EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSPMEG00000003627 (Gene tree)
Gene ID: 106906886
Gene Symbol: -
Alias: -
Full Name: replication protein A 70 kDa DNA-binding subunit-like
Gene Type: protein_coding
Species: Poecilia_mexicana
Status: putative
Strand: Minus strand
Length: 31114 bases
Position: chrKQ553421.1:2339-33452
Accession: 106906886
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSPMEP00000022609	tRNA_anti-codon	PF01336.25	1.9e-12	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSPMET00000012305	-	2028	XM_014972352	ENSPMEP00000022609	638 (aa)	XP_014827838	-

Gene Model

Click here to download ENSPMEG00000003627's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSPMEG00000003627's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSPMEG00000003627	-	96	58.117	ENSPMEG00000020602	rpa1	86	69.059

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSPMEG00000003627	-	97	74.164	ENSAPOG00000019409	RPA1	95	74.012	Acanthochromis_polyacanthus
ENSPMEG00000003627	-	96	58.738	ENSAPOG00000011658	rpa1	87	70.617	Acanthochromis_polyacanthus
ENSPMEG00000003627	-	93	55.316	ENSAMEG00000007706	RPA1	91	54.333	Ailuropoda_melanoleuca
ENSPMEG00000003627	-	83	56.660	ENSACIG00000007277	rpa1	87	57.358	Amphilophus_citrinellus
ENSPMEG00000003627	-	92	74.536	ENSACIG00000012881	RPA1	94	74.536	Amphilophus_citrinellus
ENSPMEG00000003627	-	96	59.024	ENSAOCG00000023376	rpa1	94	58.995	Amphiprion_ocellaris
ENSPMEG00000003627	-	97	77.476	ENSAOCG00000009003	RPA1	95	77.476	Amphiprion_ocellaris
ENSPMEG00000003627	-	96	58.576	ENSAPEG00000008634	rpa1	94	58.319	Amphiprion_percula
ENSPMEG00000003627	-	97	78.288	ENSAPEG00000019132	RPA1	95	78.288	Amphiprion_percula
ENSPMEG00000003627	-	78	70.098	ENSATEG00000022024	rpa1	88	70.098	Anabas_testudineus
ENSPMEG00000003627	-	97	75.559	ENSATEG00000006443	RPA1	95	75.080	Anabas_testudineus
ENSPMEG00000003627	-	95	55.914	ENSAPLG00000012442	RPA1	95	42.920	Anas_platyrhynchos
ENSPMEG00000003627	-	97	49.280	ENSACAG00000014490	RPA1	94	50.720	Anolis_carolinensis
ENSPMEG00000003627	-	93	55.259	ENSANAG00000023456	RPA1	93	55.760	Aotus_nancymaae
ENSPMEG00000003627	-	91	60.104	ENSACLG00000006640	rpa1	94	58.549	Astatotilapia_calliptera
ENSPMEG00000003627	-	97	75.884	ENSACLG00000005223	RPA1	95	75.884	Astatotilapia_calliptera
ENSPMEG00000003627	-	97	59.061	ENSAMXG00000008418	rpa1	91	70.316	Astyanax_mexicanus
ENSPMEG00000003627	-	97	53.945	ENSBTAG00000009711	RPA1	94	54.180	Bos_taurus
ENSPMEG00000003627	-	97	53.784	ENSCJAG00000001848	RPA1	94	53.933	Callithrix_jacchus
ENSPMEG00000003627	-	97	54.414	ENSCAFG00000019249	RPA1	94	54.240	Canis_familiaris
