EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSPMEG00000002910 (Gene tree)
Gene ID: 106915202
Gene Symbol: rpusd1
Alias: -
Full Name: RNA pseudouridine synthase domain containing 1
Gene Type: protein_coding
Species: Poecilia_mexicana
Status: putative
Strand: Minus strand
Length: 3761 bases
Position: chrKQ551134.1:99455-103215
Accession: 106915202
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSPMEP00000001938	PseudoU_synth_2	PF00849.22	2.4e-23	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSPMET00000013367	-	1894	XM_014982646	ENSPMEP00000001938	303 (aa)	XP_014838132	UPI00072EBD52

Gene Model

Click here to download ENSPMEG00000002910's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSPMEG00000002910's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSPMEG00000002910	rpusd1	98	56.721	ENSG00000007376	RPUSD1	99	65.868	Homo_sapiens
ENSPMEG00000002910	rpusd1	100	80.392	ENSAPOG00000022221	rpusd1	99	80.906	Acanthochromis_polyacanthus
ENSPMEG00000002910	rpusd1	98	58.863	ENSAMEG00000007461	RPUSD1	98	58.863	Ailuropoda_melanoleuca
ENSPMEG00000002910	rpusd1	100	78.846	ENSACIG00000015863	rpusd1	100	80.000	Amphilophus_citrinellus
ENSPMEG00000002910	rpusd1	100	81.877	ENSAOCG00000021975	rpusd1	97	81.877	Amphiprion_ocellaris
ENSPMEG00000002910	rpusd1	100	82.201	ENSAPEG00000001316	rpusd1	97	82.201	Amphiprion_percula
ENSPMEG00000002910	rpusd1	100	76.375	ENSATEG00000002984	rpusd1	99	79.288	Anabas_testudineus
ENSPMEG00000002910	rpusd1	77	59.916	ENSAPLG00000012316	RPUSD1	98	59.916	Anas_platyrhynchos
ENSPMEG00000002910	rpusd1	98	63.545	ENSACAG00000008953	RPUSD1	99	63.545	Anolis_carolinensis
ENSPMEG00000002910	rpusd1	98	57.049	ENSANAG00000024709	RPUSD1	98	57.049	Aotus_nancymaae
ENSPMEG00000002910	rpusd1	100	79.100	ENSACLG00000013692	rpusd1	100	79.100	Astatotilapia_calliptera
ENSPMEG00000002910	rpusd1	99	70.333	ENSAMXG00000019802	rpusd1	99	70.333	Astyanax_mexicanus
ENSPMEG00000002910	rpusd1	98	59.468	ENSBTAG00000000179	RPUSD1	98	59.344	Bos_taurus
ENSPMEG00000002910	rpusd1	98	57.377	ENSCJAG00000012253	RPUSD1	98	57.377	Callithrix_jacchus
ENSPMEG00000002910	rpusd1	98	57.525	ENSCAFG00000019614	RPUSD1	98	58.528	Canis_familiaris
ENSPMEG00000002910	rpusd1	98	57.525	ENSCAFG00020008891	RPUSD1	98	58.528	Canis_lupus_dingo
ENSPMEG00000002910	rpusd1	98	59.801	ENSCHIG00000012872	RPUSD1	98	59.672	Capra_hircus
ENSPMEG00000002910	rpusd1	98	55.853	ENSTSYG00000036934	RPUSD1	98	55.853	Carlito_syrichta
ENSPMEG00000002910	rpusd1	98	57.860	ENSCAPG00000014219	RPUSD1	98	57.860	Cavia_aperea
ENSPMEG00000002910	rpusd1	98	57.860	ENSCPOG00000034604	RPUSD1	98	57.860	Cavia_porcellus
