EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSPMEG00000003539 (Gene tree)
Gene ID: 106923771
Gene Symbol: mrto4
Alias: -
Full Name: MRT4 homolog%2C ribosome maturation factor
Gene Type: protein_coding
Species: Poecilia_mexicana
Status: putative
Strand: Plus strand
Length: 4671 bases
Position: chrKQ551630.1:287855-292525
Accession: 106923771
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSPMEP00000022543	Ribosomal_L10	PF00466.20	3.2e-20	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSPMET00000012463	-	3252	XM_014997034	ENSPMEP00000022543	237 (aa)	XP_014852520	UPI00072E3D43

Gene Model

Click here to download ENSPMEG00000003539's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSPMEG00000003539's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSPMEG00000003539	mrto4	95	75.893	ENSG00000053372	MRTO4	92	76.712	Homo_sapiens
ENSPMEG00000003539	mrto4	95	90.708	ENSAPOG00000011387	mrto4	92	91.364	Acanthochromis_polyacanthus
ENSPMEG00000003539	mrto4	69	87.730	ENSAPOG00000013189	-	80	88.535	Acanthochromis_polyacanthus
ENSPMEG00000003539	mrto4	69	87.730	ENSAPOG00000013290	-	80	88.535	Acanthochromis_polyacanthus
ENSPMEG00000003539	mrto4	95	75.000	ENSAMEG00000003014	MRTO4	92	75.799	Ailuropoda_melanoleuca
ENSPMEG00000003539	mrto4	92	49.315	ENSAMEG00000014981	-	100	49.315	Ailuropoda_melanoleuca
ENSPMEG00000003539	mrto4	95	87.611	ENSACIG00000008213	mrto4	92	88.636	Amphilophus_citrinellus
ENSPMEG00000003539	mrto4	92	89.401	ENSAOCG00000006483	mrto4	84	90.521	Amphiprion_ocellaris
ENSPMEG00000003539	mrto4	98	89.700	ENSAPEG00000004866	mrto4	94	91.364	Amphiprion_percula
ENSPMEG00000003539	mrto4	95	88.496	ENSATEG00000024976	mrto4	92	89.091	Anabas_testudineus
ENSPMEG00000003539	mrto4	68	73.292	ENSAPLG00000013861	MRTO4	88	75.484	Anas_platyrhynchos
ENSPMEG00000003539	mrto4	95	75.446	ENSANAG00000029674	MRTO4	92	76.256	Aotus_nancymaae
ENSPMEG00000003539	mrto4	95	89.381	ENSACLG00000016523	mrto4	92	90.455	Astatotilapia_calliptera
ENSPMEG00000003539	mrto4	94	84.685	ENSAMXG00000003899	mrto4	92	85.000	Astyanax_mexicanus
ENSPMEG00000003539	mrto4	95	75.893	ENSBTAG00000011951	MRTO4	92	76.712	Bos_taurus
ENSPMEG00000003539	mrto4	100	71.967	ENSCJAG00000006812	MRTO4	92	76.256	Callithrix_jacchus
ENSPMEG00000003539	mrto4	95	66.964	ENSCAFG00000000532	-	91	67.123	Canis_familiaris
ENSPMEG00000003539	mrto4	91	53.241	ENSCAFG00000009080	-	98	53.241	Canis_familiaris
ENSPMEG00000003539	mrto4	95	74.554	ENSCAFG00000015189	-	91	74.886	Canis_familiaris
ENSPMEG00000003539	mrto4	95	74.554	ENSCAFG00020008173	MRTO4	91	74.886	Canis_lupus_dingo
