EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSPMEG00000002674 (Gene tree)
Gene ID: 106929628
Gene Symbol: si:ch1073-335m2.2
Alias: -
Full Name: msx2-interacting protein-like
Gene Type: protein_coding
Species: Poecilia_mexicana
Status: putative
Strand: Minus strand
Length: 19982 bases
Position: chrKQ552133.1:47293-67274
Accession: 106929628
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSPMEP00000001725	RRM_1	PF00076.22	2.4e-42	1	3
ENSPMEP00000001725	RRM_1	PF00076.22	2.4e-42	2	3
ENSPMEP00000001725	RRM_1	PF00076.22	2.4e-42	3	3
ENSPMEP00000001721	RRM_1	PF00076.22	8.1e-29	1	2
ENSPMEP00000001721	RRM_1	PF00076.22	8.1e-29	2	2

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSPMET00000013728	-	11527	XM_015006691	ENSPMEP00000001721	3054 (aa)	XP_014862177	UPI00072DB614
ENSPMET00000013723	-	12040	XM_015006689	ENSPMEP00000001725	3155 (aa)	XP_014862175	UPI00072EE9AC

Gene Model

Click here to download ENSPMEG00000002674's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSPMEG00000002674's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSPMEG00000002674	si:ch1073-335m2.2	97	75.635	ENSPMEG00000006764	-	91	69.498

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSPMEG00000002674	si:ch1073-335m2.2	76	84.615	ENSG00000065526	SPEN	85	81.349	Homo_sapiens
ENSPMEG00000002674	si:ch1073-335m2.2	100	73.534	ENSAPOG00000011411	si:ch1073-335m2.2	100	73.503	Acanthochromis_polyacanthus
ENSPMEG00000002674	si:ch1073-335m2.2	99	79.070	ENSAPOG00000009853	-	98	76.650	Acanthochromis_polyacanthus
ENSPMEG00000002674	si:ch1073-335m2.2	99	78.919	ENSAOCG00000014505	-	93	76.650	Amphiprion_ocellaris
ENSPMEG00000002674	si:ch1073-335m2.2	92	71.251	ENSAOCG00000008077	si:ch1073-335m2.2	99	71.251	Amphiprion_ocellaris
ENSPMEG00000002674	si:ch1073-335m2.2	99	78.919	ENSAPEG00000010288	-	93	76.650	Amphiprion_percula
ENSPMEG00000002674	si:ch1073-335m2.2	100	73.409	ENSAPEG00000013515	si:ch1073-335m2.2	100	73.378	Amphiprion_percula
ENSPMEG00000002674	si:ch1073-335m2.2	99	80.233	ENSATEG00000005627	-	98	75.862	Anabas_testudineus
ENSPMEG00000002674	si:ch1073-335m2.2	100	70.767	ENSATEG00000007674	si:ch1073-335m2.2	100	70.841	Anabas_testudineus
ENSPMEG00000002674	si:ch1073-335m2.2	93	85.799	ENSAPLG00000012618	SPEN	84	85.799	Anas_platyrhynchos
ENSPMEG00000002674	si:ch1073-335m2.2	72	85.799	ENSACAG00000013761	SPEN	69	85.799	Anolis_carolinensis
ENSPMEG00000002674	si:ch1073-335m2.2	75	84.615	ENSANAG00000034428	SPEN	58	84.615	Aotus_nancymaae
