EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSPMEG00000004051 (Gene tree)
Gene ID: 106924304
Gene Symbol: prpf8
Alias: -
Full Name: pre-mRNA processing factor 8
Gene Type: protein_coding
Species: Poecilia_mexicana
Status: putative
Strand: Minus strand
Length: 16080 bases
Position: chrKQ551671.1:103223-119302
Accession: 106924304
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSPMEP00000022812	RRM_4	PF10598.9	3.3e-48	1	1
ENSPMEP00000022801	RRM_4	PF10598.9	3.3e-48	1	1
ENSPMEP00000022801	U5_2-snRNA_bdg	PF10597.9	7.6e-74	1	1
ENSPMEP00000022812	U5_2-snRNA_bdg	PF10597.9	7.8e-74	1	1
ENSPMEP00000022801	PRO8NT	PF08082.11	8.8e-88	1	1
ENSPMEP00000022812	PRO8NT	PF08082.11	8.9e-88	1	1
ENSPMEP00000022801	U6-snRNA_bdg	PF10596.9	1.8e-89	1	1
ENSPMEP00000022812	U6-snRNA_bdg	PF10596.9	1.9e-89	1	1
ENSPMEP00000022812	PROCN	PF08083.11	3.2e-234	1	1
ENSPMEP00000022801	PROCN	PF08083.11	2.7e-206	1	1
ENSPMEP00000022801	PRP8_domainIV	PF12134.8	4.5e-130	1	1
ENSPMEP00000022812	PRP8_domainIV	PF12134.8	4.6e-130	1	1
ENSPMEP00000022801	PROCT	PF08084.11	2.9e-53	1	1
ENSPMEP00000022812	PROCT	PF08084.11	3e-53	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSPMET00000011811	-	6972	-	ENSPMEP00000022801	2323 (aa)	-	-
ENSPMET00000011785	-	7903	XM_014997934	ENSPMEP00000022812	2358 (aa)	XP_014853420	UPI000443E033

Gene Model

Click here to download ENSPMEG00000004051's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSPMEG00000004051's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSPMEG00000004051	prpf8	100	96.990	ENSG00000174231	PRPF8	100	96.990	Homo_sapiens
ENSPMEG00000004051	prpf8	100	98.388	ENSAPOG00000010079	prpf8	100	98.431	Acanthochromis_polyacanthus
ENSPMEG00000004051	prpf8	100	96.990	ENSAMEG00000007940	PRPF8	100	96.990	Ailuropoda_melanoleuca
ENSPMEG00000004051	prpf8	100	97.292	ENSACIG00000018280	prpf8	100	97.292	Amphilophus_citrinellus
ENSPMEG00000004051	prpf8	100	98.346	ENSAOCG00000010725	prpf8	100	98.388	Amphiprion_ocellaris
ENSPMEG00000004051	prpf8	100	98.346	ENSAPEG00000014397	prpf8	100	98.388	Amphiprion_percula
ENSPMEG00000004051	prpf8	100	97.795	ENSATEG00000010062	prpf8	100	97.837	Anabas_testudineus
ENSPMEG00000004051	prpf8	95	98.087	ENSAPLG00000010357	PRPF8	100	98.087	Anas_platyrhynchos
ENSPMEG00000004051	prpf8	82	96.342	ENSACAG00000014784	PRPF8	99	96.342	Anolis_carolinensis
ENSPMEG00000004051	prpf8	100	96.990	ENSANAG00000032629	PRPF8	100	96.990	Aotus_nancymaae
ENSPMEG00000004051	prpf8	100	98.643	ENSACLG00000020858	prpf8	100	98.643	Astatotilapia_calliptera
ENSPMEG00000004051	prpf8	100	97.837	ENSAMXG00000020291	prpf8	100	97.837	Astyanax_mexicanus
ENSPMEG00000004051	prpf8	100	96.990	ENSBTAG00000011488	PRPF8	100	96.990	Bos_taurus
ENSPMEG00000004051	prpf8	98	86.446	WBGene00004187	prp-8	99	86.894	Caenorhabditis_elegans
ENSPMEG00000004051	prpf8	100	96.990	ENSCJAG00000001911	PRPF8	100	96.990	Callithrix_jacchus
