EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSPMEG00000003663 (Gene tree)
Gene ID: 106929025
Gene Symbol: rnpc3
Alias: -
Full Name: RNA binding region (RNP1%2C RRM) containing 3
Gene Type: protein_coding
Species: Poecilia_mexicana
Status: putative
Strand: Minus strand
Length: 19329 bases
Position: chrKQ552062.1:51994-71322
Accession: 106929025
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSPMEP00000002603	RRM_1	PF00076.22	8.8e-16	1	2
ENSPMEP00000002603	RRM_1	PF00076.22	8.8e-16	2	2
ENSPMEP00000002600	RRM_1	PF00076.22	9.6e-16	1	2
ENSPMEP00000002600	RRM_1	PF00076.22	9.6e-16	2	2

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSPMET00000012250	-	1911	-	ENSPMEP00000002600	520 (aa)	-	-
ENSPMET00000012244	-	1671	XM_015005683	ENSPMEP00000002603	507 (aa)	XP_014861169	UPI00072D983E

Gene Model

Click here to download ENSPMEG00000003663's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSPMEG00000003663's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSPMEG00000003663	rnpc3	97	53.119	ENSG00000185946	RNPC3	96	55.639	Homo_sapiens
ENSPMEG00000003663	rnpc3	99	80.990	ENSAPOG00000017371	rnpc3	99	80.792	Acanthochromis_polyacanthus
ENSPMEG00000003663	rnpc3	97	53.414	ENSAMEG00000001694	RNPC3	95	53.187	Ailuropoda_melanoleuca
ENSPMEG00000003663	rnpc3	99	76.621	ENSACIG00000021043	rnpc3	99	76.817	Amphilophus_citrinellus
ENSPMEG00000003663	rnpc3	99	81.102	ENSAOCG00000014052	rnpc3	100	79.846	Amphiprion_ocellaris
ENSPMEG00000003663	rnpc3	99	80.906	ENSAPEG00000008739	rnpc3	100	79.655	Amphiprion_percula
ENSPMEG00000003663	rnpc3	99	77.778	ENSATEG00000021263	rnpc3	99	77.519	Anabas_testudineus
ENSPMEG00000003663	rnpc3	89	55.702	ENSAPLG00000015605	RNPC3	99	54.825	Anas_platyrhynchos
ENSPMEG00000003663	rnpc3	95	54.397	ENSACAG00000002029	RNPC3	96	52.200	Anolis_carolinensis
ENSPMEG00000003663	rnpc3	97	52.811	ENSANAG00000019950	RNPC3	96	52.976	Aotus_nancymaae
ENSPMEG00000003663	rnpc3	99	79.684	ENSACLG00000014702	rnpc3	99	79.724	Astatotilapia_calliptera
ENSPMEG00000003663	rnpc3	100	63.158	ENSAMXG00000033372	rnpc3	100	63.158	Astyanax_mexicanus
ENSPMEG00000003663	rnpc3	99	53.057	ENSBTAG00000019091	RNPC3	98	52.621	Bos_taurus
ENSPMEG00000003663	rnpc3	97	52.410	ENSCJAG00000035686	RNPC3	95	52.716	Callithrix_jacchus
ENSPMEG00000003663	rnpc3	97	53.521	ENSCAFG00000019972	RNPC3	96	53.293	Canis_familiaris
ENSPMEG00000003663	rnpc3	97	53.521	ENSCAFG00020011300	RNPC3	96	53.293	Canis_lupus_dingo
ENSPMEG00000003663	rnpc3	97	53.877	ENSCHIG00000020361	RNPC3	95	53.614	Capra_hircus
ENSPMEG00000003663	rnpc3	97	52.811	ENSTSYG00000030256	RNPC3	96	52.883	Carlito_syrichta