ENSPMEG00000002910	rpusd1	98	56.678	ENSCCAG00000034385	RPUSD1	98	57.377	Cebus_capucinus
ENSPMEG00000002910	rpusd1	98	57.190	ENSCATG00000042983	RPUSD1	98	57.516	Cercocebus_atys
ENSPMEG00000002910	rpusd1	98	56.856	ENSCLAG00000013966	RPUSD1	98	56.856	Chinchilla_lanigera
ENSPMEG00000002910	rpusd1	98	56.721	ENSCSAG00000012121	RPUSD1	98	57.049	Chlorocebus_sabaeus
ENSPMEG00000002910	rpusd1	98	62.791	ENSCPBG00000021101	RPUSD1	99	62.791	Chrysemys_picta_bellii
ENSPMEG00000002910	rpusd1	83	63.636	ENSCANG00000028576	RPUSD1	90	63.636	Colobus_angolensis_palliatus
ENSPMEG00000002910	rpusd1	98	58.553	ENSCGRG00001014253	Rpusd1	98	58.553	Cricetulus_griseus_chok1gshd
ENSPMEG00000002910	rpusd1	98	58.553	ENSCGRG00000017995	Rpusd1	98	58.553	Cricetulus_griseus_crigri
ENSPMEG00000002910	rpusd1	99	75.667	ENSCSEG00000018512	rpusd1	99	75.667	Cynoglossus_semilaevis
ENSPMEG00000002910	rpusd1	100	89.803	ENSCVAG00000022746	rpusd1	100	89.803	Cyprinodon_variegatus
ENSPMEG00000002910	rpusd1	98	71.141	ENSDARG00000060192	rpusd1	99	71.141	Danio_rerio
ENSPMEG00000002910	rpusd1	98	55.150	ENSDNOG00000003721	RPUSD1	98	55.150	Dasypus_novemcinctus
ENSPMEG00000002910	rpusd1	98	56.856	ENSDORG00000026656	Rpusd1	98	57.426	Dipodomys_ordii
ENSPMEG00000002910	rpusd1	96	46.254	ENSEBUG00000008767	rpusd1	92	46.254	Eptatretus_burgeri
ENSPMEG00000002910	rpusd1	98	55.987	ENSEASG00005018421	RPUSD1	74	55.987	Equus_asinus_asinus
ENSPMEG00000002910	rpusd1	100	68.471	ENSELUG00000014307	rpusd1	90	69.805	Esox_lucius
ENSPMEG00000002910	rpusd1	98	58.528	ENSFCAG00000010359	RPUSD1	98	58.528	Felis_catus
ENSPMEG00000002910	rpusd1	98	65.772	ENSFALG00000003211	RPUSD1	99	65.772	Ficedula_albicollis
ENSPMEG00000002910	rpusd1	98	57.191	ENSFDAG00000013398	RPUSD1	98	57.191	Fukomys_damarensis
ENSPMEG00000002910	rpusd1	100	86.971	ENSFHEG00000004736	rpusd1	100	89.902	Fundulus_heteroclitus
ENSPMEG00000002910	rpusd1	99	71.010	ENSGMOG00000010756	rpusd1	99	72.313	Gadus_morhua
ENSPMEG00000002910	rpusd1	98	64.356	ENSGALG00000005315	RPUSD1	99	64.356	Gallus_gallus
ENSPMEG00000002910	rpusd1	100	94.737	ENSGAFG00000009886	rpusd1	100	94.737	Gambusia_affinis
ENSPMEG00000002910	rpusd1	100	73.633	ENSGACG00000014276	rpusd1	100	77.670	Gasterosteus_aculeatus
ENSPMEG00000002910	rpusd1	98	62.458	ENSGAGG00000004181	RPUSD1	99	62.458	Gopherus_agassizii
ENSPMEG00000002910	rpusd1	98	57.516	ENSGGOG00000013997	RPUSD1	98	57.516	Gorilla_gorilla
ENSPMEG00000002910	rpusd1	100	79.421	ENSHBUG00000023728	rpusd1	100	79.421	Haplochromis_burtoni
ENSPMEG00000002910	rpusd1	98	56.856	ENSHGLG00000002595	RPUSD1	98	56.856	Heterocephalus_glaber_female