ENSPMEG00000002674	si:ch1073-335m2.2	100	70.034	ENSACLG00000021433	si:ch1073-335m2.2	100	69.831	Astatotilapia_calliptera
ENSPMEG00000002674	si:ch1073-335m2.2	98	77.838	ENSACLG00000016922	-	97	77.838	Astatotilapia_calliptera
ENSPMEG00000002674	si:ch1073-335m2.2	99	78.610	ENSAMXG00000012485	spen	98	78.610	Astyanax_mexicanus
ENSPMEG00000002674	si:ch1073-335m2.2	65	76.119	ENSBTAG00000018729	SPEN	57	76.119	Bos_taurus
ENSPMEG00000002674	si:ch1073-335m2.2	76	85.207	ENSCJAG00000008527	SPEN	58	85.207	Callithrix_jacchus
ENSPMEG00000002674	si:ch1073-335m2.2	64	85.799	ENSCHIG00000025070	SPEN	60	85.799	Capra_hircus
ENSPMEG00000002674	si:ch1073-335m2.2	50	75.124	ENSCAPG00000013803	SPEN	74	75.124	Cavia_aperea
ENSPMEG00000002674	si:ch1073-335m2.2	50	75.124	ENSCPOG00000014036	SPEN	61	75.124	Cavia_porcellus
ENSPMEG00000002674	si:ch1073-335m2.2	68	85.207	ENSCCAG00000020258	SPEN	57	85.207	Cebus_capucinus
ENSPMEG00000002674	si:ch1073-335m2.2	54	74.627	ENSCLAG00000002018	SPEN	86	74.627	Chinchilla_lanigera
ENSPMEG00000002674	si:ch1073-335m2.2	85	85.207	ENSCSAG00000000841	SPEN	59	85.207	Chlorocebus_sabaeus
ENSPMEG00000002674	si:ch1073-335m2.2	95	85.799	ENSCPBG00000010477	SPEN	88	85.799	Chrysemys_picta_bellii
ENSPMEG00000002674	si:ch1073-335m2.2	76	85.207	ENSCANG00000034547	SPEN	58	85.207	Colobus_angolensis_palliatus
ENSPMEG00000002674	si:ch1073-335m2.2	100	64.143	ENSCSEG00000003915	-	98	64.143	Cynoglossus_semilaevis
ENSPMEG00000002674	si:ch1073-335m2.2	99	82.840	ENSCVAG00000016346	-	50	82.840	Cyprinodon_variegatus
ENSPMEG00000002674	si:ch1073-335m2.2	100	81.090	ENSCVAG00000009075	si:ch1073-335m2.2	100	81.234	Cyprinodon_variegatus
ENSPMEG00000002674	si:ch1073-335m2.2	100	52.993	ENSDARG00000074332	si:ch1073-335m2.2	100	52.891	Danio_rerio
ENSPMEG00000002674	si:ch1073-335m2.2	54	73.786	ENSDARG00000074245	spen	100	82.222	Danio_rerio
ENSPMEG00000002674	si:ch1073-335m2.2	94	85.207	ENSDORG00000023909	Spen	77	85.207	Dipodomys_ordii
ENSPMEG00000002674	si:ch1073-335m2.2	82	85.799	ENSEASG00005015911	SPEN	55	85.799	Equus_asinus_asinus
ENSPMEG00000002674	si:ch1073-335m2.2	57	83.721	ENSEEUG00000010255	SPEN	57	83.721	Erinaceus_europaeus
ENSPMEG00000002674	si:ch1073-335m2.2	100	58.966	ENSELUG00000007726	si:ch1073-335m2.2	100	59.030	Esox_lucius
ENSPMEG00000002674	si:ch1073-335m2.2	54	85.207	ENSFALG00000003551	SPEN	56	85.207	Ficedula_albicollis
ENSPMEG00000002674	si:ch1073-335m2.2	75	84.615	ENSFDAG00000010212	SPEN	65	84.615	Fukomys_damarensis
ENSPMEG00000002674	si:ch1073-335m2.2	100	81.425	ENSFHEG00000004544	si:ch1073-335m2.2	100	81.268	Fundulus_heteroclitus