ENSPMEG00000003663	rnpc3	86	43.891	ENSCAPG00000013600	RNPC3	97	44.091	Cavia_aperea
ENSPMEG00000003663	rnpc3	97	52.209	ENSCPOG00000031638	RNPC3	95	52.515	Cavia_porcellus
ENSPMEG00000003663	rnpc3	97	52.610	ENSCCAG00000024301	RNPC3	96	52.778	Cebus_capucinus
ENSPMEG00000003663	rnpc3	97	53.012	ENSCATG00000002086	RNPC3	96	53.175	Cercocebus_atys
ENSPMEG00000003663	rnpc3	97	41.046	ENSCATG00000035930	-	52	48.163	Cercocebus_atys
ENSPMEG00000003663	rnpc3	97	51.167	ENSCLAG00000005169	RNPC3	98	50.677	Chinchilla_lanigera
ENSPMEG00000003663	rnpc3	97	53.012	ENSCSAG00000001519	RNPC3	96	53.175	Chlorocebus_sabaeus
ENSPMEG00000003663	rnpc3	96	55.976	ENSCPBG00000028311	RNPC3	95	55.777	Chrysemys_picta_bellii
ENSPMEG00000003663	rnpc3	94	36.495	ENSCSAVG00000002800	-	76	54.264	Ciona_savignyi
ENSPMEG00000003663	rnpc3	97	52.610	ENSCANG00000031444	RNPC3	96	52.778	Colobus_angolensis_palliatus
ENSPMEG00000003663	rnpc3	96	54.032	ENSCGRG00001019276	Rnpc3	95	54.032	Cricetulus_griseus_chok1gshd
ENSPMEG00000003663	rnpc3	89	51.965	ENSCGRG00000000053	Rnpc3	99	51.965	Cricetulus_griseus_crigri
ENSPMEG00000003663	rnpc3	99	73.214	ENSCSEG00000013475	rnpc3	99	73.214	Cynoglossus_semilaevis
ENSPMEG00000003663	rnpc3	99	86.051	ENSCVAG00000002645	rnpc3	99	86.051	Cyprinodon_variegatus
ENSPMEG00000003663	rnpc3	99	63.065	ENSDARG00000011247	rnpc3	94	69.886	Danio_rerio
ENSPMEG00000003663	rnpc3	99	52.663	ENSDNOG00000047498	-	97	52.663	Dasypus_novemcinctus
ENSPMEG00000003663	rnpc3	99	52.071	ENSDNOG00000044555	-	97	52.071	Dasypus_novemcinctus
ENSPMEG00000003663	rnpc3	97	52.485	ENSDORG00000027343	Rnpc3	96	52.485	Dipodomys_ordii
ENSPMEG00000003663	rnpc3	97	50.584	ENSEBUG00000002068	rnpc3	96	50.197	Eptatretus_burgeri
ENSPMEG00000003663	rnpc3	97	53.892	ENSEASG00005015957	RNPC3	96	53.082	Equus_asinus_asinus
ENSPMEG00000003663	rnpc3	97	54.092	ENSECAG00000021148	RNPC3	96	53.280	Equus_caballus
ENSPMEG00000003663	rnpc3	99	67.614	ENSELUG00000002264	rnpc3	99	65.076	Esox_lucius
ENSPMEG00000003663	rnpc3	97	53.600	ENSFCAG00000024312	RNPC3	96	53.600	Felis_catus
ENSPMEG00000003663	rnpc3	89	55.482	ENSFALG00000002580	RNPC3	99	53.953	Ficedula_albicollis
ENSPMEG00000003663	rnpc3	98	52.663	ENSFDAG00000019948	RNPC3	97	52.860	Fukomys_damarensis
ENSPMEG00000003663	rnpc3	99	79.523	ENSFHEG00000020647	rnpc3	99	79.324	Fundulus_heteroclitus
ENSPMEG00000003663	rnpc3	98	68.327	ENSGMOG00000019213	rnpc3	99	66.992	Gadus_morhua
ENSPMEG00000003663	rnpc3	96	56.073	ENSGALG00000005162	RNPC3	88	55.263	Gallus_gallus
ENSPMEG00000003663	rnpc3	100	94.303	ENSGAFG00000017236	rnpc3	100	94.303	Gambusia_affinis
ENSPMEG00000003663	rnpc3	99	77.030	ENSGACG00000002048	rnpc3	100	77.176	Gasterosteus_aculeatus
