EuRBPDB

  • Home
  • Cancer
  • Family
  • Species
  • RBPredictor
  • Search
  • Download
  • Submit
  • Help
  • Contact

  • Description
  • RBDs
  • Transcripts
  • Gene Model
  • PPI
  • Paralogs
  • Orthologs
Description
Ensembl ID
ENSPMEG00000002993 (Gene tree)
Gene ID
106915865
Gene Symbol
-
Alias
-
Full Name
RNA-binding motif%2C single-stranded-interacting protein 3
Gene Type
protein_coding
Species
Poecilia_mexicana
Status
putative
Strand
Minus strand
Length
328320 bases
Position
chrKQ551163.1:146046-474365
Accession
106915865
RBP type
canonical RBP
Summary
-
RNA binding domains(RBDs)
Protein IDDomain Pfam IDE-value Domain number Total number
ENSPMEP00000001999RRM_1PF00076.222.8e-3112
ENSPMEP00000001999RRM_1PF00076.222.8e-3122
ENSPMEP00000002005RRM_1PF00076.222.8e-3112
ENSPMEP00000002005RRM_1PF00076.222.8e-3122
ENSPMEP00000002014RRM_1PF00076.222.8e-3112
ENSPMEP00000002014RRM_1PF00076.222.8e-3122
ENSPMEP00000002007RRM_1PF00076.225.1e-3112
ENSPMEP00000002007RRM_1PF00076.225.1e-3122
ENSPMEP00000002008RRM_1PF00076.225.1e-3112
ENSPMEP00000002008RRM_1PF00076.225.1e-3122
Transcripts
Transcript IDNameLengthRefSeq ID Protein IDLengthRefSeq IDUniportKB ID
ENSPMET00000013245-2206-ENSPMEP00000002008519 (aa)-UPI0004446A9C
ENSPMET00000013266-1819-ENSPMEP00000001999416 (aa)-UPI000443D34C
ENSPMET00000013258-1819XM_014983798ENSPMEP00000002005416 (aa)XP_014839284UPI000443D34C
ENSPMET00000013240-2203-ENSPMEP00000002007519 (aa)-UPI0004446A9C
ENSPMET00000013252-1251-ENSPMEP00000002014416 (aa)-UPI000443D34C
Gene Model
Click here to download ENSPMEG00000002993's gene model file
Protein-Protein Interaction (PPI)

Clik here to download ENSPMEG00000002993's network
Paralogs
Ensembl IDGene SymbolCoverageIdentiy ParalogGene SymbolCoverageIdentiy
ENSPMEG00000002993-6567.340ENSPMEG00000015689rbms2b7371.705
ENSPMEG00000002993-8866.845ENSPMEG00000015838RBMS18966.316
ENSPMEG00000002993-7761.801ENSPMEG00000016185rbms1a8462.092
ENSPMEG00000002993-8874.247ENSPMEG00000020550rbms2a8973.475
Orthologs
Ensembl IDGene SymbolCoverageIdentiy OrthologGene SymbolCoverageIdentiy Species
ENSPMEG00000002993-9988.599ENSG00000144642RBMS310090.530Homo_sapiens
ENSPMEG00000002993-10099.281ENSAPOG00000003432-10099.281Acanthochromis_polyacanthus
ENSPMEG00000002993-9973.742ENSAPOG00000007266rbms39381.865Acanthochromis_polyacanthus
ENSPMEG00000002993-6984.211ENSAMEG00000005947RBMS39984.211Ailuropoda_melanoleuca
ENSPMEG00000002993-7897.239ENSACIG00000006987-8997.239Amphilophus_citrinellus
ENSPMEG00000002993-8874.044ENSACIG00000021113RBMS39574.590Amphilophus_citrinellus
ENSPMEG00000002993-9981.925ENSAOCG00000021274rbms39981.925Amphiprion_ocellaris
ENSPMEG00000002993-9896.341ENSAOCG00000024104-10091.743Amphiprion_ocellaris
ENSPMEG00000002993-8283.569ENSAPEG00000016299rbms38786.787Amphiprion_percula
ENSPMEG00000002993-10090.887ENSAPEG00000009481-10090.887Amphiprion_percula
ENSPMEG00000002993-10099.041ENSATEG00000008433-10099.041Anabas_testudineus
ENSPMEG00000002993-9982.311ENSATEG00000024295rbms39982.783Anabas_testudineus