ENSPMEG00000002910	rpusd1	98	56.856	ENSHGLG00100014303	RPUSD1	98	56.856	Heterocephalus_glaber_male
ENSPMEG00000002910	rpusd1	99	73.115	ENSHCOG00000002390	rpusd1	99	73.115	Hippocampus_comes
ENSPMEG00000002910	rpusd1	98	66.779	ENSIPUG00000001570	rpusd1	98	67.000	Ictalurus_punctatus
ENSPMEG00000002910	rpusd1	98	57.191	ENSSTOG00000004276	RPUSD1	98	57.191	Ictidomys_tridecemlineatus
ENSPMEG00000002910	rpusd1	98	58.000	ENSJJAG00000015696	Rpusd1	98	58.086	Jaculus_jaculus
ENSPMEG00000002910	rpusd1	99	85.149	ENSKMAG00000017287	rpusd1	99	85.149	Kryptolebias_marmoratus
ENSPMEG00000002910	rpusd1	100	76.052	ENSLBEG00000013354	RPUSD1	99	77.670	Labrus_bergylta
ENSPMEG00000002910	rpusd1	100	76.052	ENSLBEG00000022502	rpusd1	99	77.670	Labrus_bergylta
ENSPMEG00000002910	rpusd1	98	64.026	ENSLACG00000008869	RPUSD1	99	64.026	Latimeria_chalumnae
ENSPMEG00000002910	rpusd1	71	82.243	ENSLOCG00000005682	rpusd1	99	82.243	Lepisosteus_oculatus
ENSPMEG00000002910	rpusd1	98	56.522	ENSLAFG00000002115	RPUSD1	98	56.522	Loxodonta_africana
ENSPMEG00000002910	rpusd1	98	57.190	ENSMFAG00000003961	RPUSD1	98	57.516	Macaca_fascicularis
ENSPMEG00000002910	rpusd1	98	57.190	ENSMMUG00000000842	RPUSD1	98	57.516	Macaca_mulatta
ENSPMEG00000002910	rpusd1	98	57.190	ENSMNEG00000042712	RPUSD1	98	57.516	Macaca_nemestrina
ENSPMEG00000002910	rpusd1	98	57.190	ENSMLEG00000030591	RPUSD1	98	57.516	Mandrillus_leucophaeus
ENSPMEG00000002910	rpusd1	100	80.000	ENSMAMG00000004735	rpusd1	99	81.613	Mastacembelus_armatus
ENSPMEG00000002910	rpusd1	100	79.100	ENSMZEG00005003214	rpusd1	100	79.100	Maylandia_zebra
ENSPMEG00000002910	rpusd1	96	64.646	ENSMGAG00000005447	RPUSD1	98	64.646	Meleagris_gallopavo
ENSPMEG00000002910	rpusd1	83	56.522	ENSMAUG00000019998	Rpusd1	96	56.522	Mesocricetus_auratus
ENSPMEG00000002910	rpusd1	98	57.000	ENSMICG00000017561	RPUSD1	98	57.000	Microcebus_murinus
ENSPMEG00000002910	rpusd1	98	57.860	ENSMOCG00000014082	Rpusd1	98	59.000	Microtus_ochrogaster
ENSPMEG00000002910	rpusd1	99	74.510	ENSMMOG00000012569	rpusd1	99	75.410	Mola_mola
ENSPMEG00000002910	rpusd1	99	62.376	ENSMODG00000016882	RPUSD1	99	62.376	Monodelphis_domestica
ENSPMEG00000002910	rpusd1	100	77.419	ENSMALG00000017818	rpusd1	99	79.677	Monopterus_albus
ENSPMEG00000002910	rpusd1	98	58.194	MGP_CAROLIEiJ_G0021244	Rpusd1	98	58.416	Mus_caroli
ENSPMEG00000002910	rpusd1	98	57.860	ENSMUSG00000041199	Rpusd1	98	58.416	Mus_musculus
ENSPMEG00000002910	rpusd1	98	57.377	MGP_PahariEiJ_G0023562	Rpusd1	98	58.361	Mus_pahari
ENSPMEG00000002910	rpusd1	98	57.860	MGP_SPRETEiJ_G0022155	Rpusd1	98	58.416	Mus_spretus
ENSPMEG00000002910	rpusd1	96	57.483	ENSMPUG00000015897	RPUSD1	96	57.483	Mustela_putorius_furo
