EuRBPDB

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  • Description
  • RBDs
  • Transcripts
  • Gene Model
  • PPI
  • Paralogs
  • Orthologs
Description
Ensembl ID
ENSPMEG00000003725 (Gene tree)
Gene ID
106927652
Gene Symbol
smarca4a
Alias
-
Full Name
SWI/SNF related%2C matrix associated%2C actin dependent regulator of chromatin%2C subfamily a%2C member 4
Gene Type
protein_coding
Species
Poecilia_mexicana
Status
putative
Strand
Minus strand
Length
17384 bases
Position
chrKQ551947.1:207050-224433
Accession
106927652
RBP type
canonical RBP
Summary
-
RNA binding domains(RBDs)
Protein IDDomain Pfam IDE-value Domain number Total number
ENSPMEP00000022628ResIIIPF04851.153.3e-0911
ENSPMEP00000022634ResIIIPF04851.155.1e-0911
ENSPMEP00000022634BRKPF07533.166.5e-1711
ENSPMEP00000022628BRKPF07533.166.9e-1711
Transcripts
Transcript IDNameLengthRefSeq ID Protein IDLengthRefSeq IDUniportKB ID
ENSPMET00000012248-5103XM_015003355ENSPMEP000000226281610 (aa)XP_014858841-
ENSPMET00000012233-4614-ENSPMEP000000226341537 (aa)--
Gene Model
Click here to download ENSPMEG00000003725's gene model file
Protein-Protein Interaction (PPI)

Clik here to download ENSPMEG00000003725's network
Paralogs
Ensembl IDGene SymbolCoverageIdentiy ParalogGene SymbolCoverageIdentiy
ENSPMEG00000003725smarca4a9772.383ENSPMEG00000001815-8876.386
ENSPMEG00000003725smarca4a9982.947ENSPMEG00000008929-9784.277
Orthologs
Ensembl IDGene SymbolCoverageIdentiy OrthologGene SymbolCoverageIdentiy Species
ENSPMEG00000003725smarca4a9787.636ENSG00000127616SMARCA499100.000Homo_sapiens
ENSPMEG00000003725smarca4a7887.339ENSAPOG00000003509smarca4a9985.422Acanthochromis_polyacanthus
ENSPMEG00000003725smarca4a9682.857ENSAPOG00000004542SMARCA49882.838Acanthochromis_polyacanthus
ENSPMEG00000003725smarca4a9783.395ENSAMEG00000010868SMARCA48185.799Ailuropoda_melanoleuca
ENSPMEG00000003725smarca4a9682.542ENSACIG00000003035-8390.348Amphilophus_citrinellus
ENSPMEG00000003725smarca4a9693.154ENSACIG00000021550smarca4a9492.588Amphilophus_citrinellus
ENSPMEG00000003725smarca4a9585.250ENSAOCG00000009450-9785.464Amphiprion_ocellaris
ENSPMEG00000003725smarca4a9188.467ENSAOCG00000019167smarca4a10087.739Amphiprion_ocellaris
ENSPMEG00000003725smarca4a9188.535ENSAPEG00000015559smarca4a10087.615Amphiprion_percula
ENSPMEG00000003725smarca4a9981.246ENSAPEG00000023108-9583.147Amphiprion_percula
ENSPMEG00000003725smarca4a9691.619ENSATEG00000011524smarca4a9591.629Anabas_testudineus
ENSPMEG00000003725smarca4a9981.347ENSATEG00000001094-8886.027Anabas_testudineus
ENSPMEG00000003725smarca4a9787.404ENSANAG00000036991SMARCA49583.111Aotus_nancymaae
ENSPMEG00000003725smarca4a9692.843ENSACLG00000000163smarca4a9692.342Astatotilapia_calliptera
