EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSPMEG00000004046 (Gene tree)
Gene ID: 106929934
Gene Symbol: -
Alias: -
Full Name: nucleolin-like
Gene Type: protein_coding
Species: Poecilia_mexicana
Status: putative
Strand: Minus strand
Length: 8830 bases
Position: chrKQ551035.1:502171-511000
Accession: 106929934
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSPMEP00000022878	RRM_1	PF00076.22	1.5e-39	1	4
ENSPMEP00000022878	RRM_1	PF00076.22	1.5e-39	2	4
ENSPMEP00000022878	RRM_1	PF00076.22	1.5e-39	3	4
ENSPMEP00000022878	RRM_1	PF00076.22	1.5e-39	4	4

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSPMET00000011626	-	2657	XM_015007184	ENSPMEP00000022878	489 (aa)	XP_014862670	UPI00072DF713

Gene Model

Click here to download ENSPMEG00000004046's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSPMEG00000004046's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSPMEG00000004046	-	78	41.344	ENSPMEG00000006000	ncl	53	41.162

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSPMEG00000004046	-	80	49.474	ENSACIG00000021941	-	93	46.753	Amphilophus_citrinellus
ENSPMEG00000004046	-	83	44.634	ENSACLG00000009613	-	95	44.634	Astatotilapia_calliptera
ENSPMEG00000004046	-	82	48.900	ENSCSEG00000017388	-	76	48.900	Cynoglossus_semilaevis
ENSPMEG00000004046	-	100	63.265	ENSFHEG00000017265	-	96	63.265	Fundulus_heteroclitus
ENSPMEG00000004046	-	78	39.637	ENSGMOG00000017831	-	99	39.900	Gadus_morhua
ENSPMEG00000004046	-	100	90.816	ENSGAFG00000018408	-	100	90.816	Gambusia_affinis
ENSPMEG00000004046	-	80	44.643	ENSHBUG00000006683	-	93	44.643	Haplochromis_burtoni
ENSPMEG00000004046	-	80	48.744	ENSHCOG00000020361	-	92	48.744	Hippocampus_comes
ENSPMEG00000004046	-	88	59.122	ENSKMAG00000003154	-	90	59.122	Kryptolebias_marmoratus
ENSPMEG00000004046	-	80	44.898	ENSMZEG00005005300	-	93	44.898	Maylandia_zebra
ENSPMEG00000004046	-	81	49.873	ENSMMOG00000018095	-	89	49.873	Mola_mola
ENSPMEG00000004046	-	95	48.626	ENSMALG00000006207	-	89	48.626	Monopterus_albus
ENSPMEG00000004046	-	78	47.120	ENSPMGG00000013705	-	89	48.042	Periophthalmus_magnuspinnatus
ENSPMEG00000004046	-	100	97.778	ENSPFOG00000016767	-	100	97.778	Poecilia_formosa
ENSPMEG00000004046	-	100	96.768	ENSPLAG00000000597	-	100	96.768	Poecilia_latipinna
ENSPMEG00000004046	-	95	92.934	ENSPREG00000007170	-	95	91.770	Poecilia_reticulata
ENSPMEG00000004046	-	80	46.429	ENSPNYG00000000391	-	93	46.429	Pundamilia_nyererei
ENSPMEG00000004046	-	98	45.021	ENSTRUG00000023880	-	94	45.021	Takifugu_rubripes
ENSPMEG00000004046	-	100	90.204	ENSXMAG00000004403	-	100	90.204	Xiphophorus_maculatus