EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSPMEG00000002425 (Gene tree)
Gene ID: 106915237
Gene Symbol: -
Alias: -
Full Name: heterogeneous nuclear ribonucleoprotein A1
Gene Type: protein_coding
Species: Poecilia_mexicana
Status: putative
Strand: Minus strand
Length: 3111 bases
Position: chrKQ551135.1:220381-223491
Accession: 106915237
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSPMEP00000001500	RRM_1	PF00076.22	2.8e-36	1	2
ENSPMEP00000001500	RRM_1	PF00076.22	2.8e-36	2	2

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSPMET00000014095	-	1896	XM_014982704	ENSPMEP00000001500	338 (aa)	XP_014838190	UPI0004446E8F

Gene Model

Click here to download ENSPMEG00000002425's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSPMEG00000002425's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSPMEG00000002425	-	66	35.714	ENSPMEG00000000152	hnrnpd	67	39.035
ENSPMEG00000002425	-	68	43.548	ENSPMEG00000020921	-	53	45.000
ENSPMEG00000002425	-	50	40.000	ENSPMEG00000023285	-	75	37.559
ENSPMEG00000002425	-	56	81.481	ENSPMEG00000006390	hnrnpa3	65	76.147
ENSPMEG00000002425	-	57	41.667	ENSPMEG00000013247	msi2a	71	40.517
ENSPMEG00000002425	-	56	40.957	ENSPMEG00000012796	MSI1	55	40.957
ENSPMEG00000002425	-	50	38.824	ENSPMEG00000019974	hnrnpaba	64	36.493
ENSPMEG00000002425	-	62	42.614	ENSPMEG00000007025	-	53	42.135
ENSPMEG00000002425	-	52	59.649	ENSPMEG00000017025	HNRNPA0	97	57.222

