EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSPMEG00000003804 (Gene tree)
Gene ID: -
Gene Symbol: zgc:165603
Alias: -
Full Name: zgc:165603
Gene Type: protein_coding
Species: Poecilia_mexicana
Status: putative
Strand: Plus strand
Length: 34252 bases
Position: chrKQ551159.1:402497-436748
Accession: ZDB-GENE-070620-21
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSPMEP00000002742	RRM_1	PF00076.22	1.1e-15	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSPMET00000012005	-	414	-	ENSPMEP00000002742	137 (aa)	-	-

Gene Model

Click here to download ENSPMEG00000003804's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSPMEG00000003804's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSPMEG00000003804	zgc:165603	65	35.955	ENSPMEG00000011632	-	58	36.364

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSPMEG00000003804	zgc:165603	86	82.353	ENSAOCG00000012598	zgc:165603	66	87.963	Amphiprion_ocellaris
ENSPMEG00000003804	zgc:165603	91	66.929	ENSAMXG00000036838	-	85	72.973	Astyanax_mexicanus
ENSPMEG00000003804	zgc:165603	81	80.769	ENSBTAG00000019131	CELF3	86	80.769	Bos_taurus
ENSPMEG00000003804	zgc:165603	85	71.429	ENSCVAG00000005395	zgc:165603	96	73.649	Cyprinodon_variegatus
ENSPMEG00000003804	zgc:165603	72	84.259	ENSDARG00000098702	zgc:165603	99	67.532	Danio_rerio
ENSPMEG00000003804	zgc:165603	80	64.545	ENSHCOG00000014147	-	86	66.355	Hippocampus_comes
ENSPMEG00000003804	zgc:165603	81	79.130	ENSLACG00000009899	zgc:165603	87	79.130	Latimeria_chalumnae
ENSPMEG00000003804	zgc:165603	80	83.117	ENSMUSG00000034818	Celf5	92	34.884	Mus_musculus
ENSPMEG00000003804	zgc:165603	80	83.117	MGP_SPRETEiJ_G0016461	Celf5	92	34.884	Mus_spretus
ENSPMEG00000003804	zgc:165603	82	90.265	ENSPKIG00000018966	zgc:165603	67	90.265	Paramormyrops_kingsleyae
ENSPMEG00000003804	zgc:165603	81	74.324	ENSPLAG00000009650	zgc:165603	80	74.324	Poecilia_latipinna
ENSPMEG00000003804	zgc:165603	81	80.769	ENSSBOG00000021984	CELF3	97	80.769	Saimiri_boliviensis_boliviensis
ENSPMEG00000003804	zgc:165603	71	35.052	ENSXETG00000012296	celf3	63	38.202	Xenopus_tropicalis