EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSPMEG00000003547 (Gene tree)
Gene ID: 106906819
Gene Symbol: alyref
Alias: -
Full Name: Aly/REF export factor
Gene Type: protein_coding
Species: Poecilia_mexicana
Status: putative
Strand: Plus strand
Length: 3419 bases
Position: chrKQ551060.1:353070-356488
Accession: 106906819
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSPMEP00000002480	RRM_1	PF00076.22	1.4e-13	1	1
ENSPMEP00000022545	RRM_1	PF00076.22	1.4e-13	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSPMET00000012461	-	840	-	ENSPMEP00000022545	279 (aa)	-	-
ENSPMET00000012448	-	816	XM_014972258	ENSPMEP00000002480	271 (aa)	XP_014827744	UPI0004445019

Gene Model

Click here to download ENSPMEG00000003547's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSPMEG00000003547's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSPMEG00000003547	alyref	100	48.175	ENSPMEG00000023039	-	100	45.818

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSPMEG00000003547	alyref	100	53.430	ENSAPOG00000000183	-	100	52.347	Acanthochromis_polyacanthus
ENSPMEG00000003547	alyref	100	48.000	ENSACIG00000020351	-	100	51.203	Amphilophus_citrinellus
ENSPMEG00000003547	alyref	99	76.277	ENSACIG00000006351	alyref	98	76.449	Amphilophus_citrinellus
ENSPMEG00000003547	alyref	100	79.061	ENSAOCG00000014012	alyref	99	81.752	Amphiprion_ocellaris
ENSPMEG00000003547	alyref	100	53.818	ENSAOCG00000019305	-	100	52.364	Amphiprion_ocellaris
ENSPMEG00000003547	alyref	100	54.545	ENSAPEG00000013527	-	100	52.000	Amphiprion_percula
ENSPMEG00000003547	alyref	100	79.061	ENSAPEG00000014603	alyref	99	81.752	Amphiprion_percula
ENSPMEG00000003547	alyref	100	57.971	ENSATEG00000000382	-	100	58.333	Anabas_testudineus
ENSPMEG00000003547	alyref	100	76.157	ENSATEG00000004307	alyref	100	79.004	Anabas_testudineus
ENSPMEG00000003547	alyref	100	53.873	ENSACLG00000010184	-	100	54.196	Astatotilapia_calliptera
ENSPMEG00000003547	alyref	100	80.935	ENSACLG00000008432	alyref	100	81.295	Astatotilapia_calliptera
ENSPMEG00000003547	alyref	100	72.143	ENSAMXG00000007359	alyref	100	74.286	Astyanax_mexicanus
ENSPMEG00000003547	alyref	99	45.161	ENSCING00000013568	-	99	43.972	Ciona_intestinalis
ENSPMEG00000003547	alyref	99	45.725	ENSCSAVG00000003324	-	99	42.279	Ciona_savignyi
ENSPMEG00000003547	alyref	100	77.338	ENSCSEG00000017800	alyref	100	79.496	Cynoglossus_semilaevis
ENSPMEG00000003547	alyref	100	49.270	ENSCVAG00000007789	-	100	45.126	Cyprinodon_variegatus
ENSPMEG00000003547	alyref	100	81.022	ENSCVAG00000014869	alyref	100	84.307	Cyprinodon_variegatus
ENSPMEG00000003547	alyref	100	77.857	ENSDARG00000077732	alyref	100	77.857	Danio_rerio
ENSPMEG00000003547	alyref	97	43.617	FBgn0010774	Ref1	65	49.444	Drosophila_melanogaster
ENSPMEG00000003547	alyref	70	46.907	ENSEBUG00000006305	alyref	100	39.502	Eptatretus_burgeri
ENSPMEG00000003547	alyref	99	51.493	ENSEBUG00000008253	alyref	95	51.282	Eptatretus_burgeri
ENSPMEG00000003547	alyref	100	64.437	ENSELUG00000008849	-	100	65.493	Esox_lucius
ENSPMEG00000003547	alyref	100	72.993	ENSELUG00000017178	alyref	100	70.182	Esox_lucius
ENSPMEG00000003547	alyref	57	75.949	ENSFALG00000011923	-	96	74.026	Ficedula_albicollis
ENSPMEG00000003547	alyref	100	49.270	ENSFHEG00000004698	-	100	47.273	Fundulus_heteroclitus
ENSPMEG00000003547	alyref	100	81.919	ENSFHEG00000019426	alyref	100	81.685	Fundulus_heteroclitus