ENSPMEG00000003627	-	97	54.414	ENSCAFG00020009847	RPA1	94	54.240	Canis_lupus_dingo
ENSPMEG00000003627	-	97	54.589	ENSCHIG00000026308	RPA1	94	54.487	Capra_hircus
ENSPMEG00000003627	-	97	53.462	ENSTSYG00000003482	-	94	53.945	Carlito_syrichta
ENSPMEG00000003627	-	97	53.623	ENSCPOG00000000035	RPA1	94	53.451	Cavia_porcellus
ENSPMEG00000003627	-	97	45.353	ENSCCAG00000010981	RPA1	94	45.295	Cebus_capucinus
ENSPMEG00000003627	-	97	55.056	ENSCLAG00000005185	-	95	54.473	Chinchilla_lanigera
ENSPMEG00000003627	-	97	51.447	ENSCLAG00000015045	-	94	50.880	Chinchilla_lanigera
ENSPMEG00000003627	-	97	45.032	ENSCSAG00000013833	RPA1	94	44.800	Chlorocebus_sabaeus
ENSPMEG00000003627	-	63	65.594	ENSCHOG00000009454	-	92	65.594	Choloepus_hoffmanni
ENSPMEG00000003627	-	92	55.051	ENSCHOG00000013540	-	94	54.132	Choloepus_hoffmanni
ENSPMEG00000003627	-	97	54.647	ENSCPBG00000020377	RPA1	94	54.861	Chrysemys_picta_bellii
ENSPMEG00000003627	-	96	40.939	ENSCING00000023482	-	93	40.419	Ciona_intestinalis
ENSPMEG00000003627	-	93	54.424	ENSCANG00000030911	RPA1	92	54.424	Colobus_angolensis_palliatus
ENSPMEG00000003627	-	97	54.911	ENSCGRG00001008197	Rpa1	95	53.920	Cricetulus_griseus_chok1gshd
ENSPMEG00000003627	-	63	64.778	ENSCGRG00000000582	Rpa1	92	58.686	Cricetulus_griseus_crigri
ENSPMEG00000003627	-	97	64.506	ENSCSEG00000012726	RPA1	94	63.857	Cynoglossus_semilaevis
ENSPMEG00000003627	-	96	57.886	ENSCSEG00000013066	rpa1	94	57.236	Cynoglossus_semilaevis
ENSPMEG00000003627	-	96	57.861	ENSCVAG00000019431	rpa1	89	68.990	Cyprinodon_variegatus
ENSPMEG00000003627	-	98	81.960	ENSCVAG00000013446	-	96	81.960	Cyprinodon_variegatus
ENSPMEG00000003627	-	97	58.738	ENSDARG00000003938	rpa1	94	59.223	Danio_rerio
ENSPMEG00000003627	-	95	54.723	ENSDNOG00000017218	RPA1	93	53.997	Dasypus_novemcinctus
ENSPMEG00000003627	-	97	54.896	ENSDORG00000006199	Rpa1	94	54.647	Dipodomys_ordii
ENSPMEG00000003627	-	83	45.363	FBgn0010173	RpA-70	86	45.614	Drosophila_melanogaster
ENSPMEG00000003627	-	81	61.538	ENSETEG00000017608	RPA1	77	61.538	Echinops_telfairi
ENSPMEG00000003627	-	93	55.075	ENSEASG00005009372	RPA1	89	64.619	Equus_asinus_asinus
ENSPMEG00000003627	-	97	54.823	ENSECAG00000023886	RPA1	94	54.267	Equus_caballus
ENSPMEG00000003627	-	60	65.026	ENSEEUG00000002186	-	63	65.026	Erinaceus_europaeus
ENSPMEG00000003627	-	97	59.128	ENSELUG00000021071	rpa1	94	59.128	Esox_lucius
ENSPMEG00000003627	-	61	71.649	ENSELUG00000006136	RPA1	77	71.649	Esox_lucius
ENSPMEG00000003627	-	97	55.538	ENSFCAG00000006306	RPA1	94	54.080	Felis_catus
ENSPMEG00000003627	-	97	52.875	ENSFALG00000006575	RPA1	94	52.875	Ficedula_albicollis
ENSPMEG00000003627	-	97	55.072	ENSFDAG00000007720	RPA1	95	54.808	Fukomys_damarensis