ENSPMEG00000003539	mrto4	89	56.132	ENSCHIG00000010639	-	91	56.132	Capra_hircus
ENSPMEG00000003539	mrto4	95	75.893	ENSCHIG00000014751	MRTO4	92	76.712	Capra_hircus
ENSPMEG00000003539	mrto4	95	74.107	ENSTSYG00000013413	MRTO4	92	74.886	Carlito_syrichta
ENSPMEG00000003539	mrto4	84	71.859	ENSCAPG00000012648	MRTO4	85	73.196	Cavia_aperea
ENSPMEG00000003539	mrto4	95	74.554	ENSCPOG00000033237	MRTO4	91	75.799	Cavia_porcellus
ENSPMEG00000003539	mrto4	95	75.446	ENSCCAG00000036206	MRTO4	92	76.256	Cebus_capucinus
ENSPMEG00000003539	mrto4	98	65.948	ENSCATG00000030492	-	89	70.673	Cercocebus_atys
ENSPMEG00000003539	mrto4	95	73.661	ENSCLAG00000001997	MRTO4	91	74.886	Chinchilla_lanigera
ENSPMEG00000003539	mrto4	92	76.147	ENSCSAG00000000876	-	91	76.147	Chlorocebus_sabaeus
ENSPMEG00000003539	mrto4	95	73.214	ENSCSAG00000018596	-	92	73.973	Chlorocebus_sabaeus
ENSPMEG00000003539	mrto4	92	79.909	ENSCPBG00000023562	MRTO4	90	79.909	Chrysemys_picta_bellii
ENSPMEG00000003539	mrto4	95	60.000	ENSCSAVG00000011770	-	78	61.009	Ciona_savignyi
ENSPMEG00000003539	mrto4	95	68.750	ENSCANG00000005353	-	91	69.406	Colobus_angolensis_palliatus
ENSPMEG00000003539	mrto4	95	75.000	ENSCANG00000002395	-	92	75.799	Colobus_angolensis_palliatus
ENSPMEG00000003539	mrto4	98	67.094	ENSCGRG00001001286	-	90	72.038	Cricetulus_griseus_chok1gshd
ENSPMEG00000003539	mrto4	92	76.606	ENSCGRG00001005758	-	91	76.606	Cricetulus_griseus_chok1gshd
ENSPMEG00000003539	mrto4	98	67.094	ENSCGRG00000001527	-	90	72.038	Cricetulus_griseus_crigri
ENSPMEG00000003539	mrto4	92	74.312	ENSCGRG00000010649	-	91	74.312	Cricetulus_griseus_crigri
ENSPMEG00000003539	mrto4	93	90.000	ENSCSEG00000021629	mrto4	92	90.000	Cynoglossus_semilaevis
ENSPMEG00000003539	mrto4	92	97.260	ENSCVAG00000012249	mrto4	93	97.260	Cyprinodon_variegatus
ENSPMEG00000003539	mrto4	97	81.659	ENSDARG00000007130	mrto4	90	84.018	Danio_rerio
ENSPMEG00000003539	mrto4	88	75.000	ENSDNOG00000030871	-	87	75.000	Dasypus_novemcinctus
ENSPMEG00000003539	mrto4	95	75.893	ENSDNOG00000010119	-	92	76.712	Dasypus_novemcinctus
ENSPMEG00000003539	mrto4	96	55.508	ENSDNOG00000045395	-	89	58.140	Dasypus_novemcinctus
ENSPMEG00000003539	mrto4	92	75.229	ENSDORG00000025382	Mrto4	91	75.229	Dipodomys_ordii
ENSPMEG00000003539	mrto4	99	70.954	ENSETEG00000001675	MRTO4	91	75.342	Echinops_telfairi
ENSPMEG00000003539	mrto4	95	75.000	ENSEASG00005014967	MRTO4	92	75.342	Equus_asinus_asinus
ENSPMEG00000003539	mrto4	95	75.000	ENSECAG00000012598	MRTO4	92	75.342	Equus_caballus
ENSPMEG00000003539	mrto4	90	57.944	ENSEEUG00000013520	MRTO4	92	58.571	Erinaceus_europaeus