ENSPMEG00000002993-9986.247ENSAPLG00000012270RBMS39985.548Anas_platyrhynchos
ENSPMEG00000002993-9988.333ENSACAG00000028664RBMS39988.333Anolis_carolinensis
ENSPMEG00000002993-9985.945ENSANAG00000021899RBMS39985.945Aotus_nancymaae
ENSPMEG00000002993-10090.000ENSACLG00000008976-10088.847Astatotilapia_calliptera
ENSPMEG00000002993-9981.560ENSACLG00000018506rbms39982.033Astatotilapia_calliptera
ENSPMEG00000002993-6287.984ENSAMXG00000043770-10087.984Astyanax_mexicanus
ENSPMEG00000002993-9990.120ENSAMXG00000020388rbms39990.120Astyanax_mexicanus
ENSPMEG00000002993-9988.836ENSBTAG00000044062RBMS39988.836Bos_taurus
ENSPMEG00000002993-9985.945ENSCJAG00000004312RBMS39985.945Callithrix_jacchus
ENSPMEG00000002993-9985.355ENSCAFG00000005464RBMS39985.355Canis_familiaris
ENSPMEG00000002993-9985.355ENSCAFG00020024980RBMS39985.355Canis_lupus_dingo
ENSPMEG00000002993-9988.361ENSCHIG00000009144RBMS39988.361Capra_hircus
ENSPMEG00000002993-7685.801ENSTSYG00000002615RBMS39985.801Carlito_syrichta
ENSPMEG00000002993-8883.607ENSCAPG00000017783RBMS39582.888Cavia_aperea
ENSPMEG00000002993-9988.942ENSCPOG00000006457RBMS39988.942Cavia_porcellus
ENSPMEG00000002993-9985.945ENSCCAG00000008671RBMS39985.945Cebus_capucinus
ENSPMEG00000002993-10085.584ENSCATG00000013222RBMS310085.584Cercocebus_atys
ENSPMEG00000002993-9988.124ENSCLAG00000005866RBMS39988.124Chinchilla_lanigera
ENSPMEG00000002993-6587.823ENSCSAG00000009655RBMS39987.823Chlorocebus_sabaeus
ENSPMEG00000002993-8792.000ENSCHOG00000000758RBMS38692.000Choloepus_hoffmanni
ENSPMEG00000002993-9988.571ENSCPBG00000022678RBMS39988.571Chrysemys_picta_bellii
ENSPMEG00000002993-9985.714ENSCANG00000032137RBMS39985.714Colobus_angolensis_palliatus
ENSPMEG00000002993-9986.538ENSCGRG00001007243Rbms39986.538Cricetulus_griseus_chok1gshd
ENSPMEG00000002993-9986.538ENSCGRG00000004599Rbms39986.538Cricetulus_griseus_crigri
ENSPMEG00000002993-10097.122ENSCSEG00000014677-9499.588Cynoglossus_semilaevis
ENSPMEG00000002993-9981.882ENSCSEG00000010011RBMS39982.353Cynoglossus_semilaevis
ENSPMEG00000002993-10099.279ENSCVAG00000022814-10099.738Cyprinodon_variegatus
ENSPMEG00000002993-9983.333ENSCVAG00000022354rbms39983.333Cyprinodon_variegatus
ENSPMEG00000002993-9989.398ENSDARG00000044574rbms39594.891Danio_rerio
ENSPMEG00000002993-9987.886ENSDNOG00000016645RBMS39687.886Dasypus_novemcinctus
ENSPMEG00000002993-9987.648ENSDORG00000007220Rbms39987.648Dipodomys_ordii
ENSPMEG00000002993-8787.500ENSETEG00000009485-8687.500Echinops_telfairi
ENSPMEG00000002993-6754.122ENSEBUG00000005830rbms38655.263Eptatretus_burgeri
ENSPMEG00000002993-9988.361ENSEASG00005006152RBMS39988.361Equus_asinus_asinus
ENSPMEG00000002993-9988.361ENSECAG00000017871RBMS39988.361Equus_caballus
ENSPMEG00000002993-9079.597ENSEEUG00000014337RBMS310079.597Erinaceus_europaeus
ENSPMEG00000002993-9980.615ENSELUG00000002862rbms39980.615Esox_lucius
ENSPMEG00000002993-9296.345ENSELUG00000006905-9897.531Esox_lucius
ENSPMEG00000002993-9988.124ENSFCAG00000002130RBMS39988.124Felis_catus