ENSPMEG00000004051	prpf8	100	96.990	ENSCAFG00000019221	PRPF8	100	96.990	Canis_familiaris
ENSPMEG00000004051	prpf8	95	98.170	ENSCAFG00020009943	PRPF8	100	98.170	Canis_lupus_dingo
ENSPMEG00000004051	prpf8	100	96.990	ENSCHIG00000017499	PRPF8	100	96.990	Capra_hircus
ENSPMEG00000004051	prpf8	100	96.990	ENSTSYG00000014120	PRPF8	100	96.990	Carlito_syrichta
ENSPMEG00000004051	prpf8	95	95.947	ENSCAPG00000009459	PRPF8	99	95.947	Cavia_aperea
ENSPMEG00000004051	prpf8	100	96.990	ENSCPOG00000010379	PRPF8	100	96.990	Cavia_porcellus
ENSPMEG00000004051	prpf8	100	96.990	ENSCCAG00000031983	-	100	96.990	Cebus_capucinus
ENSPMEG00000004051	prpf8	100	96.990	ENSCATG00000038595	PRPF8	100	96.990	Cercocebus_atys
ENSPMEG00000004051	prpf8	100	96.990	ENSCLAG00000004388	PRPF8	100	96.990	Chinchilla_lanigera
ENSPMEG00000004051	prpf8	100	96.990	ENSCSAG00000013929	PRPF8	100	96.990	Chlorocebus_sabaeus
ENSPMEG00000004051	prpf8	81	97.333	ENSCHOG00000008590	PRPF8	88	97.333	Choloepus_hoffmanni
ENSPMEG00000004051	prpf8	100	96.947	ENSCPBG00000020409	PRPF8	100	96.947	Chrysemys_picta_bellii
ENSPMEG00000004051	prpf8	98	92.637	ENSCSAVG00000007825	-	100	91.366	Ciona_savignyi
ENSPMEG00000004051	prpf8	100	96.990	ENSCANG00000043088	PRPF8	100	96.990	Colobus_angolensis_palliatus
ENSPMEG00000004051	prpf8	74	99.409	ENSCGRG00000005129	Prpf8	100	99.409	Cricetulus_griseus_crigri
ENSPMEG00000004051	prpf8	100	98.219	ENSCSEG00000007905	prpf8	100	98.219	Cynoglossus_semilaevis
ENSPMEG00000004051	prpf8	100	98.049	ENSDARG00000026180	prpf8	100	98.049	Danio_rerio
ENSPMEG00000004051	prpf8	93	97.358	ENSDNOG00000018471	PRPF8	99	97.358	Dasypus_novemcinctus
ENSPMEG00000004051	prpf8	84	95.394	ENSDORG00000006185	Prpf8	96	95.394	Dipodomys_ordii
ENSPMEG00000004051	prpf8	99	91.228	FBgn0033688	Prp8	97	91.793	Drosophila_melanogaster
ENSPMEG00000004051	prpf8	100	91.649	ENSETEG00000017592	PRPF8	100	91.649	Echinops_telfairi
ENSPMEG00000004051	prpf8	99	93.433	ENSEBUG00000006548	prpf8	99	93.433	Eptatretus_burgeri
ENSPMEG00000004051	prpf8	100	96.990	ENSEASG00005009514	PRPF8	99	98.486	Equus_asinus_asinus
ENSPMEG00000004051	prpf8	98	96.747	ENSECAG00000021318	PRPF8	100	98.198	Equus_caballus
ENSPMEG00000004051	prpf8	67	98.519	ENSEEUG00000012120	-	67	98.519	Erinaceus_europaeus
ENSPMEG00000004051	prpf8	98	96.750	ENSELUG00000007120	prpf8	99	96.794	Esox_lucius
ENSPMEG00000004051	prpf8	100	96.990	ENSFCAG00000006297	PRPF8	100	96.990	Felis_catus
ENSPMEG00000004051	prpf8	100	97.031	ENSFALG00000006628	PRPF8	100	97.031	Ficedula_albicollis
ENSPMEG00000004051	prpf8	100	96.990	ENSFDAG00000004711	PRPF8	100	96.990	Fukomys_damarensis
ENSPMEG00000004051	prpf8	100	98.558	ENSFHEG00000021084	prpf8	100	98.601	Fundulus_heteroclitus
ENSPMEG00000004051	prpf8	100	95.763	ENSGMOG00000002028	prpf8	99	95.763	Gadus_morhua
ENSPMEG00000004051	prpf8	100	97.031	ENSGALG00000002943	PRPF8	100	97.031	Gallus_gallus
