EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSPMEG00000002603 (Gene tree)
Gene ID: 106911459
Gene Symbol: srrm1
Alias: -
Full Name: serine/arginine repetitive matrix protein 1-like
Gene Type: protein_coding
Species: Poecilia_mexicana
Status: putative
Strand: Plus strand
Length: 7451 bases
Position: chrLMXC01033512.1:20344-27794
Accession: 106911459
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSPMEP00000001655	PWI	PF01480.17	1.8e-11	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSPMET00000013835	-	3386	XM_014978260	ENSPMEP00000001655	794 (aa)	XP_014833746	-

Gene Model

Click here to download ENSPMEG00000002603's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSPMEG00000002603's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSPMEG00000002603	srrm1	96	73.563	ENSATEG00000007659	srrm1	89	75.641	Anabas_testudineus
ENSPMEG00000002603	srrm1	60	67.606	ENSCSEG00000000122	srrm1	57	68.725	Cynoglossus_semilaevis
ENSPMEG00000002603	srrm1	55	73.318	ENSGACG00000007266	srrm1	55	77.391	Gasterosteus_aculeatus
ENSPMEG00000002603	srrm1	60	63.136	ENSHCOG00000012829	srrm1	54	59.959	Hippocampus_comes
ENSPMEG00000002603	srrm1	96	66.137	ENSLBEG00000013936	srrm1	58	61.416	Labrus_bergylta
ENSPMEG00000002603	srrm1	96	73.677	ENSMAMG00000010305	srrm1	89	75.513	Mastacembelus_armatus
ENSPMEG00000002603	srrm1	51	73.632	ENSORLG00015014743	srrm1	89	70.437	Oryzias_latipes_hsok
ENSPMEG00000002603	srrm1	96	77.522	ENSSDUG00000012967	srrm1	89	78.205	Seriola_dumerili
ENSPMEG00000002603	srrm1	96	76.786	ENSSLDG00000012771	srrm1	89	77.209	Seriola_lalandi_dorsalis
ENSPMEG00000002603	srrm1	96	70.513	ENSTRUG00000002519	srrm1	56	68.247	Takifugu_rubripes
ENSPMEG00000002603	srrm1	96	65.000	ENSTNIG00000016909	srrm1	54	59.588	Tetraodon_nigroviridis
ENSPMEG00000002603	srrm1	97	94.330	ENSXMAG00000018863	srrm1	90	94.330	Xiphophorus_maculatus