ENSPMEG00000003663	rnpc3	96	56.375	ENSGAGG00000008438	RNPC3	94	56.000	Gopherus_agassizii
ENSPMEG00000003663	rnpc3	97	47.571	ENSGGOG00000026201	-	95	47.166	Gorilla_gorilla
ENSPMEG00000003663	rnpc3	82	77.083	ENSHBUG00000015966	rnpc3	85	77.688	Haplochromis_burtoni
ENSPMEG00000003663	rnpc3	97	52.811	ENSHGLG00000001708	RNPC3	95	53.000	Heterocephalus_glaber_female
ENSPMEG00000003663	rnpc3	97	52.811	ENSHGLG00100003005	RNPC3	95	53.000	Heterocephalus_glaber_male
ENSPMEG00000003663	rnpc3	99	74.851	ENSHCOG00000017135	rnpc3	99	74.901	Hippocampus_comes
ENSPMEG00000003663	rnpc3	98	61.840	ENSIPUG00000002916	rnpc3	99	62.549	Ictalurus_punctatus
ENSPMEG00000003663	rnpc3	97	52.104	ENSSTOG00000025020	RNPC3	95	52.495	Ictidomys_tridecemlineatus
ENSPMEG00000003663	rnpc3	96	52.515	ENSJJAG00000010203	Rnpc3	96	52.485	Jaculus_jaculus
ENSPMEG00000003663	rnpc3	99	80.915	ENSKMAG00000017358	rnpc3	99	80.517	Kryptolebias_marmoratus
ENSPMEG00000003663	rnpc3	100	78.978	ENSLBEG00000024901	rnpc3	99	78.682	Labrus_bergylta
ENSPMEG00000003663	rnpc3	99	57.087	ENSLACG00000005720	RNPC3	92	54.599	Latimeria_chalumnae
ENSPMEG00000003663	rnpc3	99	61.538	ENSLOCG00000007986	rnpc3	99	58.627	Lepisosteus_oculatus
ENSPMEG00000003663	rnpc3	97	53.521	ENSLAFG00000032342	RNPC3	98	51.938	Loxodonta_africana
ENSPMEG00000003663	rnpc3	97	40.404	ENSMFAG00000002917	-	54	47.368	Macaca_fascicularis
ENSPMEG00000003663	rnpc3	97	53.012	ENSMFAG00000002004	RNPC3	96	53.175	Macaca_fascicularis
ENSPMEG00000003663	rnpc3	79	49.537	ENSMMUG00000002098	-	85	49.537	Macaca_mulatta
ENSPMEG00000003663	rnpc3	97	52.811	ENSMMUG00000018039	RNPC3	96	52.976	Macaca_mulatta
ENSPMEG00000003663	rnpc3	97	50.000	ENSMNEG00000033950	RNPC3	95	50.198	Macaca_nemestrina
ENSPMEG00000003663	rnpc3	97	53.012	ENSMLEG00000033628	RNPC3	96	53.175	Mandrillus_leucophaeus
ENSPMEG00000003663	rnpc3	97	41.903	ENSMLEG00000034644	-	95	40.514	Mandrillus_leucophaeus
ENSPMEG00000003663	rnpc3	99	69.320	ENSMAMG00000007496	rnpc3	99	70.276	Mastacembelus_armatus
ENSPMEG00000003663	rnpc3	99	79.377	ENSMZEG00005020233	rnpc3	99	79.377	Maylandia_zebra
ENSPMEG00000003663	rnpc3	89	54.386	ENSMGAG00000006381	RNPC3	99	54.230	Meleagris_gallopavo
ENSPMEG00000003663	rnpc3	97	54.527	ENSMAUG00000001358	Rnpc3	96	54.291	Mesocricetus_auratus
ENSPMEG00000003663	rnpc3	97	53.213	ENSMICG00000029591	RNPC3	95	53.400	Microcebus_murinus
ENSPMEG00000003663	rnpc3	97	54.016	ENSMOCG00000013423	Rnpc3	96	53.785	Microtus_ochrogaster
ENSPMEG00000003663	rnpc3	99	71.825	ENSMMOG00000005309	rnpc3	99	72.817	Mola_mola
ENSPMEG00000003663	rnpc3	97	53.614	ENSMODG00000002946	RNPC3	95	53.831	Monodelphis_domestica