ENSPMEG00000002674	si:ch1073-335m2.2	100	62.303	ENSGMOG00000008156	si:ch1073-335m2.2	100	61.938	Gadus_morhua
ENSPMEG00000002674	si:ch1073-335m2.2	71	85.207	ENSGALG00000036932	SPEN	63	85.207	Gallus_gallus
ENSPMEG00000002674	si:ch1073-335m2.2	96	82.840	ENSGAFG00000015819	-	96	82.840	Gambusia_affinis
ENSPMEG00000002674	si:ch1073-335m2.2	100	94.147	ENSGAFG00000021570	si:ch1073-335m2.2	100	94.053	Gambusia_affinis
ENSPMEG00000002674	si:ch1073-335m2.2	100	67.670	ENSGACG00000001176	si:ch1073-335m2.2	100	67.164	Gasterosteus_aculeatus
ENSPMEG00000002674	si:ch1073-335m2.2	75	78.919	ENSGACG00000005341	-	70	78.075	Gasterosteus_aculeatus
ENSPMEG00000002674	si:ch1073-335m2.2	86	85.799	ENSGAGG00000020785	SPEN	61	85.799	Gopherus_agassizii
ENSPMEG00000002674	si:ch1073-335m2.2	76	84.615	ENSGGOG00000012041	SPEN	59	84.615	Gorilla_gorilla
ENSPMEG00000002674	si:ch1073-335m2.2	99	73.114	ENSHBUG00000023253	si:ch1073-335m2.2	100	73.063	Haplochromis_burtoni
ENSPMEG00000002674	si:ch1073-335m2.2	98	78.378	ENSHBUG00000020626	-	51	78.378	Haplochromis_burtoni
ENSPMEG00000002674	si:ch1073-335m2.2	68	75.622	ENSHGLG00000019259	SPEN	60	75.622	Heterocephalus_glaber_female
ENSPMEG00000002674	si:ch1073-335m2.2	63	75.622	ENSHGLG00100019294	SPEN	59	75.622	Heterocephalus_glaber_male
ENSPMEG00000002674	si:ch1073-335m2.2	98	65.224	ENSHCOG00000006004	si:ch1073-335m2.2	99	65.583	Hippocampus_comes
ENSPMEG00000002674	si:ch1073-335m2.2	100	53.082	ENSIPUG00000018212	si:ch1073-335m2.2	99	53.325	Ictalurus_punctatus
ENSPMEG00000002674	si:ch1073-335m2.2	100	74.742	ENSIPUG00000021668	spen	52	74.742	Ictalurus_punctatus
ENSPMEG00000002674	si:ch1073-335m2.2	86	84.615	ENSJJAG00000010882	Spen	91	84.615	Jaculus_jaculus
ENSPMEG00000002674	si:ch1073-335m2.2	99	79.070	ENSKMAG00000003882	-	98	74.627	Kryptolebias_marmoratus
ENSPMEG00000002674	si:ch1073-335m2.2	100	74.099	ENSKMAG00000021725	si:ch1073-335m2.2	100	73.858	Kryptolebias_marmoratus
ENSPMEG00000002674	si:ch1073-335m2.2	100	69.559	ENSLBEG00000020855	si:ch1073-335m2.2	100	69.449	Labrus_bergylta
ENSPMEG00000002674	si:ch1073-335m2.2	85	81.065	ENSLBEG00000019129	-	90	73.604	Labrus_bergylta
ENSPMEG00000002674	si:ch1073-335m2.2	100	44.120	ENSLACG00000003258	SPEN	89	85.207	Latimeria_chalumnae
ENSPMEG00000002674	si:ch1073-335m2.2	100	73.529	ENSLOCG00000007896	si:ch1073-335m2.2	93	75.862	Lepisosteus_oculatus
ENSPMEG00000002674	si:ch1073-335m2.2	92	76.617	ENSLAFG00000004524	SPEN	83	76.617	Loxodonta_africana
ENSPMEG00000002674	si:ch1073-335m2.2	64	85.207	ENSMFAG00000041974	SPEN	58	85.207	Macaca_fascicularis