ENSPMEG00000003627	-	96	57.818	ENSFHEG00000003580	rpa1	94	57.818	Fundulus_heteroclitus
ENSPMEG00000003627	-	82	68.889	ENSGMOG00000010382	rpa1	91	68.627	Gadus_morhua
ENSPMEG00000003627	-	97	53.140	ENSGALG00000003072	RPA1	94	53.140	Gallus_gallus
ENSPMEG00000003627	-	97	94.373	ENSGAFG00000020953	RPA1	95	94.373	Gambusia_affinis
ENSPMEG00000003627	-	96	58.632	ENSGAFG00000012916	rpa1	86	69.554	Gambusia_affinis
ENSPMEG00000003627	-	96	56.452	ENSGACG00000010856	rpa1	94	56.058	Gasterosteus_aculeatus
ENSPMEG00000003627	-	97	54.647	ENSGAGG00000013611	RPA1	94	54.032	Gopherus_agassizii
ENSPMEG00000003627	-	87	64.792	ENSGGOG00000014186	RPA1	94	53.784	Gorilla_gorilla
ENSPMEG00000003627	-	96	58.833	ENSHBUG00000017773	rpa1	94	58.537	Haplochromis_burtoni
ENSPMEG00000003627	-	92	61.008	ENSHBUG00000009348	RPA1	93	61.008	Haplochromis_burtoni
ENSPMEG00000003627	-	97	54.750	ENSHGLG00000008846	RPA1	95	53.736	Heterocephalus_glaber_female
ENSPMEG00000003627	-	97	50.242	ENSHGLG00100000799	-	94	50.403	Heterocephalus_glaber_male
ENSPMEG00000003627	-	96	48.124	ENSHGLG00100002005	-	96	48.124	Heterocephalus_glaber_male
ENSPMEG00000003627	-	97	54.750	ENSHGLG00100017755	-	95	53.736	Heterocephalus_glaber_male
ENSPMEG00000003627	-	97	46.720	ENSHCOG00000000351	RPA1	92	54.126	Hippocampus_comes
ENSPMEG00000003627	-	96	54.808	ENSHCOG00000001401	rpa1	94	56.006	Hippocampus_comes
ENSPMEG00000003627	-	97	59.098	ENSIPUG00000004400	rpa1	94	59.547	Ictalurus_punctatus
ENSPMEG00000003627	-	89	54.167	ENSSTOG00000022475	RPA1	89	54.167	Ictidomys_tridecemlineatus
ENSPMEG00000003627	-	93	55.966	ENSJJAG00000000876	Rpa1	93	55.611	Jaculus_jaculus
ENSPMEG00000003627	-	97	72.903	ENSKMAG00000000234	RPA1	95	72.742	Kryptolebias_marmoratus
ENSPMEG00000003627	-	98	56.280	ENSKMAG00000005605	rpa1	96	57.325	Kryptolebias_marmoratus
ENSPMEG00000003627	-	96	57.792	ENSLBEG00000021604	rpa1	94	58.117	Labrus_bergylta
ENSPMEG00000003627	-	97	68.694	ENSLBEG00000002281	RPA1	95	68.398	Labrus_bergylta
ENSPMEG00000003627	-	70	56.264	ENSLACG00000007210	RPA1	92	56.264	Latimeria_chalumnae
ENSPMEG00000003627	-	97	57.997	ENSLOCG00000006397	rpa1	94	57.997	Lepisosteus_oculatus
ENSPMEG00000003627	-	97	52.492	ENSLAFG00000015354	RPA1	95	52.492	Loxodonta_africana
ENSPMEG00000003627	-	83	54.494	ENSMFAG00000036138	-	98	54.206	Macaca_fascicularis
ENSPMEG00000003627	-	96	54.235	ENSMMUG00000011604	-	94	53.984	Macaca_mulatta
ENSPMEG00000003627	-	97	50.161	ENSMMUG00000002442	-	94	50.080	Macaca_mulatta
ENSPMEG00000003627	-	75	60.584	ENSMNEG00000029837	-	89	60.584	Macaca_nemestrina
ENSPMEG00000003627	-	93	54.958	ENSMNEG00000031632	-	93	54.698	Macaca_nemestrina