ENSPMEG00000002910	rpusd1	98	57.895	ENSMLUG00000001089	RPUSD1	98	57.895	Myotis_lucifugus
ENSPMEG00000002910	rpusd1	98	56.856	ENSNGAG00000003595	Rpusd1	98	56.863	Nannospalax_galili
ENSPMEG00000002910	rpusd1	100	78.947	ENSNBRG00000006457	rpusd1	100	78.947	Neolamprologus_brichardi
ENSPMEG00000002910	rpusd1	53	49.412	ENSNLEG00000008424	-	97	50.000	Nomascus_leucogenys
ENSPMEG00000002910	rpusd1	98	62.416	ENSMEUG00000016049	RPUSD1	98	62.416	Notamacropus_eugenii
ENSPMEG00000002910	rpusd1	98	50.836	ENSOPRG00000008340	RPUSD1	98	50.836	Ochotona_princeps
ENSPMEG00000002910	rpusd1	98	56.522	ENSODEG00000016945	RPUSD1	98	56.522	Octodon_degus
ENSPMEG00000002910	rpusd1	99	79.221	ENSONIG00000015672	rpusd1	100	79.221	Oreochromis_niloticus
ENSPMEG00000002910	rpusd1	100	76.898	ENSORLG00000013009	rpusd1	99	76.898	Oryzias_latipes
ENSPMEG00000002910	rpusd1	100	76.898	ENSORLG00020010382	rpusd1	99	76.898	Oryzias_latipes_hni
ENSPMEG00000002910	rpusd1	100	76.238	ENSORLG00015021354	rpusd1	99	76.238	Oryzias_latipes_hsok
ENSPMEG00000002910	rpusd1	100	77.888	ENSOMEG00000021426	rpusd1	99	77.888	Oryzias_melastigma
ENSPMEG00000002910	rpusd1	98	57.049	ENSOGAG00000003795	RPUSD1	98	57.049	Otolemur_garnettii
ENSPMEG00000002910	rpusd1	98	59.801	ENSOARG00000014254	RPUSD1	98	59.672	Ovis_aries
ENSPMEG00000002910	rpusd1	98	57.049	ENSPPAG00000034797	RPUSD1	98	57.049	Pan_paniscus
ENSPMEG00000002910	rpusd1	98	58.863	ENSPPRG00000012389	RPUSD1	98	58.863	Panthera_pardus
ENSPMEG00000002910	rpusd1	99	58.804	ENSPTIG00000008545	RPUSD1	91	58.804	Panthera_tigris_altaica
ENSPMEG00000002910	rpusd1	98	57.049	ENSPTRG00000007565	RPUSD1	98	57.049	Pan_troglodytes
ENSPMEG00000002910	rpusd1	98	57.190	ENSPANG00000024401	RPUSD1	98	57.516	Papio_anubis
ENSPMEG00000002910	rpusd1	100	69.408	ENSPKIG00000018890	rpusd1	91	69.408	Paramormyrops_kingsleyae
ENSPMEG00000002910	rpusd1	98	64.784	ENSPSIG00000013945	RPUSD1	99	64.784	Pelodiscus_sinensis
ENSPMEG00000002910	rpusd1	100	74.919	ENSPMGG00000014950	rpusd1	99	74.919	Periophthalmus_magnuspinnatus
ENSPMEG00000002910	rpusd1	98	57.191	ENSPEMG00000000497	Rpusd1	98	57.426	Peromyscus_maniculatus_bairdii
ENSPMEG00000002910	rpusd1	99	53.289	ENSPMAG00000001563	rpusd1	99	54.276	Petromyzon_marinus
ENSPMEG00000002910	rpusd1	98	63.423	ENSPCIG00000021216	-	92	63.423	Phascolarctos_cinereus
ENSPMEG00000002910	rpusd1	100	99.340	ENSPFOG00000007946	rpusd1	100	99.340	Poecilia_formosa
ENSPMEG00000002910	rpusd1	100	99.010	ENSPLAG00000011925	rpusd1	100	99.010	Poecilia_latipinna
ENSPMEG00000002910	rpusd1	100	97.039	ENSPREG00000019851	rpusd1	100	97.039	Poecilia_reticulata