ENSPMEG00000003663	rnpc3	98	72.817	ENSMALG00000015471	rnpc3	99	72.817	Monopterus_albus
ENSPMEG00000003663	rnpc3	97	54.234	MGP_CAROLIEiJ_G0025555	Rnpc3	96	54.234	Mus_caroli
ENSPMEG00000003663	rnpc3	97	53.815	ENSMUSG00000027981	Rnpc3	99	52.128	Mus_musculus
ENSPMEG00000003663	rnpc3	97	53.586	MGP_PahariEiJ_G0027001	Rnpc3	97	53.586	Mus_pahari
ENSPMEG00000003663	rnpc3	97	50.778	MGP_SPRETEiJ_G0026505	Rnpc3	96	53.815	Mus_spretus
ENSPMEG00000003663	rnpc3	97	53.629	ENSMPUG00000007349	RNPC3	96	53.400	Mustela_putorius_furo
ENSPMEG00000003663	rnpc3	96	54.656	ENSMLUG00000028743	RNPC3	96	54.418	Myotis_lucifugus
ENSPMEG00000003663	rnpc3	97	53.722	ENSNGAG00000010939	Rnpc3	96	53.386	Nannospalax_galili
ENSPMEG00000003663	rnpc3	99	80.079	ENSNBRG00000012196	rnpc3	99	78.736	Neolamprologus_brichardi
ENSPMEG00000003663	rnpc3	97	53.119	ENSNLEG00000012013	RNPC3	96	53.280	Nomascus_leucogenys
ENSPMEG00000003663	rnpc3	97	52.429	ENSODEG00000007612	RNPC3	96	52.305	Octodon_degus
ENSPMEG00000003663	rnpc3	99	80.588	ENSONIG00000004770	rnpc3	100	81.504	Oreochromis_niloticus
ENSPMEG00000003663	rnpc3	91	54.915	ENSOANG00000008220	RNPC3	99	53.419	Ornithorhynchus_anatinus
ENSPMEG00000003663	rnpc3	97	53.106	ENSOCUG00000004016	RNPC3	95	53.200	Oryctolagus_cuniculus
ENSPMEG00000003663	rnpc3	100	78.389	ENSORLG00000005694	rnpc3	100	78.431	Oryzias_latipes
ENSPMEG00000003663	rnpc3	100	78.782	ENSORLG00020005513	rnpc3	100	78.824	Oryzias_latipes_hni
ENSPMEG00000003663	rnpc3	100	78.389	ENSORLG00015002179	rnpc3	100	78.431	Oryzias_latipes_hsok
ENSPMEG00000003663	rnpc3	99	79.010	ENSOMEG00000017737	rnpc3	99	79.051	Oryzias_melastigma
ENSPMEG00000003663	rnpc3	97	53.479	ENSOGAG00000026182	RNPC3	96	53.571	Otolemur_garnettii
ENSPMEG00000003663	rnpc3	97	53.877	ENSOARG00000018719	RNPC3	95	53.614	Ovis_aries
ENSPMEG00000003663	rnpc3	97	52.906	ENSPPAG00000037459	RNPC3	96	53.069	Pan_paniscus
ENSPMEG00000003663	rnpc3	97	47.686	ENSPPAG00000030278	-	97	47.189	Pan_paniscus
ENSPMEG00000003663	rnpc3	97	53.600	ENSPPRG00000020246	RNPC3	96	53.600	Panthera_pardus
ENSPMEG00000003663	rnpc3	97	53.600	ENSPTIG00000009887	RNPC3	97	53.600	Panthera_tigris_altaica
ENSPMEG00000003663	rnpc3	97	46.964	ENSPTRG00000044227	-	97	46.761	Pan_troglodytes
ENSPMEG00000003663	rnpc3	97	52.811	ENSPTRG00000033902	RNPC3	96	52.976	Pan_troglodytes
ENSPMEG00000003663	rnpc3	97	42.063	ENSPANG00000029957	-	51	46.559	Papio_anubis
ENSPMEG00000003663	rnpc3	97	53.119	ENSPANG00000012137	RNPC3	96	53.280	Papio_anubis
ENSPMEG00000003663	rnpc3	99	64.554	ENSPKIG00000008828	rnpc3	98	61.569	Paramormyrops_kingsleyae