ENSPMEG00000003539	mrto4	100	79.747	ENSELUG00000011152	mrto4	92	83.562	Esox_lucius
ENSPMEG00000003539	mrto4	100	72.996	ENSFCAG00000008771	MRTO4	92	76.256	Felis_catus
ENSPMEG00000003539	mrto4	92	73.973	ENSFALG00000010619	MRTO4	92	73.973	Ficedula_albicollis
ENSPMEG00000003539	mrto4	95	74.107	ENSFDAG00000013300	MRTO4	91	75.342	Fukomys_damarensis
ENSPMEG00000003539	mrto4	92	96.789	ENSFHEG00000022920	mrto4	94	96.364	Fundulus_heteroclitus
ENSPMEG00000003539	mrto4	90	85.446	ENSGMOG00000001422	mrto4	95	84.932	Gadus_morhua
ENSPMEG00000003539	mrto4	93	74.545	ENSGALG00000003991	MRTO4	93	74.545	Gallus_gallus
ENSPMEG00000003539	mrto4	100	97.046	ENSGAFG00000012570	mrto4	100	97.046	Gambusia_affinis
ENSPMEG00000003539	mrto4	95	88.496	ENSGACG00000001672	mrto4	93	89.545	Gasterosteus_aculeatus
ENSPMEG00000003539	mrto4	89	77.830	ENSGAGG00000012997	MRTO4	88	78.095	Gopherus_agassizii
ENSPMEG00000003539	mrto4	88	63.942	ENSGGOG00000042625	-	88	63.942	Gorilla_gorilla
ENSPMEG00000003539	mrto4	98	72.500	ENSGGOG00000000533	MRTO4	92	76.712	Gorilla_gorilla
ENSPMEG00000003539	mrto4	90	52.336	ENSGGOG00000036991	-	83	52.632	Gorilla_gorilla
ENSPMEG00000003539	mrto4	95	88.938	ENSHBUG00000009670	mrto4	92	90.000	Haplochromis_burtoni
ENSPMEG00000003539	mrto4	95	74.107	ENSHGLG00000012157	MRTO4	92	75.342	Heterocephalus_glaber_female
ENSPMEG00000003539	mrto4	95	74.107	ENSHGLG00100014484	MRTO4	92	75.342	Heterocephalus_glaber_male
ENSPMEG00000003539	mrto4	100	81.857	ENSHCOG00000019894	mrto4	93	85.455	Hippocampus_comes
ENSPMEG00000003539	mrto4	96	85.590	ENSIPUG00000002957	mrto4	91	87.671	Ictalurus_punctatus
ENSPMEG00000003539	mrto4	95	74.554	ENSSTOG00000028112	MRTO4	92	75.342	Ictidomys_tridecemlineatus
ENSPMEG00000003539	mrto4	92	73.516	ENSJJAG00000017998	Mrto4	91	73.516	Jaculus_jaculus
ENSPMEG00000003539	mrto4	95	91.150	ENSKMAG00000010148	mrto4	93	92.727	Kryptolebias_marmoratus
ENSPMEG00000003539	mrto4	93	90.909	ENSLBEG00000025010	mrto4	94	90.909	Labrus_bergylta
ENSPMEG00000003539	mrto4	92	79.909	ENSLACG00000019155	MRTO4	92	79.909	Latimeria_chalumnae
ENSPMEG00000003539	mrto4	91	84.259	ENSLOCG00000004468	mrto4	88	84.259	Lepisosteus_oculatus
ENSPMEG00000003539	mrto4	95	75.893	ENSLAFG00000010416	MRTO4	92	76.712	Loxodonta_africana
ENSPMEG00000003539	mrto4	95	75.000	ENSMFAG00000033225	-	92	75.799	Macaca_fascicularis
ENSPMEG00000003539	mrto4	95	75.000	ENSMMUG00000038335	MRTO4	92	75.799	Macaca_mulatta
ENSPMEG00000003539	mrto4	95	57.143	ENSMMUG00000044851	-	90	57.534	Macaca_mulatta
ENSPMEG00000003539	mrto4	95	75.000	ENSMNEG00000032783	-	92	75.799	Macaca_nemestrina