ENSPMEG00000003725smarca4a9683.603ENSACLG00000008638-9883.250Astatotilapia_calliptera
ENSPMEG00000003725smarca4a9585.168ENSAMXG00000011238-9489.728Astyanax_mexicanus
ENSPMEG00000003725smarca4a9783.992ENSAMXG00000021023smarca4a9883.506Astyanax_mexicanus
ENSPMEG00000003725smarca4a9787.068ENSBTAG00000019220SMARCA49386.239Bos_taurus
ENSPMEG00000003725smarca4a9783.405ENSCJAG00000005936SMARCA49581.824Callithrix_jacchus
ENSPMEG00000003725smarca4a9787.452ENSCAFG00000017584SMARCA48090.683Canis_familiaris
ENSPMEG00000003725smarca4a9787.452ENSCAFG00020024620SMARCA49683.743Canis_lupus_dingo
ENSPMEG00000003725smarca4a9782.864ENSCHIG00000015318SMARCA49382.068Capra_hircus
ENSPMEG00000003725smarca4a9787.340ENSTSYG00000012966SMARCA49586.364Carlito_syrichta
ENSPMEG00000003725smarca4a9380.680ENSCAPG00000015932SMARCA49389.437Cavia_aperea
ENSPMEG00000003725smarca4a9687.460ENSCPOG00000015549SMARCA48090.683Cavia_porcellus
ENSPMEG00000003725smarca4a9785.074ENSCCAG00000031660SMARCA49383.941Cebus_capucinus
ENSPMEG00000003725smarca4a9787.580ENSCATG00000029530SMARCA49682.671Cercocebus_atys
ENSPMEG00000003725smarca4a9687.043ENSCLAG00000011946SMARCA49586.300Chinchilla_lanigera
ENSPMEG00000003725smarca4a9687.020ENSCPBG00000009994SMARCA49586.288Chrysemys_picta_bellii
ENSPMEG00000003725smarca4a9787.580ENSCANG00000036013SMARCA49387.961Colobus_angolensis_palliatus
ENSPMEG00000003725smarca4a9787.324ENSCGRG00001016732Smarca49586.253Cricetulus_griseus_chok1gshd
ENSPMEG00000003725smarca4a9787.324ENSCGRG00000017242Smarca49586.253Cricetulus_griseus_crigri
ENSPMEG00000003725smarca4a9391.694ENSCSEG00000014771smarca4a9591.118Cynoglossus_semilaevis
ENSPMEG00000003725smarca4a9585.640ENSCVAG00000003018-9685.510Cyprinodon_variegatus
ENSPMEG00000003725smarca4a9896.013ENSCVAG00000006979smarca4a9796.013Cyprinodon_variegatus
ENSPMEG00000003725smarca4a9382.218ENSDARG00000104339SMARCA49482.649Danio_rerio
ENSPMEG00000003725smarca4a9689.017ENSDARG00000077226smarca4a9588.712Danio_rerio
ENSPMEG00000003725smarca4a9680.187ENSDNOG00000048847SMARCA49090.791Dasypus_novemcinctus
ENSPMEG00000003725smarca4a8681.674ENSDORG00000002544Smarca49279.531Dipodomys_ordii
ENSPMEG00000003725smarca4a9576.046ENSETEG00000013361SMARCA49474.747Echinops_telfairi
ENSPMEG00000003725smarca4a9787.388ENSEASG00005006167SMARCA49387.202Equus_asinus_asinus
ENSPMEG00000003725smarca4a9787.452ENSECAG00000008334SMARCA48090.606Equus_caballus
ENSPMEG00000003725smarca4a9976.781ENSELUG00000023232-9485.581Esox_lucius
ENSPMEG00000003725smarca4a9788.615ENSELUG00000010247smarca4a9985.272Esox_lucius
ENSPMEG00000003725smarca4a9787.348ENSFCAG00000004894SMARCA49584.095Felis_catus