ENSPMEG00000003627	-	93	52.421	ENSMLEG00000038768	-	93	52.421	Mandrillus_leucophaeus
ENSPMEG00000003627	-	96	57.374	ENSMAMG00000017993	rpa1	90	69.136	Mastacembelus_armatus
ENSPMEG00000003627	-	97	75.625	ENSMAMG00000020097	RPA1	95	75.625	Mastacembelus_armatus
ENSPMEG00000003627	-	96	58.833	ENSMZEG00005007551	rpa1	94	58.692	Maylandia_zebra
ENSPMEG00000003627	-	97	75.884	ENSMZEG00005024731	RPA1	95	75.884	Maylandia_zebra
ENSPMEG00000003627	-	96	53.583	ENSMGAG00000005315	RPA1	93	52.932	Meleagris_gallopavo
ENSPMEG00000003627	-	93	55.593	ENSMAUG00000010474	Rpa1	93	55.408	Mesocricetus_auratus
ENSPMEG00000003627	-	97	54.341	ENSMICG00000012867	RPA1	94	54.341	Microcebus_murinus
ENSPMEG00000003627	-	97	53.859	ENSMOCG00000013019	Rpa1	95	53.291	Microtus_ochrogaster
ENSPMEG00000003627	-	85	79.208	ENSMMOG00000010868	RPA1	92	79.208	Mola_mola
ENSPMEG00000003627	-	96	57.630	ENSMMOG00000014292	rpa1	94	59.129	Mola_mola
ENSPMEG00000003627	-	97	54.313	ENSMODG00000010549	RPA1	94	54.823	Monodelphis_domestica
ENSPMEG00000003627	-	96	58.738	ENSMALG00000011453	rpa1	95	59.167	Monopterus_albus
ENSPMEG00000003627	-	97	68.029	ENSMALG00000001208	RPA1	95	67.656	Monopterus_albus
ENSPMEG00000003627	-	97	54.267	MGP_CAROLIEiJ_G0016734	Rpa1	95	54.267	Mus_caroli
ENSPMEG00000003627	-	97	53.994	ENSMUSG00000000751	Rpa1	95	53.291	Mus_musculus
ENSPMEG00000003627	-	97	54.575	MGP_PahariEiJ_G0017871	Rpa1	95	54.267	Mus_pahari
ENSPMEG00000003627	-	97	53.907	MGP_SPRETEiJ_G0017577	Rpa1	95	53.451	Mus_spretus
ENSPMEG00000003627	-	97	54.575	ENSMPUG00000013119	RPA1	94	53.945	Mustela_putorius_furo
ENSPMEG00000003627	-	97	53.907	ENSMLUG00000006113	RPA1	95	53.035	Myotis_lucifugus
ENSPMEG00000003627	-	94	55.025	ENSNGAG00000004522	Rpa1	91	54.201	Nannospalax_galili
ENSPMEG00000003627	-	89	71.705	ENSNBRG00000009672	RPA1	86	72.183	Neolamprologus_brichardi
ENSPMEG00000003627	-	91	59.622	ENSNBRG00000020595	rpa1	93	58.076	Neolamprologus_brichardi
ENSPMEG00000003627	-	97	54.911	ENSNLEG00000017149	RPA1	94	55.072	Nomascus_leucogenys
ENSPMEG00000003627	-	93	47.833	ENSMEUG00000006714	RPA1	92	47.833	Notamacropus_eugenii
ENSPMEG00000003627	-	93	55.705	ENSODEG00000009038	RPA1	91	55.705	Octodon_degus
ENSPMEG00000003627	-	96	58.013	ENSONIG00000013135	rpa1	94	58.347	Oreochromis_niloticus
ENSPMEG00000003627	-	95	54.680	ENSOANG00000010880	RPA1	94	54.590	Ornithorhynchus_anatinus
ENSPMEG00000003627	-	97	52.100	ENSOCUG00000001504	RPA1	95	52.100	Oryctolagus_cuniculus
ENSPMEG00000003627	-	96	58.738	ENSORLG00000004856	rpa1	94	58.862	Oryzias_latipes
ENSPMEG00000003627	-	97	74.121	ENSORLG00000003368	RPA1	95	73.323	Oryzias_latipes
ENSPMEG00000003627	-	97	72.884	ENSORLG00020015284	RPA1	95	72.100	Oryzias_latipes_hni