ENSPMEG00000003539	mrto4	95	75.000	ENSMLEG00000023273	-	92	75.799	Mandrillus_leucophaeus
ENSPMEG00000003539	mrto4	95	88.938	ENSMAMG00000014839	mrto4	92	90.455	Mastacembelus_armatus
ENSPMEG00000003539	mrto4	95	89.381	ENSMZEG00005013929	mrto4	92	90.455	Maylandia_zebra
ENSPMEG00000003539	mrto4	92	76.256	ENSMGAG00000005361	MRTO4	92	76.256	Meleagris_gallopavo
ENSPMEG00000003539	mrto4	92	76.147	ENSMAUG00000019627	-	91	76.147	Mesocricetus_auratus
ENSPMEG00000003539	mrto4	95	74.107	ENSMICG00000004019	MRTO4	91	74.886	Microcebus_murinus
ENSPMEG00000003539	mrto4	86	66.341	ENSMICG00000033640	-	100	66.341	Microcebus_murinus
ENSPMEG00000003539	mrto4	73	73.563	ENSMOCG00000018413	Mrto4	89	74.269	Microtus_ochrogaster
ENSPMEG00000003539	mrto4	96	88.158	ENSMMOG00000010735	mrto4	90	90.995	Mola_mola
ENSPMEG00000003539	mrto4	92	77.626	ENSMODG00000015874	MRTO4	90	77.626	Monodelphis_domestica
ENSPMEG00000003539	mrto4	93	90.455	ENSMALG00000007769	mrto4	98	90.411	Monopterus_albus
ENSPMEG00000003539	mrto4	92	76.147	MGP_CAROLIEiJ_G0026711	Mrto4	91	76.147	Mus_caroli
ENSPMEG00000003539	mrto4	92	76.147	ENSMUSG00000028741	Mrto4	100	80.328	Mus_musculus
ENSPMEG00000003539	mrto4	92	75.688	MGP_PahariEiJ_G0029042	Mrto4	91	75.688	Mus_pahari
ENSPMEG00000003539	mrto4	92	76.147	MGP_SPRETEiJ_G0027691	Mrto4	91	76.147	Mus_spretus
ENSPMEG00000003539	mrto4	95	74.107	ENSMPUG00000016181	MRTO4	92	74.886	Mustela_putorius_furo
ENSPMEG00000003539	mrto4	95	76.339	ENSMLUG00000001566	-	92	77.169	Myotis_lucifugus
ENSPMEG00000003539	mrto4	95	74.554	ENSMLUG00000025001	-	92	75.342	Myotis_lucifugus
ENSPMEG00000003539	mrto4	99	71.967	ENSNGAG00000011660	Mrto4	91	75.688	Nannospalax_galili
ENSPMEG00000003539	mrto4	95	88.938	ENSNBRG00000021435	mrto4	92	90.455	Neolamprologus_brichardi
ENSPMEG00000003539	mrto4	68	70.988	ENSNLEG00000034965	-	84	72.436	Nomascus_leucogenys
ENSPMEG00000003539	mrto4	98	68.067	ENSNLEG00000018006	-	92	70.776	Nomascus_leucogenys
ENSPMEG00000003539	mrto4	95	67.411	ENSNLEG00000027896	-	91	68.037	Nomascus_leucogenys
ENSPMEG00000003539	mrto4	69	78.659	ENSMEUG00000000027	MRTO4	100	78.659	Notamacropus_eugenii
ENSPMEG00000003539	mrto4	92	77.169	ENSOPRG00000012746	MRTO4	92	77.169	Ochotona_princeps
ENSPMEG00000003539	mrto4	95	68.304	ENSODEG00000014387	-	91	69.406	Octodon_degus
ENSPMEG00000003539	mrto4	95	73.214	ENSODEG00000019157	-	91	74.429	Octodon_degus
ENSPMEG00000003539	mrto4	95	74.107	ENSODEG00000015379	-	91	75.342	Octodon_degus
ENSPMEG00000003539	mrto4	95	69.196	ENSODEG00000011537	-	91	70.320	Octodon_degus
ENSPMEG00000003539	mrto4	95	62.500	ENSODEG00000014016	-	80	63.470	Octodon_degus