ENSPMEG00000004051	prpf8	99	99.702	ENSGAFG00000010337	prpf8	100	99.702	Gambusia_affinis
ENSPMEG00000004051	prpf8	100	98.176	ENSGACG00000008504	prpf8	100	98.378	Gasterosteus_aculeatus
ENSPMEG00000004051	prpf8	100	96.989	ENSGAGG00000008350	PRPF8	100	96.989	Gopherus_agassizii
ENSPMEG00000004051	prpf8	100	96.990	ENSGGOG00000005516	PRPF8	100	96.990	Gorilla_gorilla
ENSPMEG00000004051	prpf8	100	97.964	ENSHBUG00000016192	prpf8	100	97.964	Haplochromis_burtoni
ENSPMEG00000004051	prpf8	100	96.990	ENSHGLG00000012029	PRPF8	100	96.990	Heterocephalus_glaber_female
ENSPMEG00000004051	prpf8	100	96.990	ENSHGLG00100016494	PRPF8	100	96.990	Heterocephalus_glaber_male
ENSPMEG00000004051	prpf8	100	98.049	ENSHCOG00000016414	prpf8	100	98.049	Hippocampus_comes
ENSPMEG00000004051	prpf8	100	97.837	ENSIPUG00000023230	prpf8	100	97.880	Ictalurus_punctatus
ENSPMEG00000004051	prpf8	100	96.990	ENSSTOG00000005128	PRPF8	100	96.990	Ictidomys_tridecemlineatus
ENSPMEG00000004051	prpf8	100	94.871	ENSJJAG00000021159	Prpf8	100	94.871	Jaculus_jaculus
ENSPMEG00000004051	prpf8	99	99.061	ENSKMAG00000016118	prpf8	100	99.061	Kryptolebias_marmoratus
ENSPMEG00000004051	prpf8	100	98.092	ENSLBEG00000026903	prpf8	100	98.134	Labrus_bergylta
ENSPMEG00000004051	prpf8	95	94.817	ENSLACG00000010479	PRPF8	99	98.357	Latimeria_chalumnae
ENSPMEG00000004051	prpf8	99	97.541	ENSLOCG00000005409	prpf8	99	97.541	Lepisosteus_oculatus
ENSPMEG00000004051	prpf8	100	96.990	ENSLAFG00000015445	PRPF8	100	96.990	Loxodonta_africana
ENSPMEG00000004051	prpf8	100	96.990	ENSMFAG00000039995	PRPF8	100	96.990	Macaca_fascicularis
ENSPMEG00000004051	prpf8	100	96.990	ENSMMUG00000004820	PRPF8	100	96.990	Macaca_mulatta
ENSPMEG00000004051	prpf8	100	96.990	ENSMNEG00000035713	PRPF8	100	96.990	Macaca_nemestrina
ENSPMEG00000004051	prpf8	100	96.990	ENSMLEG00000037937	PRPF8	100	96.990	Mandrillus_leucophaeus
ENSPMEG00000004051	prpf8	100	98.346	ENSMAMG00000008919	prpf8	100	98.388	Mastacembelus_armatus
ENSPMEG00000004051	prpf8	100	98.643	ENSMZEG00005015073	prpf8	100	98.643	Maylandia_zebra
ENSPMEG00000004051	prpf8	100	97.031	ENSMGAG00000004769	PRPF8	100	97.031	Meleagris_gallopavo
ENSPMEG00000004051	prpf8	100	96.990	ENSMICG00000010320	PRPF8	100	96.990	Microcebus_murinus
ENSPMEG00000004051	prpf8	100	96.990	ENSMOCG00000016838	Prpf8	100	96.990	Microtus_ochrogaster
ENSPMEG00000004051	prpf8	100	97.795	ENSMMOG00000011887	prpf8	100	97.837	Mola_mola
ENSPMEG00000004051	prpf8	100	96.905	ENSMODG00000010480	PRPF8	100	96.905	Monodelphis_domestica
ENSPMEG00000004051	prpf8	97	98.536	ENSMALG00000003558	prpf8	100	98.536	Monopterus_albus
ENSPMEG00000004051	prpf8	100	96.948	MGP_CAROLIEiJ_G0016740	Prpf8	100	96.948	Mus_caroli
ENSPMEG00000004051	prpf8	100	96.948	ENSMUSG00000020850	Prpf8	100	96.948	Mus_musculus
ENSPMEG00000004051	prpf8	100	96.905	MGP_PahariEiJ_G0017877	Prpf8	100	96.905	Mus_pahari