ENSPMEG00000003725smarca4a7490.947ENSFALG00000004208SMARCA49283.555Ficedula_albicollis
ENSPMEG00000003725smarca4a9386.746ENSFDAG00000012237SMARCA49785.639Fukomys_damarensis
ENSPMEG00000003725smarca4a9684.543ENSFHEG00000007902-9583.750Fundulus_heteroclitus
ENSPMEG00000003725smarca4a9896.285ENSFHEG00000010182smarca4a9796.285Fundulus_heteroclitus
ENSPMEG00000003725smarca4a8882.023ENSGMOG00000005756-8781.448Gadus_morhua
ENSPMEG00000003725smarca4a8590.678ENSGMOG00000002649smarca4a8990.625Gadus_morhua
ENSPMEG00000003725smarca4a7585.655ENSGALG00000047145SMARCA410084.831Gallus_gallus
ENSPMEG00000003725smarca4a8998.674ENSGAFG00000014900smarca4a9698.674Gambusia_affinis
ENSPMEG00000003725smarca4a9980.541ENSGAFG00000008827-9880.051Gambusia_affinis
ENSPMEG00000003725smarca4a9779.643ENSGACG00000016033-9678.840Gasterosteus_aculeatus
ENSPMEG00000003725smarca4a9490.301ENSGACG00000006691smarca4a9589.783Gasterosteus_aculeatus
ENSPMEG00000003725smarca4a9687.252ENSGAGG00000016757SMARCA49586.518Gopherus_agassizii
ENSPMEG00000003725smarca4a9787.580ENSGGOG00000009882SMARCA49382.671Gorilla_gorilla
ENSPMEG00000003725smarca4a9693.031ENSHBUG00000021172smarca4a9592.273Haplochromis_burtoni
ENSPMEG00000003725smarca4a9684.118ENSHBUG00000005447-9583.887Haplochromis_burtoni
ENSPMEG00000003725smarca4a9687.173ENSHGLG00000010519SMARCA49781.692Heterocephalus_glaber_female
ENSPMEG00000003725smarca4a9686.381ENSHGLG00100013774SMARCA49585.332Heterocephalus_glaber_male
ENSPMEG00000003725smarca4a9691.752ENSHCOG00000009510smarca4a9691.379Hippocampus_comes
ENSPMEG00000003725smarca4a9688.408ENSIPUG00000006107smarca4a9588.393Ictalurus_punctatus
ENSPMEG00000003725smarca4a9483.683ENSIPUG00000016346-8089.311Ictalurus_punctatus
ENSPMEG00000003725smarca4a9787.388ENSSTOG00000007939SMARCA49583.907Ictidomys_tridecemlineatus
ENSPMEG00000003725smarca4a9785.517ENSJJAG00000012877Smarca49584.013Jaculus_jaculus
ENSPMEG00000003725smarca4a9893.042ENSKMAG00000011931smarca4a9693.042Kryptolebias_marmoratus
ENSPMEG00000003725smarca4a9685.687ENSKMAG00000019518-9885.247Kryptolebias_marmoratus
ENSPMEG00000003725smarca4a9688.243ENSLBEG00000017383smarca4a9787.023Labrus_bergylta
ENSPMEG00000003725smarca4a9972.033ENSLBEG00000020655-8278.538Labrus_bergylta
ENSPMEG00000003725smarca4a5379.099ENSLACG00000015309SMARCA410078.497Latimeria_chalumnae
ENSPMEG00000003725smarca4a9784.847ENSLOCG00000007820smarca4a9584.468Lepisosteus_oculatus
ENSPMEG00000003725smarca4a9787.476ENSLAFG00000001433SMARCA49782.289Loxodonta_africana
ENSPMEG00000003725smarca4a9787.580ENSMFAG00000032146SMARCA49682.671Macaca_fascicularis
ENSPMEG00000003725smarca4a9787.580ENSMMUG00000012042SMARCA49588.862Macaca_mulatta
ENSPMEG00000003725smarca4a9787.324ENSMNEG00000028512SMARCA49586.381Macaca_nemestrina