ENSPMEG00000002993-9988.810ENSFALG00000009165RBMS39988.810Ficedula_albicollis
ENSPMEG00000002993-9987.648ENSFDAG00000008278RBMS39987.648Fukomys_damarensis
ENSPMEG00000002993-9967.943ENSFHEG00000004787RBMS39476.022Fundulus_heteroclitus
ENSPMEG00000002993-9089.196ENSGMOG00000002600-9689.196Gadus_morhua
ENSPMEG00000002993-9988.810ENSGALG00000011439RBMS39988.810Gallus_gallus
ENSPMEG00000002993-9983.135ENSGAFG00000000168rbms39983.135Gambusia_affinis
ENSPMEG00000002993-10099.519ENSGAFG00000003329-10099.519Gambusia_affinis
ENSPMEG00000002993-6588.235ENSGAGG00000004039RBMS39988.235Gopherus_agassizii
ENSPMEG00000002993-9985.945ENSGGOG00000007228RBMS39985.945Gorilla_gorilla
ENSPMEG00000002993-6385.502ENSHBUG00000021196rbms39485.502Haplochromis_burtoni
ENSPMEG00000002993-10098.670ENSHBUG00000019785-9694.240Haplochromis_burtoni
ENSPMEG00000002993-9988.124ENSHGLG00000002170RBMS39988.124Heterocephalus_glaber_female
ENSPMEG00000002993-9988.124ENSHGLG00100014278RBMS39988.124Heterocephalus_glaber_male
ENSPMEG00000002993-10097.362ENSHCOG00000007894-10097.362Hippocampus_comes
ENSPMEG00000002993-9990.120ENSIPUG00000017680rbms39990.120Ictalurus_punctatus
ENSPMEG00000002993-9988.599ENSSTOG00000006324RBMS39988.599Ictidomys_tridecemlineatus
ENSPMEG00000002993-9984.561ENSJJAG00000014708Rbms39984.798Jaculus_jaculus
ENSPMEG00000002993-10098.561ENSKMAG00000012586-10098.561Kryptolebias_marmoratus
ENSPMEG00000002993-9980.841ENSKMAG00000020500rbms39980.841Kryptolebias_marmoratus
ENSPMEG00000002993-10097.842ENSLBEG00000027388-10097.959Labrus_bergylta
ENSPMEG00000002993-6175.094ENSLBEG00000006677rbms39775.094Labrus_bergylta
ENSPMEG00000002993-9990.453ENSLACG00000010581RBMS39990.453Latimeria_chalumnae
ENSPMEG00000002993-6992.069ENSLOCG00000002328rbms39992.069Lepisosteus_oculatus
ENSPMEG00000002993-9985.126ENSLAFG00000000354RBMS39985.126Loxodonta_africana
ENSPMEG00000002993-9988.361ENSMFAG00000033300RBMS39988.361Macaca_fascicularis
ENSPMEG00000002993-9988.361ENSMMUG00000004404RBMS39988.361Macaca_mulatta
ENSPMEG00000002993-9985.714ENSMNEG00000035839RBMS39985.714Macaca_nemestrina
ENSPMEG00000002993-10085.584ENSMLEG00000029464RBMS310085.584Mandrillus_leucophaeus
ENSPMEG00000002993-9982.588ENSMAMG00000024043rbms39983.765Mastacembelus_armatus
ENSPMEG00000002993-9498.728ENSMAMG00000002176-10098.724Mastacembelus_armatus
ENSPMEG00000002993-10095.794ENSMZEG00005026469-9695.794Maylandia_zebra
ENSPMEG00000002993-9981.560ENSMZEG00005006308rbms39982.033Maylandia_zebra
ENSPMEG00000002993-9986.538ENSMAUG00000016436Rbms39986.538Mesocricetus_auratus
ENSPMEG00000002993-9985.945ENSMICG00000049249RBMS39985.945Microcebus_murinus
ENSPMEG00000002993-9986.298ENSMOCG00000006997Rbms39986.298Microtus_ochrogaster
ENSPMEG00000002993-8284.046ENSMMOG00000008471RBMS38987.576Mola_mola
ENSPMEG00000002993-10097.122ENSMMOG00000015071-10097.122Mola_mola
ENSPMEG00000002993-9981.124ENSMODG00000015125RBMS39980.401Monodelphis_domestica
ENSPMEG00000002993-9982.118ENSMALG00000019536RBMS39980.425Monopterus_albus
ENSPMEG00000002993-10098.321ENSMALG00000009155-10098.321Monopterus_albus