ENSPMEG00000004051	prpf8	100	96.948	MGP_SPRETEiJ_G0017583	Prpf8	100	96.948	Mus_spretus
ENSPMEG00000004051	prpf8	100	96.990	ENSMPUG00000013227	PRPF8	100	96.990	Mustela_putorius_furo
ENSPMEG00000004051	prpf8	100	96.867	ENSMLUG00000002666	PRPF8	100	96.867	Myotis_lucifugus
ENSPMEG00000004051	prpf8	100	95.252	ENSNGAG00000005305	Prpf8	100	95.252	Nannospalax_galili
ENSPMEG00000004051	prpf8	100	98.685	ENSNBRG00000013127	prpf8	100	98.685	Neolamprologus_brichardi
ENSPMEG00000004051	prpf8	97	96.756	ENSNLEG00000000897	PRPF8	98	96.756	Nomascus_leucogenys
ENSPMEG00000004051	prpf8	98	96.306	ENSMEUG00000015999	PRPF8	100	96.306	Notamacropus_eugenii
ENSPMEG00000004051	prpf8	100	95.507	ENSOPRG00000003102	PRPF8	99	96.714	Ochotona_princeps
ENSPMEG00000004051	prpf8	100	96.990	ENSODEG00000008468	PRPF8	100	96.990	Octodon_degus
ENSPMEG00000004051	prpf8	100	98.685	ENSONIG00000008153	prpf8	100	98.685	Oreochromis_niloticus
ENSPMEG00000004051	prpf8	82	99.065	ENSOANG00000004250	PRPF8	97	99.065	Ornithorhynchus_anatinus
ENSPMEG00000004051	prpf8	100	96.990	ENSOCUG00000000081	PRPF8	100	96.990	Oryctolagus_cuniculus
ENSPMEG00000004051	prpf8	100	98.813	ENSORLG00000008036	prpf8	100	98.813	Oryzias_latipes
ENSPMEG00000004051	prpf8	100	98.771	ENSORLG00020021070	prpf8	100	98.771	Oryzias_latipes_hni
ENSPMEG00000004051	prpf8	100	98.855	ENSORLG00015002340	prpf8	100	98.855	Oryzias_latipes_hsok
ENSPMEG00000004051	prpf8	100	97.243	ENSOMEG00000016866	prpf8	100	97.243	Oryzias_melastigma
ENSPMEG00000004051	prpf8	100	96.867	ENSOARG00000013312	PRPF8	100	96.867	Ovis_aries
ENSPMEG00000004051	prpf8	100	96.990	ENSPPAG00000042753	PRPF8	100	96.990	Pan_paniscus
ENSPMEG00000004051	prpf8	100	96.990	ENSPPRG00000008746	PRPF8	100	96.990	Panthera_pardus
ENSPMEG00000004051	prpf8	100	96.905	ENSPTIG00000019200	PRPF8	100	96.905	Panthera_tigris_altaica
ENSPMEG00000004051	prpf8	100	96.990	ENSPTRG00000039576	PRPF8	100	96.990	Pan_troglodytes
ENSPMEG00000004051	prpf8	98	98.219	ENSPANG00000024607	PRPF8	98	98.219	Papio_anubis
ENSPMEG00000004051	prpf8	100	98.092	ENSPKIG00000011201	prpf8	100	98.092	Paramormyrops_kingsleyae
ENSPMEG00000004051	prpf8	100	96.904	ENSPSIG00000013393	PRPF8	100	96.904	Pelodiscus_sinensis
ENSPMEG00000004051	prpf8	100	96.990	ENSPEMG00000021699	Prpf8	100	96.990	Peromyscus_maniculatus_bairdii
ENSPMEG00000004051	prpf8	95	93.764	ENSPMAG00000005438	prpf8	100	93.808	Petromyzon_marinus
ENSPMEG00000004051	prpf8	100	96.905	ENSPCIG00000022603	PRPF8	100	98.081	Phascolarctos_cinereus
ENSPMEG00000004051	prpf8	100	100.000	ENSPFOG00000007005	prpf8	100	100.000	Poecilia_formosa
ENSPMEG00000004051	prpf8	100	100.000	ENSPLAG00000020777	prpf8	100	100.000	Poecilia_latipinna
ENSPMEG00000004051	prpf8	100	99.788	ENSPREG00000021902	prpf8	100	99.788	Poecilia_reticulata
ENSPMEG00000004051	prpf8	100	96.990	ENSPPYG00000007777	PRPF8	100	96.990	Pongo_abelii
