EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSPMEG00000003715 (Gene tree)
Gene ID: -
Gene Symbol: -
Alias: -
Full Name: -
Gene Type: protein_coding
Species: Poecilia_mexicana
Status: putative
Strand: Plus strand
Length: 6039 bases
Position: chrKQ554252.1:13900-19938
Accession: -
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSPMEP00000022667	RVT_1	PF00078.27	7.2e-21	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSPMET00000012149	-	894	-	ENSPMEP00000022667	297 (aa)	-	-

Gene Model

Click here to download ENSPMEG00000003715's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSPMEG00000003715's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSPMEG00000003715	-	90	32.959	ENSPMEG00000016120	-	91	34.082
ENSPMEG00000003715	-	76	30.131	ENSPMEG00000015812	-	84	30.131
ENSPMEG00000003715	-	72	30.769	ENSPMEG00000004673	-	54	30.769

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSPMEG00000003715	-	65	40.415	ENSACIG00000023684	-	87	40.415	Amphilophus_citrinellus
ENSPMEG00000003715	-	78	60.515	ENSACIG00000022447	-	84	60.515	Amphilophus_citrinellus
ENSPMEG00000003715	-	89	42.586	ENSAOCG00000004500	-	70	42.586	Amphiprion_ocellaris
ENSPMEG00000003715	-	71	43.396	ENSAOCG00000018248	-	83	43.396	Amphiprion_ocellaris
ENSPMEG00000003715	-	70	38.967	ENSACAG00000010816	-	60	38.967	Anolis_carolinensis
ENSPMEG00000003715	-	65	57.812	ENSACLG00000012369	-	65	57.812	Astatotilapia_calliptera
ENSPMEG00000003715	-	93	38.571	ENSACLG00000010837	-	67	38.571	Astatotilapia_calliptera
ENSPMEG00000003715	-	82	39.918	ENSAMXG00000040763	-	62	39.918	Astyanax_mexicanus
ENSPMEG00000003715	-	95	74.021	ENSCVAG00000000484	-	96	74.021	Cyprinodon_variegatus
ENSPMEG00000003715	-	65	38.144	ENSHBUG00000023598	-	71	38.144	Haplochromis_burtoni
ENSPMEG00000003715	-	92	31.206	ENSIPUG00000010242	-	73	31.206	Ictalurus_punctatus
ENSPMEG00000003715	-	92	40.441	ENSLACG00000022376	-	58	40.441	Latimeria_chalumnae
ENSPMEG00000003715	-	92	40.876	ENSLACG00000022331	-	82	40.876	Latimeria_chalumnae
ENSPMEG00000003715	-	99	36.482	ENSMZEG00005006211	-	74	36.482	Maylandia_zebra
ENSPMEG00000003715	-	80	40.833	ENSMMOG00000007110	-	86	40.833	Mola_mola
ENSPMEG00000003715	-	77	42.241	ENSMMOG00000003125	-	75	42.241	Mola_mola
ENSPMEG00000003715	-	76	32.759	ENSNBRG00000016257	-	78	33.184	Neolamprologus_brichardi
ENSPMEG00000003715	-	93	40.942	ENSORLG00000030126	-	63	40.942	Oryzias_latipes
ENSPMEG00000003715	-	89	43.561	ENSORLG00000028976	-	69	43.561	Oryzias_latipes
ENSPMEG00000003715	-	93	39.711	ENSORLG00000028706	-	55	39.711	Oryzias_latipes
ENSPMEG00000003715	-	72	44.860	ENSORLG00020007779	-	56	44.860	Oryzias_latipes_hni
ENSPMEG00000003715	-	72	44.860	ENSORLG00020018629	-	56	44.860	Oryzias_latipes_hni
ENSPMEG00000003715	-	53	49.045	ENSORLG00020022004	-	54	49.045	Oryzias_latipes_hni
ENSPMEG00000003715	-	89	40.755	ENSORLG00020016429	-	51	40.755	Oryzias_latipes_hni
ENSPMEG00000003715	-	93	41.304	ENSORLG00015007976	-	73	41.304	Oryzias_latipes_hsok
ENSPMEG00000003715	-	82	45.267	ENSORLG00015021206	-	50	45.267	Oryzias_latipes_hsok
ENSPMEG00000003715	-	81	42.149	ENSORLG00015007703	-	61	42.149	Oryzias_latipes_hsok
ENSPMEG00000003715	-	93	38.989	ENSOMEG00000022009	-	59	38.989	Oryzias_melastigma
ENSPMEG00000003715	-	90	37.687	ENSOMEG00000008379	-	83	39.179	Oryzias_melastigma
ENSPMEG00000003715	-	69	32.850	ENSOMEG00000022778	-	50	32.850	Oryzias_melastigma
ENSPMEG00000003715	-	57	44.118	ENSPKIG00000013511	-	59	44.118	Paramormyrops_kingsleyae
ENSPMEG00000003715	-	52	38.961	ENSPMGG00000010144	-	62	38.961	Periophthalmus_magnuspinnatus
ENSPMEG00000003715	-	84	34.263	ENSPLAG00000008560	-	76	34.263	Poecilia_latipinna
ENSPMEG00000003715	-	96	46.341	ENSPREG00000006501	-	52	46.341	Poecilia_reticulata
ENSPMEG00000003715	-	79	44.118	ENSPNYG00000012547	-	76	44.118	Pundamilia_nyererei
ENSPMEG00000003715	-	64	41.146	ENSPNYG00000022953	-	82	41.146	Pundamilia_nyererei
ENSPMEG00000003715	-	61	30.055	ENSPNYG00000006014	-	71	30.055	Pundamilia_nyererei
ENSPMEG00000003715	-	58	43.023	ENSPNYG00000000591	-	78	43.023	Pundamilia_nyererei
ENSPMEG00000003715	-	89	41.353	ENSPNAG00000014375	-	64	41.353	Pygocentrus_nattereri
ENSPMEG00000003715	-	75	34.821	ENSSLDG00000008400	-	92	34.821	Seriola_lalandi_dorsalis
ENSPMEG00000003715	-	78	33.617	ENSXETG00000031743	-	94	33.617	Xenopus_tropicalis