ENSPMEG00000003547	alyref	67	56.716	ENSGMOG00000013122	-	100	58.763	Gadus_morhua
ENSPMEG00000003547	alyref	100	70.182	ENSGMOG00000009882	alyref	100	66.909	Gadus_morhua
ENSPMEG00000003547	alyref	100	98.155	ENSGAFG00000006014	alyref	100	98.155	Gambusia_affinis
ENSPMEG00000003547	alyref	100	46.403	ENSGAFG00000007573	-	100	46.377	Gambusia_affinis
ENSPMEG00000003547	alyref	100	54.355	ENSHBUG00000001454	-	100	54.514	Haplochromis_burtoni
ENSPMEG00000003547	alyref	100	80.935	ENSHBUG00000020196	alyref	100	81.295	Haplochromis_burtoni
ENSPMEG00000003547	alyref	98	49.270	ENSHCOG00000012825	-	95	47.464	Hippocampus_comes
ENSPMEG00000003547	alyref	100	72.924	ENSIPUG00000009469	alyref	100	71.119	Ictalurus_punctatus
ENSPMEG00000003547	alyref	72	65.482	ENSSTOG00000016570	-	92	62.567	Ictidomys_tridecemlineatus
ENSPMEG00000003547	alyref	100	53.455	ENSKMAG00000006462	-	100	51.273	Kryptolebias_marmoratus
ENSPMEG00000003547	alyref	100	77.978	ENSKMAG00000008912	alyref	100	79.061	Kryptolebias_marmoratus
ENSPMEG00000003547	alyref	100	48.123	ENSLBEG00000005387	-	100	47.797	Labrus_bergylta
ENSPMEG00000003547	alyref	99	47.653	ENSLBEG00000012930	-	99	49.286	Labrus_bergylta
ENSPMEG00000003547	alyref	100	82.545	ENSLBEG00000023118	alyref	92	83.630	Labrus_bergylta
ENSPMEG00000003547	alyref	76	68.519	ENSLOCG00000013879	alyref	89	67.442	Lepisosteus_oculatus
ENSPMEG00000003547	alyref	100	79.496	ENSMAMG00000003034	alyref	100	80.216	Mastacembelus_armatus
ENSPMEG00000003547	alyref	100	50.347	ENSMAMG00000005464	-	100	49.648	Mastacembelus_armatus
ENSPMEG00000003547	alyref	100	80.935	ENSMZEG00005008639	alyref	100	81.295	Maylandia_zebra
ENSPMEG00000003547	alyref	100	53.521	ENSMZEG00005012096	-	100	53.846	Maylandia_zebra
ENSPMEG00000003547	alyref	99	49.270	ENSMMOG00000007032	-	98	44.912	Mola_mola
ENSPMEG00000003547	alyref	99	79.856	ENSMMOG00000012458	alyref	99	77.698	Mola_mola
ENSPMEG00000003547	alyref	100	50.676	ENSMALG00000006054	-	100	48.797	Monopterus_albus
ENSPMEG00000003547	alyref	98	56.727	ENSMLUG00000030671	-	99	54.380	Myotis_lucifugus
ENSPMEG00000003547	alyref	100	55.124	ENSMLUG00000006521	-	100	53.214	Myotis_lucifugus
ENSPMEG00000003547	alyref	98	53.047	ENSMLUG00000009247	-	78	56.279	Myotis_lucifugus
ENSPMEG00000003547	alyref	98	55.357	ENSMLUG00000022467	-	99	49.117	Myotis_lucifugus
ENSPMEG00000003547	alyref	98	54.513	ENSMLUG00000028605	-	99	53.737	Myotis_lucifugus
ENSPMEG00000003547	alyref	100	56.475	ENSMLUG00000014372	-	100	54.286	Myotis_lucifugus
ENSPMEG00000003547	alyref	98	55.926	ENSMLUG00000022178	-	99	54.015	Myotis_lucifugus
ENSPMEG00000003547	alyref	100	55.000	ENSMLUG00000004098	-	100	53.214	Myotis_lucifugus
ENSPMEG00000003547	alyref	100	66.544	ENSNGAG00000022014	-	100	62.132	Nannospalax_galili
ENSPMEG00000003547	alyref	100	54.610	ENSNBRG00000017460	-	100	54.930	Neolamprologus_brichardi
ENSPMEG00000003547	alyref	100	81.295	ENSNBRG00000001747	alyref	100	81.655	Neolamprologus_brichardi
ENSPMEG00000003547	alyref	100	78.292	ENSONIG00000019434	alyref	100	80.071	Oreochromis_niloticus
ENSPMEG00000003547	alyref	100	55.714	ENSONIG00000003296	-	100	58.007	Oreochromis_niloticus
ENSPMEG00000003547	alyref	99	41.066	ENSORLG00000001620	-	60	46.256	Oryzias_latipes
ENSPMEG00000003547	alyref	100	48.014	ENSORLG00020015673	-	99	47.122	Oryzias_latipes_hni
ENSPMEG00000003547	alyref	100	84.615	ENSORLG00020011942	alyref	100	84.249	Oryzias_latipes_hni