ENSPMEG00000002993-9985.577MGP_CAROLIEiJ_G0032783Rbms310090.821Mus_caroli
ENSPMEG00000002993-9986.298ENSMUSG00000039607Rbms310092.271Mus_musculus
ENSPMEG00000002993-9986.091MGP_PahariEiJ_G0015650Rbms310092.271Mus_pahari
ENSPMEG00000002993-9986.298MGP_SPRETEiJ_G0033930Rbms310092.271Mus_spretus
ENSPMEG00000002993-9985.355ENSMPUG00000011956RBMS39985.355Mustela_putorius_furo
ENSPMEG00000002993-9988.361ENSMLUG00000000659RBMS39988.361Myotis_lucifugus
ENSPMEG00000002993-9988.462ENSNGAG00000014039Rbms39988.462Nannospalax_galili
ENSPMEG00000002993-10098.321ENSNBRG00000018065-10098.321Neolamprologus_brichardi
ENSPMEG00000002993-9985.945ENSNLEG00000004129RBMS39985.945Nomascus_leucogenys
ENSPMEG00000002993-9978.995ENSMEUG00000004772RBMS39978.995Notamacropus_eugenii
ENSPMEG00000002993-9985.450ENSOPRG00000006808RBMS38585.450Ochotona_princeps
ENSPMEG00000002993-9988.599ENSODEG00000003651RBMS39988.599Octodon_degus
ENSPMEG00000002993-9976.247ENSONIG00000007172rbms39976.722Oreochromis_niloticus
ENSPMEG00000002993-9985.912ENSOANG00000010529RBMS39985.912Ornithorhynchus_anatinus
ENSPMEG00000002993-9984.668ENSOCUG00000004840RBMS39984.668Oryctolagus_cuniculus
ENSPMEG00000002993-9980.998ENSORLG00000005370RBMS39980.998Oryzias_latipes
ENSPMEG00000002993-10097.602ENSORLG00000002306-10097.602Oryzias_latipes
ENSPMEG00000002993-9980.760ENSORLG00020022674RBMS39980.760Oryzias_latipes_hni
ENSPMEG00000002993-10097.842ENSORLG00020008496-10097.842Oryzias_latipes_hni
ENSPMEG00000002993-10097.842ENSORLG00015015719-10097.842Oryzias_latipes_hsok
ENSPMEG00000002993-9981.235ENSORLG00015005509rbms39981.235Oryzias_latipes_hsok
ENSPMEG00000002993-9795.792ENSOMEG00000007677-10097.650Oryzias_melastigma
ENSPMEG00000002993-9981.710ENSOMEG00000014805RBMS39981.710Oryzias_melastigma
ENSPMEG00000002993-9984.668ENSOARG00000014684RBMS39984.668Ovis_aries
ENSPMEG00000002993-9985.945ENSPPAG00000036519RBMS39985.945Pan_paniscus
ENSPMEG00000002993-9985.253ENSPPRG00000002761RBMS39985.253Panthera_pardus
ENSPMEG00000002993-9987.886ENSPTIG00000011568RBMS39987.886Panthera_tigris_altaica
ENSPMEG00000002993-9988.599ENSPTRG00000014709RBMS39988.599Pan_troglodytes
ENSPMEG00000002993-10085.584ENSPANG00000010234RBMS310085.584Papio_anubis
ENSPMEG00000002993-5092.788ENSPKIG00000016025-7392.788Paramormyrops_kingsleyae
ENSPMEG00000002993-6292.248ENSPKIG00000007989-10092.248Paramormyrops_kingsleyae
ENSPMEG00000002993-9988.095ENSPSIG00000005269RBMS39988.095Pelodiscus_sinensis
ENSPMEG00000002993-9298.691ENSPMGG00000021683-10098.691Periophthalmus_magnuspinnatus
ENSPMEG00000002993-8283.668ENSPMGG00000021544rbms38685.886Periophthalmus_magnuspinnatus
ENSPMEG00000002993-9983.614ENSPEMG00000001117Rbms39983.614Peromyscus_maniculatus_bairdii
ENSPMEG00000002993-8390.313ENSPCIG00000006106RBMS38990.187Phascolarctos_cinereus
ENSPMEG00000002993-9983.373ENSPFOG00000017887rbms39983.373Poecilia_formosa
ENSPMEG00000002993-7781.620ENSPLAG00000016866-8281.620Poecilia_latipinna
ENSPMEG00000002993-10098.266ENSPREG00000018221-9798.266Poecilia_reticulata
