EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSPMEG00000002757 (Gene tree)
Gene ID: 106930372
Gene Symbol: srsf7a
Alias: -
Full Name: serine/arginine-rich splicing factor 7-like
Gene Type: protein_coding
Species: Poecilia_mexicana
Status: putative
Strand: Plus strand
Length: 8534 bases
Position: chrKQ552213.1:114877-123410
Accession: 106930372
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSPMEP00000001790	RRM_1	PF00076.22	1.2e-15	1	1
ENSPMEP00000001786	RRM_1	PF00076.22	1.4e-15	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSPMET00000013615	-	1037	XM_015007867	ENSPMEP00000001786	257 (aa)	XP_014863353	UPI000443B4BD
ENSPMET00000013608	-	3630	XM_015007870	ENSPMEP00000001790	243 (aa)	XP_014863356	UPI0004441DCB

Gene Model

Click here to download ENSPMEG00000002757's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSPMEG00000002757's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSPMEG00000002757	srsf7a	62	48.344	ENSAMEG00000000268	SRSF3	69	48.052	Ailuropoda_melanoleuca
ENSPMEG00000002757	srsf7a	61	53.333	ENSACIG00000016419	-	56	74.118	Amphilophus_citrinellus
ENSPMEG00000002757	srsf7a	61	50.000	ENSATEG00000006193	srsf3b	63	71.277	Anabas_testudineus
ENSPMEG00000002757	srsf7a	89	64.091	ENSAMXG00000007005	srsf7b	54	74.336	Astyanax_mexicanus
ENSPMEG00000002757	srsf7a	50	57.600	ENSCAFG00020013547	-	69	58.559	Canis_lupus_dingo
ENSPMEG00000002757	srsf7a	65	50.943	ENSCSAG00000010291	SRSF3	52	74.118	Chlorocebus_sabaeus
ENSPMEG00000002757	srsf7a	64	51.250	ENSCSAVG00000007369	-	68	50.820	Ciona_savignyi
ENSPMEG00000002757	srsf7a	62	54.605	ENSCSEG00000002271	srsf3b	72	68.421	Cynoglossus_semilaevis
ENSPMEG00000002757	srsf7a	56	91.971	ENSCSEG00000006378	srsf7a	79	97.297	Cynoglossus_semilaevis
ENSPMEG00000002757	srsf7a	100	95.753	ENSCVAG00000020083	srsf7a	100	95.753	Cyprinodon_variegatus
ENSPMEG00000002757	srsf7a	55	56.296	ENSCVAG00000009865	-	56	74.118	Cyprinodon_variegatus
ENSPMEG00000002757	srsf7a	94	75.000	ENSDARG00000035325	srsf7a	85	93.548	Danio_rerio
ENSPMEG00000002757	srsf7a	63	52.469	ENSEBUG00000002677	-	56	67.442	Eptatretus_burgeri
ENSPMEG00000002757	srsf7a	78	62.559	ENSELUG00000018155	srsf7b	80	75.676	Esox_lucius
ENSPMEG00000002757	srsf7a	64	52.410	ENSELUG00000014357	SRSF3	58	69.149	Esox_lucius
ENSPMEG00000002757	srsf7a	50	99.180	ENSFHEG00000007159	srsf7a	66	99.180	Fundulus_heteroclitus
ENSPMEG00000002757	srsf7a	100	79.268	ENSGMOG00000002004	srsf7a	53	93.496	Gadus_morhua
ENSPMEG00000002757	srsf7a	68	69.048	ENSGALG00000033120	SRSF7	82	78.378	Gallus_gallus
ENSPMEG00000002757	srsf7a	100	98.833	ENSGAFG00000002177	srsf7a	100	98.833	Gambusia_affinis
ENSPMEG00000002757	srsf7a	60	51.351	ENSHCOG00000017795	-	51	70.588	Hippocampus_comes
ENSPMEG00000002757	srsf7a	57	57.143	ENSJJAG00000020230	-	68	62.162	Jaculus_jaculus
ENSPMEG00000002757	srsf7a	62	51.316	ENSLBEG00000013364	srsf3b	73	72.941	Labrus_bergylta
ENSPMEG00000002757	srsf7a	70	73.684	ENSLACG00000018688	srsf7a	54	86.607	Latimeria_chalumnae
ENSPMEG00000002757	srsf7a	58	53.472	ENSMAUG00000021932	-	54	62.385	Mesocricetus_auratus
ENSPMEG00000002757	srsf7a	71	45.665	ENSMAUG00000011430	-	54	60.241	Mesocricetus_auratus
ENSPMEG00000002757	srsf7a	59	48.611	ENSMOCG00000014206	-	87	47.682	Microtus_ochrogaster
ENSPMEG00000002757	srsf7a	62	51.974	ENSMMOG00000021774	srsf3b	54	68.421	Mola_mola
ENSPMEG00000002757	srsf7a	51	95.200	ENSMMOG00000005208	srsf7a	74	98.198	Mola_mola
ENSPMEG00000002757	srsf7a	65	52.201	ENSMLUG00000010671	-	52	74.118	Myotis_lucifugus
ENSPMEG00000002757	srsf7a	67	97.531	ENSNBRG00000006601	srsf7a	73	99.099	Neolamprologus_brichardi
ENSPMEG00000002757	srsf7a	65	50.296	ENSORLG00015004309	srsf3b	51	74.118	Oryzias_latipes_hsok
ENSPMEG00000002757	srsf7a	62	49.342	ENSOMEG00000014893	srsf3b	64	69.072	Oryzias_melastigma
ENSPMEG00000002757	srsf7a	54	71.642	ENSPKIG00000017425	srsf7b	63	77.477	Paramormyrops_kingsleyae
ENSPMEG00000002757	srsf7a	50	67.480	ENSPMAG00000004472	srsf7a	54	72.642	Petromyzon_marinus
ENSPMEG00000002757	srsf7a	65	67.925	ENSPCIG00000020694	-	81	77.477	Phascolarctos_cinereus
ENSPMEG00000002757	srsf7a	100	100.000	ENSPFOG00000017803	srsf7a	100	100.000	Poecilia_formosa
ENSPMEG00000002757	srsf7a	100	99.588	ENSPLAG00000004839	srsf7a	100	99.588	Poecilia_latipinna
ENSPMEG00000002757	srsf7a	52	98.413	ENSPREG00000020685	srsf7a	99	98.413	Poecilia_reticulata
ENSPMEG00000002757	srsf7a	65	62.500	ENSRNOG00000008398	AABR07055789.1	67	67.568	Rattus_norvegicus
ENSPMEG00000002757	srsf7a	62	53.289	ENSSMAG00000000387	srsf3b	60	69.072	Scophthalmus_maximus
ENSPMEG00000002757	srsf7a	50	72.581	ENSSDUG00000021338	srsf7b	78	75.676	Seriola_dumerili
ENSPMEG00000002757	srsf7a	79	54.639	ENSSPAG00000017204	srsf7b	79	75.676	Stegastes_partitus
ENSPMEG00000002757	srsf7a	53	96.875	ENSSPAG00000022192	srsf7a	98	96.748	Stegastes_partitus
ENSPMEG00000002757	srsf7a	60	53.691	ENSVVUG00000006092	-	69	65.278	Vulpes_vulpes
ENSPMEG00000002757	srsf7a	52	98.413	ENSXCOG00000009381	srsf7a	99	98.413	Xiphophorus_couchianus
ENSPMEG00000002757	srsf7a	100	99.611	ENSXMAG00000003050	srsf7a	100	99.611	Xiphophorus_maculatus