ENSPMEG00000003725smarca4a9787.516ENSMLEG00000034976SMARCA49586.280Mandrillus_leucophaeus
ENSPMEG00000003725smarca4a9684.971ENSMAMG00000002841-9885.183Mastacembelus_armatus
ENSPMEG00000003725smarca4a9792.843ENSMAMG00000009256smarca4a9592.204Mastacembelus_armatus
ENSPMEG00000003725smarca4a9692.907ENSMZEG00005003889smarca4a9592.278Maylandia_zebra
ENSPMEG00000003725smarca4a9684.181ENSMZEG00005023861-9883.950Maylandia_zebra
ENSPMEG00000003725smarca4a9787.029ENSMAUG00000020731Smarca49983.136Mesocricetus_auratus
ENSPMEG00000003725smarca4a9787.348ENSMICG00000009806SMARCA49582.443Microcebus_murinus
ENSPMEG00000003725smarca4a9786.965ENSMOCG00000022209Smarca49585.897Microtus_ochrogaster
ENSPMEG00000003725smarca4a9980.589ENSMMOG00000008466-9879.705Mola_mola
ENSPMEG00000003725smarca4a9690.147ENSMMOG00000007571smarca4a9889.010Mola_mola
ENSPMEG00000003725smarca4a9786.082ENSMODG00000006287SMARCA48088.039Monodelphis_domestica
ENSPMEG00000003725smarca4a9182.084ENSMALG00000021534-9980.899Monopterus_albus
ENSPMEG00000003725smarca4a9392.568ENSMALG00000003388smarca4a9592.013Monopterus_albus
ENSPMEG00000003725smarca4a9787.252MGP_CAROLIEiJ_G0031879Smarca49686.689Mus_caroli
ENSPMEG00000003725smarca4a9787.252ENSMUSG00000032187Smarca49686.689Mus_musculus
ENSPMEG00000003725smarca4a9786.996MGP_PahariEiJ_G0014745Smarca49686.689Mus_pahari
ENSPMEG00000003725smarca4a9787.252MGP_SPRETEiJ_G0033003Smarca49686.689Mus_spretus
ENSPMEG00000003725smarca4a9787.452ENSMPUG00000005711SMARCA48090.683Mustela_putorius_furo
ENSPMEG00000003725smarca4a9787.404ENSMLUG00000004491-8090.683Myotis_lucifugus
ENSPMEG00000003725smarca4a9786.748ENSNGAG00000021852Smarca49585.870Nannospalax_galili
ENSPMEG00000003725smarca4a9180.556ENSNBRG00000018865-8490.350Neolamprologus_brichardi
ENSPMEG00000003725smarca4a9689.635ENSNBRG00000011457smarca4a9688.298Neolamprologus_brichardi
ENSPMEG00000003725smarca4a9784.399ENSNLEG00000012389SMARCA49483.483Nomascus_leucogenys
ENSPMEG00000003725smarca4a8189.655ENSOPRG00000000885-7689.655Ochotona_princeps
ENSPMEG00000003725smarca4a9982.631ENSODEG00000017127SMARCA47989.134Octodon_degus
ENSPMEG00000003725smarca4a9684.118ENSONIG00000018040-9583.887Oreochromis_niloticus
ENSPMEG00000003725smarca4a9693.031ENSONIG00000008196smarca4a9592.273Oreochromis_niloticus
ENSPMEG00000003725smarca4a9781.429ENSOCUG00000001787SMARCA49580.907Oryctolagus_cuniculus
ENSPMEG00000003725smarca4a9792.545ENSORLG00000015452smarca4a9591.260Oryzias_latipes
ENSPMEG00000003725smarca4a9383.247ENSORLG00000003955-9283.355Oryzias_latipes
ENSPMEG00000003725smarca4a9383.193ENSORLG00020009728-9283.171Oryzias_latipes_hni
ENSPMEG00000003725smarca4a9792.224ENSORLG00020004611smarca4a9591.260Oryzias_latipes_hni