ENSPMEG00000003539	mrto4	95	89.823	ENSONIG00000014318	mrto4	92	90.909	Oreochromis_niloticus
ENSPMEG00000003539	mrto4	96	69.869	ENSOANG00000015345	MRTO4	88	73.333	Ornithorhynchus_anatinus
ENSPMEG00000003539	mrto4	99	71.548	ENSOCUG00000000274	MRTO4	92	75.342	Oryctolagus_cuniculus
ENSPMEG00000003539	mrto4	93	92.273	ENSORLG00000027922	mrto4	92	92.273	Oryzias_latipes
ENSPMEG00000003539	mrto4	93	92.273	ENSORLG00020019412	mrto4	92	92.273	Oryzias_latipes_hni
ENSPMEG00000003539	mrto4	93	92.273	ENSORLG00015015309	mrto4	92	92.273	Oryzias_latipes_hsok
ENSPMEG00000003539	mrto4	93	92.727	ENSOMEG00000021110	mrto4	93	92.727	Oryzias_melastigma
ENSPMEG00000003539	mrto4	95	75.000	ENSOGAG00000010713	-	92	75.799	Otolemur_garnettii
ENSPMEG00000003539	mrto4	99	51.046	ENSOGAG00000027996	-	90	53.881	Otolemur_garnettii
ENSPMEG00000003539	mrto4	95	76.339	ENSPPAG00000043731	MRTO4	92	77.169	Pan_paniscus
ENSPMEG00000003539	mrto4	95	52.679	ENSPPAG00000039572	-	90	52.968	Pan_paniscus
ENSPMEG00000003539	mrto4	100	71.730	ENSPPRG00000024765	MRTO4	92	74.886	Panthera_pardus
ENSPMEG00000003539	mrto4	100	72.996	ENSPTIG00000016208	MRTO4	92	76.256	Panthera_tigris_altaica
ENSPMEG00000003539	mrto4	95	75.893	ENSPTRG00000000262	MRTO4	92	76.712	Pan_troglodytes
ENSPMEG00000003539	mrto4	95	53.125	ENSPTRG00000046027	-	90	53.425	Pan_troglodytes
ENSPMEG00000003539	mrto4	95	66.071	ENSPANG00000017838	-	91	66.667	Papio_anubis
ENSPMEG00000003539	mrto4	92	69.863	ENSPANG00000011596	-	96	69.863	Papio_anubis
ENSPMEG00000003539	mrto4	90	86.854	ENSPKIG00000017917	mrto4	90	86.574	Paramormyrops_kingsleyae
ENSPMEG00000003539	mrto4	73	77.907	ENSPSIG00000015125	MRTO4	89	77.907	Pelodiscus_sinensis
ENSPMEG00000003539	mrto4	93	81.818	ENSPMGG00000013461	mrto4	91	81.818	Periophthalmus_magnuspinnatus
ENSPMEG00000003539	mrto4	92	76.147	ENSPEMG00000010459	-	91	76.147	Peromyscus_maniculatus_bairdii
ENSPMEG00000003539	mrto4	92	70.588	ENSPEMG00000023720	-	91	70.588	Peromyscus_maniculatus_bairdii
ENSPMEG00000003539	mrto4	99	71.193	ENSPCIG00000003652	MRTO4	90	76.712	Phascolarctos_cinereus
ENSPMEG00000003539	mrto4	100	99.160	ENSPFOG00000013266	mrto4	100	99.160	Poecilia_formosa
ENSPMEG00000003539	mrto4	100	99.160	ENSPLAG00000016285	mrto4	100	99.160	Poecilia_latipinna
ENSPMEG00000003539	mrto4	100	97.468	ENSPREG00000006249	mrto4	100	97.468	Poecilia_reticulata
ENSPMEG00000003539	mrto4	95	75.893	ENSPPYG00000001795	MRTO4	92	76.712	Pongo_abelii
ENSPMEG00000003539	mrto4	92	69.863	ENSPCAG00000001458	MRTO4	92	69.863	Procavia_capensis
ENSPMEG00000003539	mrto4	99	70.711	ENSPCOG00000014182	MRTO4	92	74.429	Propithecus_coquereli
