENSPMEG00000002388	-	78	87.565	ENSPREG00000009667	srsf1a	79	87.310	Poecilia_reticulata
ENSPMEG00000002388	-	98	85.714	ENSPPYG00000008240	SRSF1	79	89.899	Pongo_abelii
ENSPMEG00000002388	-	79	89.691	ENSPCAG00000005199	SRSF1	79	89.899	Procavia_capensis
ENSPMEG00000002388	-	80	71.859	ENSPCOG00000025736	-	94	71.717	Propithecus_coquereli
ENSPMEG00000002388	-	98	85.714	ENSPCOG00000023654	-	96	82.857	Propithecus_coquereli
ENSPMEG00000002388	-	53	95.652	ENSPVAG00000000519	-	54	94.521	Pteropus_vampyrus
ENSPMEG00000002388	-	95	84.388	ENSPNAG00000022241	srsf1a	80	88.000	Pygocentrus_nattereri
ENSPMEG00000002388	-	79	87.113	ENSPNAG00000014601	srsf1b	80	86.869	Pygocentrus_nattereri
ENSPMEG00000002388	-	79	89.691	ENSRNOG00000050323	Srsf1	79	89.899	Rattus_norvegicus
ENSPMEG00000002388	-	98	85.714	ENSRBIG00000034445	-	96	82.857	Rhinopithecus_bieti
ENSPMEG00000002388	-	98	85.714	ENSRROG00000041506	-	96	82.857	Rhinopithecus_roxellana
ENSPMEG00000002388	-	98	85.714	ENSSBOG00000025377	-	96	82.857	Saimiri_boliviensis_boliviensis
ENSPMEG00000002388	-	79	89.691	ENSSHAG00000002552	-	80	89.394	Sarcophilus_harrisii
ENSPMEG00000002388	-	79	88.144	ENSSFOG00015004800	srsf1a	79	87.879	Scleropages_formosus
ENSPMEG00000002388	-	79	89.000	ENSSMAG00000009719	-	80	88.235	Scophthalmus_maximus
ENSPMEG00000002388	-	78	87.047	ENSSMAG00000007018	-	79	86.802	Scophthalmus_maximus
ENSPMEG00000002388	-	98	75.207	ENSSDUG00000003929	-	84	82.000	Seriola_dumerili
ENSPMEG00000002388	-	78	87.565	ENSSDUG00000011303	-	84	87.310	Seriola_dumerili
ENSPMEG00000002388	-	93	75.652	ENSSLDG00000016895	-	77	83.243	Seriola_lalandi_dorsalis
ENSPMEG00000002388	-	78	87.565	ENSSLDG00000010543	-	79	87.310	Seriola_lalandi_dorsalis
ENSPMEG00000002388	-	79	79.487	ENSSLDG00000016868	-	78	77.387	Seriola_lalandi_dorsalis
ENSPMEG00000002388	-	74	89.560	ENSSARG00000010949	-	62	90.110	Sorex_araneus
ENSPMEG00000002388	-	98	85.306	ENSSPUG00000000804	-	92	89.071	Sphenodon_punctatus
ENSPMEG00000002388	-	78	88.083	ENSSPAG00000022562	-	79	87.817	Stegastes_partitus
ENSPMEG00000002388	-	80	89.904	ENSSPAG00000014152	-	82	89.151	Stegastes_partitus
ENSPMEG00000002388	-	98	85.714	ENSSSCG00000017626	-	79	89.899	Sus_scrofa
ENSPMEG00000002388	-	54	90.226	ENSTGUG00000008416	-	74	91.971	Taeniopygia_guttata
ENSPMEG00000002388	-	78	86.528	ENSTRUG00000003691	srsf1a	79	86.294	Takifugu_rubripes
ENSPMEG00000002388	-	78	86.528	ENSTNIG00000016223	srsf1a	79	86.294	Tetraodon_nigroviridis
ENSPMEG00000002388	-	74	87.912	ENSTBEG00000015378	-	62	88.462	Tupaia_belangeri
ENSPMEG00000002388	-	54	90.909	ENSTTRG00000007310	SRSF1	74	92.647	Tursiops_truncatus
ENSPMEG00000002388	-	79	89.691	ENSUAMG00000009858	SRSF1	79	89.899	Ursus_americanus
ENSPMEG00000002388	-	98	85.714	ENSUMAG00000000455	-	78	89.899	Ursus_maritimus
ENSPMEG00000002388	-	79	89.175	ENSVPAG00000010094	SRSF1	79	89.394	Vicugna_pacos
ENSPMEG00000002388	-	98	85.714	ENSVVUG00000011882	-	78	89.899	Vulpes_vulpes
ENSPMEG00000002388	-	79	87.113	ENSXETG00000008954	srsf1	81	82.870	Xenopus_tropicalis
ENSPMEG00000002388	-	78	87.565	ENSXMAG00000011766	srsf1a	79	87.310	Xiphophorus_maculatus