ENSPMEG00000003725smarca4a9683.031ENSORLG00015007739-9283.225Oryzias_latipes_hsok
ENSPMEG00000003725smarca4a9792.095ENSORLG00015016560smarca4a9591.131Oryzias_latipes_hsok
ENSPMEG00000003725smarca4a9383.561ENSOMEG00000016626-9283.800Oryzias_melastigma
ENSPMEG00000003725smarca4a9692.917ENSOMEG00000007486smarca4a9591.897Oryzias_melastigma
ENSPMEG00000003725smarca4a9185.540ENSOGAG00000016148SMARCA410084.386Otolemur_garnettii
ENSPMEG00000003725smarca4a9786.692ENSOARG00000017454SMARCA49386.182Ovis_aries
ENSPMEG00000003725smarca4a9787.580ENSPPAG00000043191SMARCA49682.671Pan_paniscus
ENSPMEG00000003725smarca4a9787.348ENSPPRG00000000064SMARCA49584.095Panthera_pardus
ENSPMEG00000003725smarca4a9086.120ENSPTIG00000017447SMARCA49484.906Panthera_tigris_altaica
ENSPMEG00000003725smarca4a9787.580ENSPTRG00000010488SMARCA49682.671Pan_troglodytes
ENSPMEG00000003725smarca4a9787.452ENSPANG00000011042SMARCA49486.445Papio_anubis
ENSPMEG00000003725smarca4a9788.599ENSPKIG00000007770SMARCA49587.890Paramormyrops_kingsleyae
ENSPMEG00000003725smarca4a9785.934ENSPKIG00000010087-9286.152Paramormyrops_kingsleyae
ENSPMEG00000003725smarca4a9978.541ENSPSIG00000005547SMARCA48186.340Pelodiscus_sinensis
ENSPMEG00000003725smarca4a9787.029ENSPEMG00000020389Smarca49585.960Peromyscus_maniculatus_bairdii
ENSPMEG00000003725smarca4a9787.908ENSPCIG00000017138SMARCA48090.923Phascolarctos_cinereus
ENSPMEG00000003725smarca4a9899.684ENSPFOG00000007892smarca4a9799.684Poecilia_formosa
ENSPMEG00000003725smarca4a9683.417ENSPFOG00000012930-9583.189Poecilia_formosa
ENSPMEG00000003725smarca4a9899.494ENSPLAG00000014294smarca4a9799.494Poecilia_latipinna
ENSPMEG00000003725smarca4a7890.845ENSPLAG00000018616-9585.605Poecilia_latipinna
ENSPMEG00000003725smarca4a9980.869ENSPREG00000014823-9783.562Poecilia_reticulata
ENSPMEG00000003725smarca4a9898.426ENSPREG00000014608smarca4a9997.353Poecilia_reticulata
ENSPMEG00000003725smarca4a9785.705ENSPPYG00000009568SMARCA49584.095Pongo_abelii
ENSPMEG00000003725smarca4a7794.505ENSPCAG00000014054SMARCA47395.556Procavia_capensis
ENSPMEG00000003725smarca4a9787.580ENSPCOG00000023011SMARCA49486.445Propithecus_coquereli
ENSPMEG00000003725smarca4a9282.036ENSPVAG00000007787SMARCA49178.571Pteropus_vampyrus
ENSPMEG00000003725smarca4a9692.967ENSPNYG00000000717smarca4a9692.209Pundamilia_nyererei
ENSPMEG00000003725smarca4a9582.920ENSPNYG00000023995-8490.269Pundamilia_nyererei
ENSPMEG00000003725smarca4a9685.000ENSPNAG00000006636-8789.340Pygocentrus_nattereri
ENSPMEG00000003725smarca4a9783.474ENSPNAG00000024136smarca4a9783.172Pygocentrus_nattereri
ENSPMEG00000003725smarca4a9787.316ENSRNOG00000009271Smarca48090.443Rattus_norvegicus