ENSPMEG00000002674	si:ch1073-335m2.2	100	71.137	ENSMAMG00000023870	si:ch1073-335m2.2	100	71.241	Mastacembelus_armatus
ENSPMEG00000002674	si:ch1073-335m2.2	100	70.012	ENSMZEG00005011762	si:ch1073-335m2.2	100	69.871	Maylandia_zebra
ENSPMEG00000002674	si:ch1073-335m2.2	79	68.376	ENSMAUG00000008318	Spen	87	68.376	Mesocricetus_auratus
ENSPMEG00000002674	si:ch1073-335m2.2	86	85.207	ENSMICG00000030994	SPEN	60	85.207	Microcebus_murinus
ENSPMEG00000002674	si:ch1073-335m2.2	54	85.207	ENSMOCG00000016083	Spen	79	85.207	Microtus_ochrogaster
ENSPMEG00000002674	si:ch1073-335m2.2	100	69.034	ENSMMOG00000021742	si:ch1073-335m2.2	100	68.540	Mola_mola
ENSPMEG00000002674	si:ch1073-335m2.2	90	81.065	ENSMODG00000003411	SPEN	85	81.065	Monodelphis_domestica
ENSPMEG00000002674	si:ch1073-335m2.2	100	78.378	ENSMALG00000008625	-	98	74.384	Monopterus_albus
ENSPMEG00000002674	si:ch1073-335m2.2	76	85.207	MGP_CAROLIEiJ_G0026745	Spen	72	85.207	Mus_caroli
ENSPMEG00000002674	si:ch1073-335m2.2	77	75.743	ENSMUSG00000040761	Spen	72	75.743	Mus_musculus
ENSPMEG00000002674	si:ch1073-335m2.2	76	85.207	MGP_PahariEiJ_G0029076	Spen	84	85.207	Mus_pahari
ENSPMEG00000002674	si:ch1073-335m2.2	77	75.743	MGP_SPRETEiJ_G0027724	Spen	72	75.743	Mus_spretus
ENSPMEG00000002674	si:ch1073-335m2.2	62	85.207	ENSMPUG00000016317	SPEN	53	85.207	Mustela_putorius_furo
ENSPMEG00000002674	si:ch1073-335m2.2	52	82.292	ENSMLUG00000010144	SPEN	99	67.286	Myotis_lucifugus
ENSPMEG00000002674	si:ch1073-335m2.2	90	75.124	ENSNGAG00000000641	Spen	87	75.124	Nannospalax_galili
ENSPMEG00000002674	si:ch1073-335m2.2	100	69.205	ENSNBRG00000005733	si:ch1073-335m2.2	100	69.063	Neolamprologus_brichardi
ENSPMEG00000002674	si:ch1073-335m2.2	75	84.615	ENSNLEG00000007652	SPEN	58	84.615	Nomascus_leucogenys
ENSPMEG00000002674	si:ch1073-335m2.2	76	80.000	ENSMEUG00000002422	SPEN	70	80.000	Notamacropus_eugenii
ENSPMEG00000002674	si:ch1073-335m2.2	73	76.119	ENSOPRG00000015800	SPEN	67	76.119	Ochotona_princeps
ENSPMEG00000002674	si:ch1073-335m2.2	77	74.627	ENSODEG00000016644	SPEN	60	74.627	Octodon_degus
ENSPMEG00000002674	si:ch1073-335m2.2	100	78.378	ENSONIG00000006573	-	99	71.790	Oreochromis_niloticus
ENSPMEG00000002674	si:ch1073-335m2.2	100	70.059	ENSORLG00000018414	si:ch1073-335m2.2	100	70.071	Oryzias_latipes
ENSPMEG00000002674	si:ch1073-335m2.2	90	37.703	ENSORLG00000028894	-	93	45.508	Oryzias_latipes
ENSPMEG00000002674	si:ch1073-335m2.2	90	37.516	ENSORLG00020007735	-	93	45.238	Oryzias_latipes_hni
