EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSPMEG00000003696 (Gene tree)
Gene ID: 106930178
Gene Symbol: rnaseh2c
Alias: -
Full Name: ribonuclease H2 subunit C
Gene Type: protein_coding
Species: Poecilia_mexicana
Status: putative
Strand: Plus strand
Length: 2172 bases
Position: chrKQ551036.1:62453-64624
Accession: 106930178
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSPMEP00000002639	RNase_H2_suC	PF08615.11	1.3e-17	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSPMET00000012188	-	755	XM_015007580	ENSPMEP00000002639	136 (aa)	XP_014863066	UPI00072E6D77

Gene Model

Click here to download ENSPMEG00000003696's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSPMEG00000003696's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSPMEG00000003696	rnaseh2c	100	81.618	ENSAPOG00000012901	rnaseh2c	99	81.618	Acanthochromis_polyacanthus
ENSPMEG00000003696	rnaseh2c	100	75.735	ENSACIG00000022433	rnaseh2c	100	75.735	Amphilophus_citrinellus
ENSPMEG00000003696	rnaseh2c	100	80.882	ENSAOCG00000016855	rnaseh2c	100	80.882	Amphiprion_ocellaris
ENSPMEG00000003696	rnaseh2c	100	81.618	ENSAPEG00000009850	rnaseh2c	100	81.618	Amphiprion_percula
ENSPMEG00000003696	rnaseh2c	100	78.676	ENSATEG00000014395	rnaseh2c	100	78.676	Anabas_testudineus
ENSPMEG00000003696	rnaseh2c	100	75.735	ENSACLG00000016950	rnaseh2c	100	75.735	Astatotilapia_calliptera
ENSPMEG00000003696	rnaseh2c	99	65.185	ENSAMXG00000001210	rnaseh2c	100	65.185	Astyanax_mexicanus
ENSPMEG00000003696	rnaseh2c	99	49.254	ENSCPBG00000023408	-	96	49.254	Chrysemys_picta_bellii
ENSPMEG00000003696	rnaseh2c	100	75.000	ENSCSEG00000005808	rnaseh2c	99	75.000	Cynoglossus_semilaevis
ENSPMEG00000003696	rnaseh2c	100	89.706	ENSCVAG00000006337	rnaseh2c	100	89.706	Cyprinodon_variegatus
ENSPMEG00000003696	rnaseh2c	100	64.706	ENSDARG00000089637	rnaseh2c	99	64.706	Danio_rerio
ENSPMEG00000003696	rnaseh2c	81	50.000	ENSEBUG00000014939	rnaseh2c	74	50.000	Eptatretus_burgeri
ENSPMEG00000003696	rnaseh2c	99	66.667	ENSELUG00000007345	rnaseh2c	99	66.667	Esox_lucius
ENSPMEG00000003696	rnaseh2c	96	90.000	ENSFHEG00000002419	rnaseh2c	95	90.000	Fundulus_heteroclitus
ENSPMEG00000003696	rnaseh2c	65	73.034	ENSGMOG00000008727	rnaseh2c	99	73.034	Gadus_morhua
ENSPMEG00000003696	rnaseh2c	100	92.647	ENSGAFG00000016755	rnaseh2c	83	92.647	Gambusia_affinis
ENSPMEG00000003696	rnaseh2c	99	50.000	ENSGAGG00000008193	-	96	50.000	Gopherus_agassizii
ENSPMEG00000003696	rnaseh2c	100	77.206	ENSHBUG00000012806	rnaseh2c	100	77.206	Haplochromis_burtoni
ENSPMEG00000003696	rnaseh2c	100	69.853	ENSHCOG00000007177	rnaseh2c	100	69.853	Hippocampus_comes
ENSPMEG00000003696	rnaseh2c	100	62.500	ENSIPUG00000018044	rnaseh2c	100	62.500	Ictalurus_punctatus
ENSPMEG00000003696	rnaseh2c	100	79.412	ENSKMAG00000004184	rnaseh2c	100	79.412	Kryptolebias_marmoratus