ENSPMEG00000003663	rnpc3	65	52.553	ENSPSIG00000007396	RNPC3	99	52.853	Pelodiscus_sinensis
ENSPMEG00000003663	rnpc3	99	64.202	ENSPMGG00000011742	rnpc3	99	63.922	Periophthalmus_magnuspinnatus
ENSPMEG00000003663	rnpc3	92	50.955	ENSPEMG00000020112	Rnpc3	99	52.402	Peromyscus_maniculatus_bairdii
ENSPMEG00000003663	rnpc3	97	54.141	ENSPCIG00000004415	-	95	54.141	Phascolarctos_cinereus
ENSPMEG00000003663	rnpc3	100	99.803	ENSPFOG00000009895	rnpc3	100	99.803	Poecilia_formosa
ENSPMEG00000003663	rnpc3	100	98.619	ENSPLAG00000012023	rnpc3	100	98.619	Poecilia_latipinna
ENSPMEG00000003663	rnpc3	100	98.225	ENSPREG00000010206	rnpc3	100	98.225	Poecilia_reticulata
ENSPMEG00000003663	rnpc3	81	49.161	ENSPPYG00000001102	RNPC3	95	49.409	Pongo_abelii
ENSPMEG00000003663	rnpc3	99	79.487	ENSPNYG00000020603	rnpc3	99	79.528	Pundamilia_nyererei
ENSPMEG00000003663	rnpc3	97	54.217	ENSRNOG00000017310	Rnpc3	95	54.217	Rattus_norvegicus
ENSPMEG00000003663	rnpc3	97	49.299	ENSRBIG00000043897	RNPC3	95	49.505	Rhinopithecus_bieti
ENSPMEG00000003663	rnpc3	97	53.012	ENSRROG00000032334	RNPC3	96	53.175	Rhinopithecus_roxellana
ENSPMEG00000003663	rnpc3	97	52.495	ENSSBOG00000024473	RNPC3	96	52.883	Saimiri_boliviensis_boliviensis
ENSPMEG00000003663	rnpc3	97	53.722	ENSSHAG00000011859	RNPC3	95	53.815	Sarcophilus_harrisii
ENSPMEG00000003663	rnpc3	97	68.072	ENSSFOG00015013055	rnpc3	97	67.800	Scleropages_formosus
ENSPMEG00000003663	rnpc3	99	76.758	ENSSMAG00000020346	rnpc3	99	74.074	Scophthalmus_maximus
ENSPMEG00000003663	rnpc3	99	78.627	ENSSDUG00000006600	rnpc3	99	78.865	Seriola_dumerili
ENSPMEG00000003663	rnpc3	99	78.627	ENSSLDG00000007979	rnpc3	99	78.865	Seriola_lalandi_dorsalis
ENSPMEG00000003663	rnpc3	95	56.823	ENSSPUG00000008539	-	92	56.137	Sphenodon_punctatus
ENSPMEG00000003663	rnpc3	96	52.515	ENSSPUG00000003872	-	92	52.515	Sphenodon_punctatus
ENSPMEG00000003663	rnpc3	99	80.517	ENSSPAG00000005633	rnpc3	99	80.318	Stegastes_partitus
ENSPMEG00000003663	rnpc3	97	51.953	ENSSSCG00000037254	RNPC3	95	52.008	Sus_scrofa
ENSPMEG00000003663	rnpc3	89	55.580	ENSTGUG00000004795	-	99	54.148	Taeniopygia_guttata
ENSPMEG00000003663	rnpc3	99	73.913	ENSTNIG00000018963	rnpc3	99	74.213	Tetraodon_nigroviridis
ENSPMEG00000003663	rnpc3	97	53.213	ENSUMAG00000007775	RNPC3	97	53.082	Ursus_maritimus
ENSPMEG00000003663	rnpc3	97	53.521	ENSVVUG00000000331	RNPC3	96	53.293	Vulpes_vulpes
ENSPMEG00000003663	rnpc3	97	43.307	ENSXETG00000025027	rnpc3	97	43.168	Xenopus_tropicalis
ENSPMEG00000003663	rnpc3	100	91.120	ENSXCOG00000005013	rnpc3	100	92.278	Xiphophorus_couchianus
ENSPMEG00000003663	rnpc3	100	95.874	ENSXMAG00000006495	rnpc3	100	95.874	Xiphophorus_maculatus