ENSPMEG00000002674	si:ch1073-335m2.2	100	70.028	ENSORLG00020009351	si:ch1073-335m2.2	100	70.009	Oryzias_latipes_hni
ENSPMEG00000002674	si:ch1073-335m2.2	68	65.714	ENSORLG00015022085	-	87	61.761	Oryzias_latipes_hsok
ENSPMEG00000002674	si:ch1073-335m2.2	100	69.811	ENSORLG00015005537	si:ch1073-335m2.2	100	69.824	Oryzias_latipes_hsok
ENSPMEG00000002674	si:ch1073-335m2.2	100	71.194	ENSOMEG00000004509	si:ch1073-335m2.2	100	71.287	Oryzias_melastigma
ENSPMEG00000002674	si:ch1073-335m2.2	98	62.222	ENSOMEG00000007639	-	75	63.474	Oryzias_melastigma
ENSPMEG00000002674	si:ch1073-335m2.2	85	85.207	ENSPANG00000006293	SPEN	55	85.207	Papio_anubis
ENSPMEG00000002674	si:ch1073-335m2.2	97	92.857	ENSPKIG00000010492	si:ch1073-335m2.2	98	92.857	Paramormyrops_kingsleyae
ENSPMEG00000002674	si:ch1073-335m2.2	100	78.756	ENSPKIG00000002617	SPEN	91	69.697	Paramormyrops_kingsleyae
ENSPMEG00000002674	si:ch1073-335m2.2	51	85.799	ENSPSIG00000008026	SPEN	88	78.238	Pelodiscus_sinensis
ENSPMEG00000002674	si:ch1073-335m2.2	62	85.207	ENSPEMG00000022997	Spen	85	85.207	Peromyscus_maniculatus_bairdii
ENSPMEG00000002674	si:ch1073-335m2.2	100	99.049	ENSPFOG00000017986	si:ch1073-335m2.2	100	99.049	Poecilia_formosa
ENSPMEG00000002674	si:ch1073-335m2.2	100	98.037	ENSPLAG00000016625	si:ch1073-335m2.2	100	98.037	Poecilia_latipinna
ENSPMEG00000002674	si:ch1073-335m2.2	100	97.408	ENSPREG00000005357	si:ch1073-335m2.2	100	97.408	Poecilia_reticulata
ENSPMEG00000002674	si:ch1073-335m2.2	97	75.635	ENSPREG00000010399	-	91	69.884	Poecilia_reticulata
ENSPMEG00000002674	si:ch1073-335m2.2	74	84.615	ENSPPYG00000001834	SPEN	55	84.615	Pongo_abelii
ENSPMEG00000002674	si:ch1073-335m2.2	70	75.622	ENSPCAG00000009543	SPEN	50	75.622	Procavia_capensis
ENSPMEG00000002674	si:ch1073-335m2.2	63	83.432	ENSPVAG00000013794	SPEN	57	83.432	Pteropus_vampyrus
ENSPMEG00000002674	si:ch1073-335m2.2	100	70.064	ENSPNYG00000009042	si:ch1073-335m2.2	100	69.862	Pundamilia_nyererei
ENSPMEG00000002674	si:ch1073-335m2.2	98	78.378	ENSPNYG00000012379	-	51	78.378	Pundamilia_nyererei
ENSPMEG00000002674	si:ch1073-335m2.2	99	78.035	ENSPNAG00000020795	spen	88	67.925	Pygocentrus_nattereri
ENSPMEG00000002674	si:ch1073-335m2.2	100	55.668	ENSPNAG00000011452	si:ch1073-335m2.2	100	55.473	Pygocentrus_nattereri
ENSPMEG00000002674	si:ch1073-335m2.2	87	76.119	ENSRNOG00000033556	Spen	85	76.119	Rattus_norvegicus
ENSPMEG00000002674	si:ch1073-335m2.2	75	85.207	ENSRBIG00000039654	SPEN	59	85.207	Rhinopithecus_bieti
ENSPMEG00000002674	si:ch1073-335m2.2	75	85.207	ENSRROG00000035686	SPEN	58	85.207	Rhinopithecus_roxellana