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSPMEG00000002425	-	90	85.902	ENSAPOG00000019369	-	90	85.246	Acanthochromis_polyacanthus
ENSPMEG00000002425	-	52	56.497	ENSACIG00000021815	-	95	55.385	Amphilophus_citrinellus
ENSPMEG00000002425	-	66	97.309	ENSAOCG00000005289	-	68	96.889	Amphiprion_ocellaris
ENSPMEG00000002425	-	66	97.309	ENSAPEG00000004179	-	68	96.889	Amphiprion_percula
ENSPMEG00000002425	-	52	59.748	ENSATEG00000003423	-	75	59.748	Anabas_testudineus
ENSPMEG00000002425	-	90	88.197	ENSATEG00000022918	hnrnpa1a	92	95.431	Anabas_testudineus
ENSPMEG00000002425	-	54	56.593	ENSACAG00000017109	-	65	50.893	Anolis_carolinensis
ENSPMEG00000002425	-	66	95.133	ENSACLG00000006940	-	68	94.737	Astatotilapia_calliptera
ENSPMEG00000002425	-	54	85.165	ENSAMXG00000006296	hnrnpa1a	88	63.253	Astyanax_mexicanus
ENSPMEG00000002425	-	54	63.842	ENSAMXG00000037730	-	56	63.351	Astyanax_mexicanus
ENSPMEG00000002425	-	54	54.190	ENSCSEG00000014051	-	73	53.672	Cynoglossus_semilaevis
ENSPMEG00000002425	-	66	88.596	ENSCSEG00000007589	hnrnpa1a	83	82.667	Cynoglossus_semilaevis
ENSPMEG00000002425	-	100	97.345	ENSCVAG00000012637	hnrnpa1a	100	97.345	Cyprinodon_variegatus
ENSPMEG00000002425	-	56	81.250	ENSDARG00000011020	hnrnpa1a	55	76.498	Danio_rerio
ENSPMEG00000002425	-	75	46.825	ENSDORG00000026425	-	61	55.399	Dipodomys_ordii
ENSPMEG00000002425	-	57	88.660	ENSELUG00000007372	-	65	77.253	Esox_lucius
ENSPMEG00000002425	-	54	62.011	ENSGMOG00000020353	-	98	61.905	Gadus_morhua
ENSPMEG00000002425	-	54	88.043	ENSGMOG00000017950	hnrnpa1a	50	87.568	Gadus_morhua
ENSPMEG00000002425	-	100	99.118	ENSGAFG00000007751	-	100	99.118	Gambusia_affinis
ENSPMEG00000002425	-	53	55.056	ENSGAFG00000016803	-	64	52.804	Gambusia_affinis
ENSPMEG00000002425	-	62	89.888	ENSGACG00000009435	-	87	80.000	Gasterosteus_aculeatus
ENSPMEG00000002425	-	66	95.133	ENSHBUG00000005647	hnrnpa1a	68	94.737	Haplochromis_burtoni
ENSPMEG00000002425	-	54	63.277	ENSIPUG00000001991	-	80	62.304	Ictalurus_punctatus
ENSPMEG00000002425	-	59	82.090	ENSIPUG00000002023	hnrnpa1a	75	85.000	Ictalurus_punctatus
ENSPMEG00000002425	-	57	84.021	ENSIPUG00000022440	-	74	84.393	Ictalurus_punctatus
ENSPMEG00000002425	-	100	88.270	ENSKMAG00000020859	-	67	97.333	Kryptolebias_marmoratus
ENSPMEG00000002425	-	66	91.593	ENSLBEG00000010010	hnrnpa1a	66	92.105	Labrus_bergylta
ENSPMEG00000002425	-	62	71.739	ENSMFAG00000028351	-	65	64.758	Macaca_fascicularis
ENSPMEG00000002425	-	66	95.964	ENSMAMG00000007606	-	91	92.283	Mastacembelus_armatus
ENSPMEG00000002425	-	66	95.133	ENSMZEG00005027173	hnrnpa1a	68	94.737	Maylandia_zebra
ENSPMEG00000002425	-	59	92.000	ENSMMOG00000008251	hnrnpa1a	95	85.281	Mola_mola
ENSPMEG00000002425	-	52	56.497	ENSMALG00000008886	-	93	56.545	Monopterus_albus
ENSPMEG00000002425	-	66	95.964	ENSMALG00000014091	hnrnpa1a	65	95.556	Monopterus_albus
ENSPMEG00000002425	-	90	87.013	ENSNBRG00000018441	-	91	87.013	Neolamprologus_brichardi
ENSPMEG00000002425	-	57	58.511	ENSNBRG00000014469	-	87	58.511	Neolamprologus_brichardi
ENSPMEG00000002425	-	100	83.186	ENSORLG00000008001	-	69	96.018	Oryzias_latipes
ENSPMEG00000002425	-	53	51.977	ENSORLG00000029240	-	94	51.977	Oryzias_latipes
ENSPMEG00000002425	-	100	83.186	ENSORLG00020006582	hnrnpa1a	98	94.737	Oryzias_latipes_hni
ENSPMEG00000002425	-	53	51.977	ENSORLG00020022498	-	80	51.977	Oryzias_latipes_hni
ENSPMEG00000002425	-	52	51.724	ENSORLG00020006043	-	59	51.724	Oryzias_latipes_hni
ENSPMEG00000002425	-	100	83.481	ENSORLG00015022294	-	69	96.460	Oryzias_latipes_hsok
ENSPMEG00000002425	-	100	83.284	ENSOMEG00000015959	-	69	96.460	Oryzias_melastigma
ENSPMEG00000002425	-	53	59.538	ENSPMGG00000016392	-	93	59.538	Periophthalmus_magnuspinnatus
ENSPMEG00000002425	-	68	83.117	ENSPMGG00000011804	hnrnpa1a	79	88.889	Periophthalmus_magnuspinnatus
ENSPMEG00000002425	-	100	100.000	ENSPFOG00000001825	-	100	100.000	Poecilia_formosa
ENSPMEG00000002425	-	57	58.511	ENSPNYG00000020729	-	95	58.511	Pundamilia_nyererei
ENSPMEG00000002425	-	56	82.979	ENSPNAG00000007752	hnrnpa1a	93	74.138	Pygocentrus_nattereri
ENSPMEG00000002425	-	55	85.561	ENSPNAG00000021630	-	92	59.672	Pygocentrus_nattereri
ENSPMEG00000002425	-	62	90.995	ENSSMAG00000004641	hnrnpa1a	94	79.091	Scophthalmus_maximus
ENSPMEG00000002425	-	53	59.036	ENSSMAG00000010279	-	93	59.036	Scophthalmus_maximus
ENSPMEG00000002425	-	52	56.250	ENSSMAG00000010246	-	88	51.598	Scophthalmus_maximus
ENSPMEG00000002425	-	52	60.819	ENSSDUG00000002431	-	81	60.819	Seriola_dumerili
ENSPMEG00000002425	-	89	98.742	ENSSDUG00000013908	hnrnpa1a	98	82.909	Seriola_dumerili
ENSPMEG00000002425	-	89	78.175	ENSSLDG00000003718	hnrnpa1a	94	89.340	Seriola_lalandi_dorsalis
ENSPMEG00000002425	-	91	83.766	ENSSPAG00000018518	-	68	95.111	Stegastes_partitus
ENSPMEG00000002425	-	65	89.238	ENSTRUG00000020491	-	69	88.546	Takifugu_rubripes
ENSPMEG00000002425	-	69	53.913	ENSTNIG00000007398	-	84	55.708	Tetraodon_nigroviridis
ENSPMEG00000002425	-	81	82.909	ENSXCOG00000009001	-	99	82.182	Xiphophorus_couchianus
ENSPMEG00000002425	-	100	98.827	ENSXMAG00000008076	-	100	98.827	Xiphophorus_maculatus