ENSPMEG00000003696	rnaseh2c	100	78.102	ENSLBEG00000005742	rnaseh2c	100	78.102	Labrus_bergylta
ENSPMEG00000003696	rnaseh2c	95	55.814	ENSLACG00000010120	-	93	55.303	Latimeria_chalumnae
ENSPMEG00000003696	rnaseh2c	100	74.265	ENSMAMG00000021610	rnaseh2c	100	74.265	Mastacembelus_armatus
ENSPMEG00000003696	rnaseh2c	100	76.471	ENSMZEG00005004796	rnaseh2c	100	76.471	Maylandia_zebra
ENSPMEG00000003696	rnaseh2c	100	75.735	ENSMMOG00000002869	rnaseh2c	100	75.735	Mola_mola
ENSPMEG00000003696	rnaseh2c	100	79.562	ENSMALG00000012198	rnaseh2c	100	79.562	Monopterus_albus
ENSPMEG00000003696	rnaseh2c	100	77.206	ENSNBRG00000001462	rnaseh2c	100	77.206	Neolamprologus_brichardi
ENSPMEG00000003696	rnaseh2c	100	76.471	ENSONIG00000005338	rnaseh2c	99	76.471	Oreochromis_niloticus
ENSPMEG00000003696	rnaseh2c	100	72.794	ENSORLG00000023473	rnaseh2c	100	72.794	Oryzias_latipes
ENSPMEG00000003696	rnaseh2c	100	72.794	ENSORLG00020019053	rnaseh2c	91	72.794	Oryzias_latipes_hni
ENSPMEG00000003696	rnaseh2c	100	74.265	ENSORLG00015017067	rnaseh2c	91	74.265	Oryzias_latipes_hsok
ENSPMEG00000003696	rnaseh2c	100	71.324	ENSOMEG00000018607	rnaseh2c	100	71.324	Oryzias_melastigma
ENSPMEG00000003696	rnaseh2c	100	56.618	ENSPKIG00000019331	rnaseh2c	100	56.618	Paramormyrops_kingsleyae
ENSPMEG00000003696	rnaseh2c	100	98.529	ENSPFOG00000009415	rnaseh2c	100	98.529	Poecilia_formosa
ENSPMEG00000003696	rnaseh2c	100	97.059	ENSPLAG00000023330	rnaseh2c	100	97.059	Poecilia_latipinna
ENSPMEG00000003696	rnaseh2c	100	85.034	ENSPREG00000015384	rnaseh2c	73	85.034	Poecilia_reticulata
ENSPMEG00000003696	rnaseh2c	100	77.206	ENSPNYG00000014766	rnaseh2c	100	77.206	Pundamilia_nyererei
ENSPMEG00000003696	rnaseh2c	100	62.500	ENSPNAG00000019111	rnaseh2c	99	62.963	Pygocentrus_nattereri
ENSPMEG00000003696	rnaseh2c	99	64.444	ENSSFOG00015005760	rnaseh2c	99	64.444	Scleropages_formosus
ENSPMEG00000003696	rnaseh2c	100	75.735	ENSSMAG00000017738	rnaseh2c	100	75.735	Scophthalmus_maximus
ENSPMEG00000003696	rnaseh2c	100	78.676	ENSSDUG00000017285	rnaseh2c	100	78.676	Seriola_dumerili
ENSPMEG00000003696	rnaseh2c	100	80.147	ENSSLDG00000016030	rnaseh2c	100	80.147	Seriola_lalandi_dorsalis
ENSPMEG00000003696	rnaseh2c	93	50.382	ENSSPUG00000000842	-	86	50.382	Sphenodon_punctatus
ENSPMEG00000003696	rnaseh2c	100	76.471	ENSSPAG00000007536	rnaseh2c	100	76.471	Stegastes_partitus
ENSPMEG00000003696	rnaseh2c	100	69.118	ENSTRUG00000021845	rnaseh2c	100	69.118	Takifugu_rubripes
ENSPMEG00000003696	rnaseh2c	100	74.265	ENSTNIG00000000431	rnaseh2c	100	74.265	Tetraodon_nigroviridis
ENSPMEG00000003696	rnaseh2c	99	45.255	ENSXETG00000032466	-	100	45.255	Xenopus_tropicalis
ENSPMEG00000003696	rnaseh2c	100	89.706	ENSXCOG00000001611	rnaseh2c	100	89.706	Xiphophorus_couchianus
ENSPMEG00000003696	rnaseh2c	100	91.912	ENSXMAG00000003147	rnaseh2c	83	91.912	Xiphophorus_maculatus