ENSPMEG00000002674	si:ch1073-335m2.2	75	85.207	ENSSBOG00000028770	SPEN	60	85.207	Saimiri_boliviensis_boliviensis
ENSPMEG00000002674	si:ch1073-335m2.2	94	72.277	ENSSHAG00000004960	SPEN	99	68.401	Sarcophilus_harrisii
ENSPMEG00000002674	si:ch1073-335m2.2	90	86.391	ENSSFOG00015007131	si:ch1073-335m2.2	97	86.391	Scleropages_formosus
ENSPMEG00000002674	si:ch1073-335m2.2	99	87.574	ENSSFOG00015010267	si:ch1073-335m2.2	98	87.574	Scleropages_formosus
ENSPMEG00000002674	si:ch1073-335m2.2	99	79.459	ENSSMAG00000008996	-	92	78.610	Scophthalmus_maximus
ENSPMEG00000002674	si:ch1073-335m2.2	100	71.354	ENSSMAG00000000125	si:ch1073-335m2.2	100	71.363	Scophthalmus_maximus
ENSPMEG00000002674	si:ch1073-335m2.2	99	80.233	ENSSDUG00000003476	-	98	77.665	Seriola_dumerili
ENSPMEG00000002674	si:ch1073-335m2.2	100	73.820	ENSSDUG00000008416	si:ch1073-335m2.2	100	73.774	Seriola_dumerili
ENSPMEG00000002674	si:ch1073-335m2.2	99	80.000	ENSSLDG00000012950	-	98	77.665	Seriola_lalandi_dorsalis
ENSPMEG00000002674	si:ch1073-335m2.2	58	85.799	ENSSPUG00000001866	-	60	85.799	Sphenodon_punctatus
ENSPMEG00000002674	si:ch1073-335m2.2	100	73.882	ENSSPAG00000012454	si:ch1073-335m2.2	100	73.744	Stegastes_partitus
ENSPMEG00000002674	si:ch1073-335m2.2	99	79.070	ENSSPAG00000006014	-	98	77.540	Stegastes_partitus
ENSPMEG00000002674	si:ch1073-335m2.2	78	44.702	ENSSSCG00000034484	SPEN	57	59.350	Sus_scrofa
ENSPMEG00000002674	si:ch1073-335m2.2	90	63.242	ENSTRUG00000021008	si:ch1073-335m2.2	100	62.995	Takifugu_rubripes
ENSPMEG00000002674	si:ch1073-335m2.2	100	73.892	ENSTRUG00000024350	-	98	73.892	Takifugu_rubripes
ENSPMEG00000002674	si:ch1073-335m2.2	99	79.121	ENSTNIG00000010907	-	50	71.292	Tetraodon_nigroviridis
ENSPMEG00000002674	si:ch1073-335m2.2	68	85.207	ENSTBEG00000003628	SPEN	61	85.207	Tupaia_belangeri
ENSPMEG00000002674	si:ch1073-335m2.2	64	85.799	ENSUAMG00000009600	SPEN	55	85.799	Ursus_americanus
ENSPMEG00000002674	si:ch1073-335m2.2	64	85.799	ENSUMAG00000021641	SPEN	54	85.799	Ursus_maritimus
ENSPMEG00000002674	si:ch1073-335m2.2	81	85.207	ENSVVUG00000028951	SPEN	51	92.857	Vulpes_vulpes
ENSPMEG00000002674	si:ch1073-335m2.2	52	84.615	ENSXETG00000023114	SPEN	70	84.615	Xenopus_tropicalis
ENSPMEG00000002674	si:ch1073-335m2.2	99	92.841	ENSXCOG00000004516	si:ch1073-335m2.2	100	90.900	Xiphophorus_couchianus
ENSPMEG00000002674	si:ch1073-335m2.2	100	94.905	ENSXMAG00000029887	si:ch1073-335m2.2	100	94.589	Xiphophorus_maculatus
ENSPMEG00000002674	si:ch1073-335m2.2	98	82.249	ENSXMAG00000021384	-	91	69.732	Xiphophorus_maculatus