ENSPMEG00000003627	-	96	58.738	ENSORLG00020008980	rpa1	94	58.862	Oryzias_latipes_hni
ENSPMEG00000003627	-	96	58.738	ENSORLG00015013982	rpa1	94	58.862	Oryzias_latipes_hsok
ENSPMEG00000003627	-	68	81.136	ENSORLG00015005867	-	100	81.136	Oryzias_latipes_hsok
ENSPMEG00000003627	-	97	73.955	ENSORLG00015020383	RPA1	95	73.151	Oryzias_latipes_hsok
ENSPMEG00000003627	-	97	57.166	ENSOMEG00000004704	rpa1	95	56.958	Oryzias_melastigma
ENSPMEG00000003627	-	97	72.142	ENSOMEG00000011040	RPA1	97	72.990	Oryzias_melastigma
ENSPMEG00000003627	-	73	67.808	ENSOGAG00000029379	-	91	67.808	Otolemur_garnettii
ENSPMEG00000003627	-	97	54.911	ENSOGAG00000005581	-	94	54.662	Otolemur_garnettii
ENSPMEG00000003627	-	97	54.428	ENSOARG00000014479	RPA1	94	54.327	Ovis_aries
ENSPMEG00000003627	-	97	55.233	ENSPPAG00000039680	RPA1	94	55.395	Pan_paniscus
ENSPMEG00000003627	-	97	55.538	ENSPPRG00000011807	RPA1	94	54.080	Panthera_pardus
ENSPMEG00000003627	-	97	55.217	ENSPTIG00000007898	RPA1	94	53.760	Panthera_tigris_altaica
ENSPMEG00000003627	-	97	55.233	ENSPTRG00000008539	RPA1	94	55.395	Pan_troglodytes
ENSPMEG00000003627	-	97	54.267	ENSPANG00000024592	RPA1	94	54.019	Papio_anubis
ENSPMEG00000003627	-	98	57.460	ENSPKIG00000008053	rpa1	96	57.937	Paramormyrops_kingsleyae
ENSPMEG00000003627	-	95	54.010	ENSPSIG00000015617	RPA1	94	54.276	Pelodiscus_sinensis
ENSPMEG00000003627	-	96	56.585	ENSPMGG00000011589	rpa1	94	56.585	Periophthalmus_magnuspinnatus
ENSPMEG00000003627	-	97	63.116	ENSPMGG00000000543	RPA1	94	66.840	Periophthalmus_magnuspinnatus
ENSPMEG00000003627	-	97	54.662	ENSPEMG00000021061	Rpa1	95	54.093	Peromyscus_maniculatus_bairdii
ENSPMEG00000003627	-	97	54.589	ENSPCIG00000019049	RPA1	94	54.341	Phascolarctos_cinereus
ENSPMEG00000003627	-	96	58.117	ENSPFOG00000003987	rpa1	94	58.117	Poecilia_formosa
ENSPMEG00000003627	-	96	58.279	ENSPLAG00000004984	rpa1	94	58.279	Poecilia_latipinna
ENSPMEG00000003627	-	99	97.331	ENSPLAG00000008844	-	100	97.331	Poecilia_latipinna
ENSPMEG00000003627	-	97	92.368	ENSPREG00000010119	RPA1	99	92.212	Poecilia_reticulata
ENSPMEG00000003627	-	97	52.404	ENSPREG00000010174	rpa1	97	52.077	Poecilia_reticulata
ENSPMEG00000003627	-	97	54.106	ENSPCOG00000001799	RPA1	94	54.106	Propithecus_coquereli
ENSPMEG00000003627	-	97	54.414	ENSPVAG00000002149	RPA1	94	53.205	Pteropus_vampyrus
ENSPMEG00000003627	-	97	76.045	ENSPNYG00000024165	RPA1	95	76.045	Pundamilia_nyererei
ENSPMEG00000003627	-	96	58.995	ENSPNYG00000016316	rpa1	94	58.699	Pundamilia_nyererei
ENSPMEG00000003627	-	97	50.645	ENSPNAG00000008599	rpa1	94	51.043	Pygocentrus_nattereri
ENSPMEG00000003627	-	93	61.364	ENSRNOG00000003123	Rpa1	95	54.560	Rattus_norvegicus