ENSPMEG00000004051	prpf8	90	96.287	ENSPCAG00000008938	PRPF8	90	96.287	Procavia_capensis
ENSPMEG00000004051	prpf8	100	96.990	ENSPCOG00000015182	PRPF8	100	96.990	Propithecus_coquereli
ENSPMEG00000004051	prpf8	93	98.614	ENSPVAG00000002134	PRPF8	93	98.614	Pteropus_vampyrus
ENSPMEG00000004051	prpf8	100	97.964	ENSPNYG00000016356	prpf8	100	97.964	Pundamilia_nyererei
ENSPMEG00000004051	prpf8	100	97.964	ENSPNAG00000009247	prpf8	100	98.007	Pygocentrus_nattereri
ENSPMEG00000004051	prpf8	100	96.948	ENSRNOG00000003495	Prpf8	100	96.948	Rattus_norvegicus
ENSPMEG00000004051	prpf8	100	96.990	ENSRBIG00000031219	PRPF8	100	97.724	Rhinopithecus_bieti
ENSPMEG00000004051	prpf8	100	96.990	ENSRROG00000038014	PRPF8	100	97.724	Rhinopithecus_roxellana
ENSPMEG00000004051	prpf8	98	62.516	YHR165C	PRP8	95	62.559	Saccharomyces_cerevisiae
ENSPMEG00000004051	prpf8	100	96.990	ENSSBOG00000029717	PRPF8	100	96.990	Saimiri_boliviensis_boliviensis
ENSPMEG00000004051	prpf8	100	96.863	ENSSHAG00000006167	PRPF8	100	96.863	Sarcophilus_harrisii
ENSPMEG00000004051	prpf8	100	98.049	ENSSFOG00015013905	prpf8	100	98.049	Scleropages_formosus
ENSPMEG00000004051	prpf8	100	97.964	ENSSMAG00000017736	prpf8	100	97.964	Scophthalmus_maximus
ENSPMEG00000004051	prpf8	100	98.304	ENSSDUG00000003029	prpf8	100	98.346	Seriola_dumerili
ENSPMEG00000004051	prpf8	69	99.687	ENSSLDG00000017096	prpf8	100	99.687	Seriola_lalandi_dorsalis
ENSPMEG00000004051	prpf8	87	94.336	ENSSARG00000002892	PRPF8	87	94.336	Sorex_araneus
ENSPMEG00000004051	prpf8	100	96.862	ENSSPUG00000007463	PRPF8	100	96.862	Sphenodon_punctatus
ENSPMEG00000004051	prpf8	100	97.795	ENSSPAG00000015639	prpf8	100	97.837	Stegastes_partitus
ENSPMEG00000004051	prpf8	100	96.990	ENSSSCG00000017817	PRPF8	100	96.990	Sus_scrofa
ENSPMEG00000004051	prpf8	51	98.604	ENSTGUG00000015597	-	95	98.604	Taeniopygia_guttata
ENSPMEG00000004051	prpf8	100	97.031	ENSTGUG00000005648	-	100	97.031	Taeniopygia_guttata
ENSPMEG00000004051	prpf8	100	97.752	ENSTRUG00000015906	prpf8	100	97.795	Takifugu_rubripes
ENSPMEG00000004051	prpf8	95	99.343	ENSTNIG00000003460	prpf8	99	99.343	Tetraodon_nigroviridis
ENSPMEG00000004051	prpf8	93	96.732	ENSTBEG00000006431	PRPF8	93	96.732	Tupaia_belangeri
ENSPMEG00000004051	prpf8	100	96.397	ENSTTRG00000006869	PRPF8	100	96.397	Tursiops_truncatus
ENSPMEG00000004051	prpf8	54	95.401	ENSUAMG00000015644	-	96	95.401	Ursus_americanus
ENSPMEG00000004051	prpf8	100	96.736	ENSUMAG00000009385	PRPF8	100	96.736	Ursus_maritimus
ENSPMEG00000004051	prpf8	71	97.931	ENSVPAG00000006063	-	71	97.561	Vicugna_pacos
ENSPMEG00000004051	prpf8	100	96.403	ENSVVUG00000021695	PRPF8	99	96.990	Vulpes_vulpes
ENSPMEG00000004051	prpf8	100	96.694	ENSXETG00000022259	prpf8	100	96.694	Xenopus_tropicalis
ENSPMEG00000004051	prpf8	100	99.109	ENSXCOG00000012775	prpf8	100	99.152	Xiphophorus_couchianus
ENSPMEG00000004051	prpf8	100	99.067	ENSXMAG00000008505	prpf8	100	99.109	Xiphophorus_maculatus