ENSPMEG00000002910	rpusd1	98	43.813	ENSPCAG00000002258	RPUSD1	98	43.813	Procavia_capensis
ENSPMEG00000002910	rpusd1	98	55.082	ENSPCOG00000022582	RPUSD1	98	55.410	Propithecus_coquereli
ENSPMEG00000002910	rpusd1	98	53.770	ENSPVAG00000013104	RPUSD1	98	54.098	Pteropus_vampyrus
ENSPMEG00000002910	rpusd1	100	79.421	ENSPNYG00000024076	rpusd1	100	79.421	Pundamilia_nyererei
ENSPMEG00000002910	rpusd1	99	68.000	ENSPNAG00000013806	rpusd1	99	68.000	Pygocentrus_nattereri
ENSPMEG00000002910	rpusd1	98	58.194	ENSRNOG00000023639	Rpusd1	98	59.076	Rattus_norvegicus
ENSPMEG00000002910	rpusd1	98	57.705	ENSRBIG00000030238	RPUSD1	98	57.705	Rhinopithecus_bieti
ENSPMEG00000002910	rpusd1	98	57.705	ENSRROG00000036663	RPUSD1	98	57.705	Rhinopithecus_roxellana
ENSPMEG00000002910	rpusd1	98	58.863	ENSSBOG00000033063	RPUSD1	98	58.863	Saimiri_boliviensis_boliviensis
ENSPMEG00000002910	rpusd1	98	62.416	ENSSHAG00000013500	RPUSD1	98	62.416	Sarcophilus_harrisii
ENSPMEG00000002910	rpusd1	98	72.819	ENSSFOG00015014394	rpusd1	99	72.819	Scleropages_formosus
ENSPMEG00000002910	rpusd1	100	78.135	ENSSMAG00000008045	rpusd1	93	81.877	Scophthalmus_maximus
ENSPMEG00000002910	rpusd1	100	77.670	ENSSDUG00000001829	rpusd1	97	81.877	Seriola_dumerili
ENSPMEG00000002910	rpusd1	100	77.670	ENSSLDG00000020853	rpusd1	97	81.877	Seriola_lalandi_dorsalis
ENSPMEG00000002910	rpusd1	54	72.892	ENSSARG00000011187	-	99	72.892	Sorex_araneus
ENSPMEG00000002910	rpusd1	62	63.298	ENSSPUG00000005119	-	98	63.298	Sphenodon_punctatus
ENSPMEG00000002910	rpusd1	100	84.142	ENSSPAG00000012708	rpusd1	99	84.142	Stegastes_partitus
ENSPMEG00000002910	rpusd1	98	57.705	ENSSSCG00000008000	RPUSD1	98	64.567	Sus_scrofa
ENSPMEG00000002910	rpusd1	82	70.683	ENSTGUG00000015375	RPUSD1	98	70.683	Taeniopygia_guttata
ENSPMEG00000002910	rpusd1	100	74.757	ENSTRUG00000003041	rpusd1	99	77.023	Takifugu_rubripes
ENSPMEG00000002910	rpusd1	99	71.667	ENSTNIG00000002660	rpusd1	99	71.667	Tetraodon_nigroviridis
ENSPMEG00000002910	rpusd1	98	58.689	ENSTTRG00000010167	RPUSD1	98	59.344	Tursiops_truncatus
ENSPMEG00000002910	rpusd1	98	58.194	ENSUAMG00000012736	RPUSD1	98	58.194	Ursus_americanus
ENSPMEG00000002910	rpusd1	98	58.528	ENSUMAG00000021174	RPUSD1	94	62.934	Ursus_maritimus
ENSPMEG00000002910	rpusd1	98	59.197	ENSVVUG00000012357	RPUSD1	98	59.197	Vulpes_vulpes
ENSPMEG00000002910	rpusd1	98	64.430	ENSXETG00000007184	rpusd1	98	64.430	Xenopus_tropicalis
ENSPMEG00000002910	rpusd1	100	94.408	ENSXCOG00000017930	rpusd1	100	94.408	Xiphophorus_couchianus
ENSPMEG00000002910	rpusd1	100	94.408	ENSXMAG00000024084	rpusd1	100	94.408	Xiphophorus_maculatus