ENSPMEG00000003725smarca4a9787.580ENSRBIG00000038696SMARCA49682.671Rhinopithecus_bieti
ENSPMEG00000003725smarca4a9787.580ENSRROG00000045509SMARCA49387.961Rhinopithecus_roxellana
ENSPMEG00000003725smarca4a9787.636ENSSBOG00000026896SMARCA49286.500Saimiri_boliviensis_boliviensis
ENSPMEG00000003725smarca4a9787.844ENSSHAG00000001642SMARCA48091.001Sarcophilus_harrisii
ENSPMEG00000003725smarca4a9789.101ENSSFOG00015013823smarca49588.400Scleropages_formosus
ENSPMEG00000003725smarca4a8890.816ENSSFOG00015009921-9090.683Scleropages_formosus
ENSPMEG00000003725smarca4a9791.260ENSSMAG00000003200smarca4a9590.310Scophthalmus_maximus
ENSPMEG00000003725smarca4a9681.250ENSSMAG00000014082-9581.398Scophthalmus_maximus
ENSPMEG00000003725smarca4a9788.115ENSSDUG00000017298smarca4a9983.584Seriola_dumerili
ENSPMEG00000003725smarca4a9685.824ENSSDUG00000005388-9883.344Seriola_dumerili
ENSPMEG00000003725smarca4a9685.613ENSSLDG00000023663-9785.413Seriola_lalandi_dorsalis
ENSPMEG00000003725smarca4a9792.649ENSSLDG00000024486smarca4a10088.177Seriola_lalandi_dorsalis
ENSPMEG00000003725smarca4a6497.403ENSSARG00000013477SMARCA48197.403Sorex_araneus
ENSPMEG00000003725smarca4a9683.397ENSSPUG00000004558SMARCA49882.529Sphenodon_punctatus
ENSPMEG00000003725smarca4a9792.332ENSSPAG00000004248smarca4a9987.405Stegastes_partitus
ENSPMEG00000003725smarca4a9683.727ENSSPAG00000012533-9583.251Stegastes_partitus
ENSPMEG00000003725smarca4a9787.476ENSSSCG00000013629SMARCA49586.343Sus_scrofa
ENSPMEG00000003725smarca4a5282.088ENSTGUG00000015488-9883.790Taeniopygia_guttata
ENSPMEG00000003725smarca4a9184.766ENSTRUG00000004885smarca4a10083.765Takifugu_rubripes
ENSPMEG00000003725smarca4a9682.186ENSTRUG00000001378SMARCA49882.546Takifugu_rubripes
ENSPMEG00000003725smarca4a7490.747ENSTNIG00000004859-10090.747Tetraodon_nigroviridis
ENSPMEG00000003725smarca4a9783.090ENSTNIG00000004536SMARCA49582.901Tetraodon_nigroviridis
ENSPMEG00000003725smarca4a50100.000ENSTBEG00000000707-52100.000Tupaia_belangeri
ENSPMEG00000003725smarca4a9684.557ENSTTRG00000009519SMARCA49583.093Tursiops_truncatus
ENSPMEG00000003725smarca4a9787.452ENSUAMG00000014661SMARCA48090.683Ursus_americanus
ENSPMEG00000003725smarca4a9780.641ENSUMAG00000022005SMARCA49690.710Ursus_maritimus
ENSPMEG00000003725smarca4a9787.452ENSVVUG00000017820SMARCA49186.317Vulpes_vulpes
ENSPMEG00000003725smarca4a9682.821ENSXETG00000009355smarca49979.659Xenopus_tropicalis
ENSPMEG00000003725smarca4a9684.547ENSXCOG00000013494-9881.603Xiphophorus_couchianus
ENSPMEG00000003725smarca4a9981.853ENSXMAG00000007030-9881.982Xiphophorus_maculatus
ENSPMEG00000003725smarca4a9898.418ENSXMAG00000006321smarca4a9798.418Xiphophorus_maculatus

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