ENSPMEG00000002993-10081.517ENSPREG00000011880rbms310081.517Poecilia_reticulata
ENSPMEG00000002993-9972.311ENSPPYG00000014050RBMS38272.311Pongo_abelii
ENSPMEG00000002993-9965.904ENSPCAG00000006307RBMS39965.904Procavia_capensis
ENSPMEG00000002993-9986.175ENSPCOG00000017136RBMS39986.175Propithecus_coquereli
ENSPMEG00000002993-8992.000ENSPVAG00000014037RBMS39976.201Pteropus_vampyrus
ENSPMEG00000002993-9981.324ENSPNYG00000010546rbms39981.797Pundamilia_nyererei
ENSPMEG00000002993-10098.561ENSPNYG00000012624-10098.561Pundamilia_nyererei
ENSPMEG00000002993-9990.120ENSPNAG00000001800rbms39990.120Pygocentrus_nattereri
ENSPMEG00000002993-9986.538ENSRNOG00000025881Rbms39986.538Rattus_norvegicus
ENSPMEG00000002993-9985.484ENSRBIG00000035863RBMS39985.484Rhinopithecus_bieti
ENSPMEG00000002993-8886.842ENSRROG00000027512RBMS39485.788Rhinopithecus_roxellana
ENSPMEG00000002993-9985.945ENSSBOG00000020232RBMS39985.945Saimiri_boliviensis_boliviensis
ENSPMEG00000002993-8883.651ENSSHAG00000002411RBMS39582.574Sarcophilus_harrisii
ENSPMEG00000002993-10094.724ENSSFOG00015008578rbms310094.724Scleropages_formosus
ENSPMEG00000002993-9978.638ENSSMAG00000004997rbms39983.060Scophthalmus_maximus
ENSPMEG00000002993-9793.300ENSSMAG00000020065-9793.300Scophthalmus_maximus
ENSPMEG00000002993-10099.281ENSSDUG00000019287-10099.281Seriola_dumerili
ENSPMEG00000002993-9982.118ENSSDUG00000013656RBMS39982.588Seriola_dumerili
ENSPMEG00000002993-9981.776ENSSLDG00000020276RBMS39982.243Seriola_lalandi_dorsalis
ENSPMEG00000002993-10099.281ENSSLDG00000013224-10099.281Seriola_lalandi_dorsalis
ENSPMEG00000002993-7874.636ENSSARG00000000695RBMS39473.714Sorex_araneus
ENSPMEG00000002993-6987.031ENSSPUG00000017197RBMS39785.906Sphenodon_punctatus
ENSPMEG00000002993-9981.690ENSSPAG00000020693rbms39982.160Stegastes_partitus
ENSPMEG00000002993-10090.826ENSSPAG00000003983-10090.826Stegastes_partitus
ENSPMEG00000002993-9988.124ENSSSCG00000036381RBMS39988.124Sus_scrofa
ENSPMEG00000002993-7686.364ENSTGUG00000003572RBMS39985.758Taeniopygia_guttata
ENSPMEG00000002993-9980.706ENSTRUG00000021719RBMS39980.706Takifugu_rubripes
ENSPMEG00000002993-10086.698ENSTRUG00000007482-10086.874Takifugu_rubripes
ENSPMEG00000002993-7888.047ENSTBEG00000005362RBMS39486.857Tupaia_belangeri
ENSPMEG00000002993-9984.668ENSTTRG00000006202RBMS39984.668Tursiops_truncatus
ENSPMEG00000002993-9985.355ENSUMAG00000000263RBMS39985.355Ursus_maritimus
ENSPMEG00000002993-8876.240ENSVPAG00000003842RBMS39475.385Vicugna_pacos
ENSPMEG00000002993-8886.684ENSVVUG00000004660RBMS39492.202Vulpes_vulpes
ENSPMEG00000002993-7082.237ENSXETG00000032055RBMS39882.237Xenopus_tropicalis
ENSPMEG00000002993-9284.021ENSXCOG00000019600-10084.021Xiphophorus_couchianus
ENSPMEG00000002993-9981.280ENSXMAG00000021783rbms39981.280Xiphophorus_maculatus
ENSPMEG00000002993-10099.760ENSXMAG00000014382-10099.760Xiphophorus_maculatus

Copyright © , Bioinformatics Center, Sun Yat-sen Memorial Hospital, Sun Yat-sen University, China. All Rights Reserved.

Any comment and suggestion, please contact us