ENSPMEG00000003539	mrto4	95	74.107	ENSPVAG00000005775	MRTO4	91	74.886	Pteropus_vampyrus
ENSPMEG00000003539	mrto4	95	88.938	ENSPNYG00000018672	mrto4	92	90.000	Pundamilia_nyererei
ENSPMEG00000003539	mrto4	96	83.333	ENSPNAG00000027733	mrto4	92	84.545	Pygocentrus_nattereri
ENSPMEG00000003539	mrto4	72	73.684	ENSRNOG00000017979	Mrto4	89	73.684	Rattus_norvegicus
ENSPMEG00000003539	mrto4	95	62.054	ENSRBIG00000013434	-	91	62.557	Rhinopithecus_bieti
ENSPMEG00000003539	mrto4	83	68.878	ENSRBIG00000036159	-	90	69.634	Rhinopithecus_bieti
ENSPMEG00000003539	mrto4	95	74.554	ENSRBIG00000036806	-	92	75.342	Rhinopithecus_bieti
ENSPMEG00000003539	mrto4	95	70.982	ENSRROG00000037374	-	91	71.689	Rhinopithecus_roxellana
ENSPMEG00000003539	mrto4	95	74.554	ENSRROG00000042838	-	92	75.342	Rhinopithecus_roxellana
ENSPMEG00000003539	mrto4	95	74.107	ENSRROG00000011593	-	88	74.886	Rhinopithecus_roxellana
ENSPMEG00000003539	mrto4	98	73.077	ENSSBOG00000022924	MRTO4	92	75.799	Saimiri_boliviensis_boliviensis
ENSPMEG00000003539	mrto4	89	75.714	ENSSHAG00000008423	MRTO4	90	75.714	Sarcophilus_harrisii
ENSPMEG00000003539	mrto4	94	84.753	ENSSFOG00015006887	mrto4	92	85.780	Scleropages_formosus
ENSPMEG00000003539	mrto4	95	89.381	ENSSMAG00000014393	mrto4	92	90.455	Scophthalmus_maximus
ENSPMEG00000003539	mrto4	95	90.265	ENSSDUG00000015362	mrto4	92	91.364	Seriola_dumerili
ENSPMEG00000003539	mrto4	95	90.265	ENSSLDG00000015813	mrto4	92	91.364	Seriola_lalandi_dorsalis
ENSPMEG00000003539	mrto4	99	72.199	ENSSARG00000012700	MRTO4	91	75.799	Sorex_araneus
ENSPMEG00000003539	mrto4	99	78.723	ENSSPUG00000001110	MRTO4	93	81.735	Sphenodon_punctatus
ENSPMEG00000003539	mrto4	100	88.608	ENSSPAG00000007811	mrto4	92	91.818	Stegastes_partitus
ENSPMEG00000003539	mrto4	95	74.554	ENSSSCG00000034814	MRTO4	91	75.342	Sus_scrofa
ENSPMEG00000003539	mrto4	77	74.176	ENSTGUG00000016935	MRTO4	98	74.586	Taeniopygia_guttata
ENSPMEG00000003539	mrto4	95	87.168	ENSTRUG00000019838	mrto4	92	88.182	Takifugu_rubripes
ENSPMEG00000003539	mrto4	95	88.938	ENSTNIG00000014802	mrto4	92	89.545	Tetraodon_nigroviridis
ENSPMEG00000003539	mrto4	95	74.554	ENSTTRG00000014203	MRTO4	92	75.342	Tursiops_truncatus
ENSPMEG00000003539	mrto4	91	73.953	ENSUAMG00000026191	MRTO4	84	74.762	Ursus_americanus
ENSPMEG00000003539	mrto4	100	72.152	ENSUMAG00000018964	MRTO4	92	75.799	Ursus_maritimus
ENSPMEG00000003539	mrto4	95	74.554	ENSVVUG00000029432	MRTO4	91	74.886	Vulpes_vulpes
ENSPMEG00000003539	mrto4	92	74.429	ENSXETG00000020828	mrto4	91	74.429	Xenopus_tropicalis
ENSPMEG00000003539	mrto4	98	98.283	ENSXCOG00000013521	mrto4	100	98.283	Xiphophorus_couchianus