ENSPMEG00000003627	-	97	54.502	ENSRBIG00000036587	RPA1	94	53.994	Rhinopithecus_bieti
ENSPMEG00000003627	-	97	51.286	ENSRROG00000043278	RPA1	94	51.286	Rhinopithecus_roxellana
ENSPMEG00000003627	-	65	36.215	YAR007C	RFA1	69	36.215	Saccharomyces_cerevisiae
ENSPMEG00000003627	-	88	55.477	ENSSBOG00000030233	RPA1	91	55.360	Saimiri_boliviensis_boliviensis
ENSPMEG00000003627	-	93	56.260	ENSSHAG00000007969	RPA1	90	56.500	Sarcophilus_harrisii
ENSPMEG00000003627	-	97	60.514	ENSSFOG00015005362	rpa1	91	60.645	Scleropages_formosus
ENSPMEG00000003627	-	97	74.168	ENSSMAG00000019746	RPA1	95	74.326	Scophthalmus_maximus
ENSPMEG00000003627	-	96	59.223	ENSSDUG00000011949	rpa1	94	58.937	Seriola_dumerili
ENSPMEG00000003627	-	97	75.889	ENSSDUG00000016358	RPA1	95	76.198	Seriola_dumerili
ENSPMEG00000003627	-	96	58.900	ENSSLDG00000011806	rpa1	94	58.454	Seriola_lalandi_dorsalis
ENSPMEG00000003627	-	97	75.000	ENSSLDG00000020784	RPA1	95	75.153	Seriola_lalandi_dorsalis
ENSPMEG00000003627	-	83	50.654	ENSSARG00000007506	RPA1	82	50.280	Sorex_araneus
ENSPMEG00000003627	-	93	53.923	ENSSPUG00000007223	RPA1	93	52.755	Sphenodon_punctatus
ENSPMEG00000003627	-	95	71.429	ENSSPAG00000011165	RPA1	93	71.429	Stegastes_partitus
ENSPMEG00000003627	-	96	58.537	ENSSPAG00000009903	rpa1	94	58.537	Stegastes_partitus
ENSPMEG00000003627	-	88	63.942	ENSSSCG00000017822	RPA1	92	63.942	Sus_scrofa
ENSPMEG00000003627	-	97	53.387	ENSTGUG00000005775	RPA1	94	52.724	Taeniopygia_guttata
ENSPMEG00000003627	-	97	65.497	ENSTRUG00000000405	RPA1	95	65.300	Takifugu_rubripes
ENSPMEG00000003627	-	96	58.795	ENSTRUG00000003616	rpa1	94	58.632	Takifugu_rubripes
ENSPMEG00000003627	-	96	58.509	ENSTNIG00000016199	rpa1	94	58.442	Tetraodon_nigroviridis
ENSPMEG00000003627	-	63	65.111	ENSTBEG00000002709	RPA1	68	65.111	Tupaia_belangeri
ENSPMEG00000003627	-	97	53.623	ENSTTRG00000001169	RPA1	94	53.686	Tursiops_truncatus
ENSPMEG00000003627	-	89	65.385	ENSUAMG00000015676	RPA1	95	65.385	Ursus_americanus
ENSPMEG00000003627	-	87	64.059	ENSUMAG00000009328	RPA1	90	64.059	Ursus_maritimus
ENSPMEG00000003627	-	96	53.181	ENSVPAG00000009443	RPA1	93	52.529	Vicugna_pacos
ENSPMEG00000003627	-	97	54.414	ENSVVUG00000021715	RPA1	94	54.240	Vulpes_vulpes
ENSPMEG00000003627	-	96	54.766	ENSXETG00000013538	rpa1	93	55.825	Xenopus_tropicalis
ENSPMEG00000003627	-	92	82.003	ENSXCOG00000009899	-	94	80.985	Xiphophorus_couchianus
ENSPMEG00000003627	-	96	57.938	ENSXCOG00000010068	rpa1	95	57.536	Xiphophorus_couchianus
ENSPMEG00000003627	-	96	57.955	ENSXMAG00000004102	rpa1	94	58.435	Xiphophorus_maculatus
ENSPMEG00000003627	-	97	87.856	ENSXMAG00000010333	RPA1	95	87.406	Xiphophorus_maculatus