ENSPMEG00000003547	alyref	100	83.516	ENSORLG00015022664	alyref	100	83.150	Oryzias_latipes_hsok
ENSPMEG00000003547	alyref	100	48.214	ENSORLG00015015143	-	99	45.051	Oryzias_latipes_hsok
ENSPMEG00000003547	alyref	100	82.721	ENSOMEG00000019176	alyref	100	83.824	Oryzias_melastigma
ENSPMEG00000003547	alyref	99	51.111	ENSOMEG00000007158	-	97	48.708	Oryzias_melastigma
ENSPMEG00000003547	alyref	68	72.432	ENSPPAG00000036403	-	68	71.351	Pan_paniscus
ENSPMEG00000003547	alyref	99	72.263	ENSPKIG00000006233	-	81	68.364	Paramormyrops_kingsleyae
ENSPMEG00000003547	alyref	100	72.364	ENSPKIG00000007070	alyref	100	69.818	Paramormyrops_kingsleyae
ENSPMEG00000003547	alyref	99	76.103	ENSPMGG00000016600	alyref	93	77.061	Periophthalmus_magnuspinnatus
ENSPMEG00000003547	alyref	74	48.000	ENSPMGG00000012994	-	70	58.065	Periophthalmus_magnuspinnatus
ENSPMEG00000003547	alyref	100	61.871	ENSPEMG00000016628	-	77	75.401	Peromyscus_maniculatus_bairdii
ENSPMEG00000003547	alyref	100	100.000	ENSPFOG00000022825	alyref	99	100.000	Poecilia_formosa
ENSPMEG00000003547	alyref	100	48.175	ENSPFOG00000017094	-	100	45.818	Poecilia_formosa
ENSPMEG00000003547	alyref	100	48.175	ENSPLAG00000014380	-	100	45.818	Poecilia_latipinna
ENSPMEG00000003547	alyref	100	99.631	ENSPLAG00000006948	alyref	100	99.631	Poecilia_latipinna
ENSPMEG00000003547	alyref	100	98.524	ENSPREG00000015795	alyref	100	98.524	Poecilia_reticulata
ENSPMEG00000003547	alyref	100	49.265	ENSPREG00000003649	-	100	47.253	Poecilia_reticulata
ENSPMEG00000003547	alyref	100	80.935	ENSPNYG00000017498	alyref	100	81.295	Pundamilia_nyererei
ENSPMEG00000003547	alyref	99	49.650	ENSPNYG00000002879	-	98	52.313	Pundamilia_nyererei
ENSPMEG00000003547	alyref	100	74.820	ENSPNAG00000002531	alyref	100	72.662	Pygocentrus_nattereri
ENSPMEG00000003547	alyref	71	70.769	ENSSBOG00000030924	-	87	69.588	Saimiri_boliviensis_boliviensis
ENSPMEG00000003547	alyref	99	55.072	ENSSHAG00000000609	-	99	52.963	Sarcophilus_harrisii
ENSPMEG00000003547	alyref	99	53.818	ENSSHAG00000012866	-	78	58.252	Sarcophilus_harrisii
ENSPMEG00000003547	alyref	68	73.404	ENSSFOG00015003678	alyref	83	72.973	Scleropages_formosus
ENSPMEG00000003547	alyref	76	76.442	ENSSFOG00015003923	alyref	73	75.120	Scleropages_formosus
ENSPMEG00000003547	alyref	100	52.982	ENSSMAG00000011169	-	100	54.902	Scophthalmus_maximus
ENSPMEG00000003547	alyref	100	80.072	ENSSMAG00000009283	alyref	100	79.348	Scophthalmus_maximus
ENSPMEG00000003547	alyref	100	79.061	ENSSDUG00000016158	alyref	99	81.387	Seriola_dumerili
ENSPMEG00000003547	alyref	100	78.058	ENSSLDG00000017803	alyref	100	78.417	Seriola_lalandi_dorsalis
ENSPMEG00000003547	alyref	99	54.909	ENSSPAG00000017028	-	99	53.004	Stegastes_partitus
ENSPMEG00000003547	alyref	100	51.042	ENSTRUG00000003051	-	100	49.826	Takifugu_rubripes
ENSPMEG00000003547	alyref	100	72.760	ENSTNIG00000011595	alyref	100	71.326	Tetraodon_nigroviridis
ENSPMEG00000003547	alyref	100	50.000	ENSTNIG00000014136	-	100	47.445	Tetraodon_nigroviridis
ENSPMEG00000003547	alyref	69	73.016	ENSVVUG00000000272	-	82	71.809	Vulpes_vulpes
ENSPMEG00000003547	alyref	100	95.941	ENSXCOG00000018047	alyref	99	96.703	Xiphophorus_couchianus
ENSPMEG00000003547	alyref	100	96.310	ENSXMAG00000012218	alyref	99	97.070	Xiphophorus_maculatus
ENSPMEG00000003547	alyref	100	49.635	ENSXMAG00000018086	-	100	46.909	Xiphophorus_maculatus