EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSPMEG00000004131 (Gene tree)
Gene ID: -
Gene Symbol: -
Alias: -
Full Name: -
Gene Type: protein_coding
Species: Poecilia_mexicana
Status: putative
Strand: Plus strand
Length: 5284 bases
Position: chrKQ552059.1:149093-154376
Accession: -
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSPMEP00000022904	zf-met	PF12874.7	9.7e-23	1	3
ENSPMEP00000022904	zf-met	PF12874.7	9.7e-23	2	3
ENSPMEP00000022904	zf-met	PF12874.7	9.7e-23	3	3
ENSPMEP00000022913	zf-met	PF12874.7	3e-09	1	1
ENSPMEP00000022904	zf-C2H2_jaz	PF12171.8	2.5e-20	1	3
ENSPMEP00000022904	zf-C2H2_jaz	PF12171.8	2.5e-20	2	3
ENSPMEP00000022904	zf-C2H2_jaz	PF12171.8	2.5e-20	3	3
ENSPMEP00000022913	zf-C2H2_jaz	PF12171.8	6.4e-07	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSPMET00000011539	-	789	-	ENSPMEP00000022904	262 (aa)	-	-
ENSPMET00000011512	-	1083	-	ENSPMEP00000022913	326 (aa)	-	-

Gene Model

Click here to download ENSPMEG00000004131's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSPMEG00000004131's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSPMEG00000004131	-	76	34.884	ENSPMEG00000007870	zmat4a	70	34.884

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSPMEG00000004131	-	91	62.082	ENSG00000172667	ZMAT3	97	68.966	Homo_sapiens
ENSPMEG00000004131	-	100	76.923	ENSAPOG00000015037	zmat3	98	76.557	Acanthochromis_polyacanthus
ENSPMEG00000004131	-	99	57.432	ENSAMEG00000010742	ZMAT3	99	56.757	Ailuropoda_melanoleuca
ENSPMEG00000004131	-	98	77.656	ENSACIG00000023037	zmat3	91	76.923	Amphilophus_citrinellus
ENSPMEG00000004131	-	100	79.211	ENSAOCG00000017955	zmat3	94	79.211	Amphiprion_ocellaris
ENSPMEG00000004131	-	96	76.493	ENSAPEG00000014553	zmat3	88	82.008	Amphiprion_percula
ENSPMEG00000004131	-	97	72.263	ENSATEG00000022244	zmat3	98	72.263	Anabas_testudineus
ENSPMEG00000004131	-	90	61.217	ENSAPLG00000013292	ZMAT3	96	56.944	Anas_platyrhynchos
ENSPMEG00000004131	-	91	60.595	ENSACAG00000005005	ZMAT3	99	58.703	Anolis_carolinensis
ENSPMEG00000004131	-	93	56.159	ENSANAG00000035673	ZMAT3	96	55.357	Aotus_nancymaae
ENSPMEG00000004131	-	100	79.412	ENSACLG00000026272	zmat3	94	72.982	Astatotilapia_calliptera
ENSPMEG00000004131	-	96	59.344	ENSAMXG00000009798	zmat3	83	57.705	Astyanax_mexicanus
ENSPMEG00000004131	-	91	58.824	ENSBTAG00000012463	ZMAT3	99	58.108	Bos_taurus
ENSPMEG00000004131	-	95	59.075	ENSCJAG00000013399	ZMAT3	97	57.840	Callithrix_jacchus
ENSPMEG00000004131	-	99	58.446	ENSCAFG00000011081	ZMAT3	99	59.122	Canis_familiaris
ENSPMEG00000004131	-	99	58.446	ENSCAFG00020023107	ZMAT3	99	59.122	Canis_lupus_dingo
ENSPMEG00000004131	-	91	60.370	ENSCHIG00000025074	ZMAT3	99	57.823	Capra_hircus
ENSPMEG00000004131	-	99	59.247	ENSTSYG00000026546	ZMAT3	99	58.446	Carlito_syrichta
ENSPMEG00000004131	-	99	60.751	ENSCAPG00000014645	ZMAT3	99	59.933	Cavia_aperea
ENSPMEG00000004131	-	99	60.751	ENSCPOG00000003865	ZMAT3	99	59.933	Cavia_porcellus
ENSPMEG00000004131	-	95	59.286	ENSCCAG00000036721	ZMAT3	97	57.692	Cebus_capucinus
ENSPMEG00000004131	-	98	56.679	ENSCATG00000025137	ZMAT3	98	56.679	Cercocebus_atys
ENSPMEG00000004131	-	99	60.751	ENSCLAG00000013464	ZMAT3	99	59.596	Chinchilla_lanigera
ENSPMEG00000004131	-	90	60.741	ENSCSAG00000012935	ZMAT3	99	58.305	Chlorocebus_sabaeus
ENSPMEG00000004131	-	91	61.255	ENSCHOG00000005591	ZMAT3	97	59.155	Choloepus_hoffmanni
ENSPMEG00000004131	-	99	57.534	ENSCPBG00000026917	ZMAT3	99	56.849	Chrysemys_picta_bellii
ENSPMEG00000004131	-	91	58.456	ENSCANG00000029476	ZMAT3	98	56.357	Colobus_angolensis_palliatus
ENSPMEG00000004131	-	99	56.803	ENSCGRG00001012339	Zmat3	80	63.675	Cricetulus_griseus_chok1gshd
ENSPMEG00000004131	-	99	56.803	ENSCGRG00000011491	Zmat3	80	63.675	Cricetulus_griseus_crigri
ENSPMEG00000004131	-	100	64.145	ENSCSEG00000019463	zmat3	89	65.292	Cynoglossus_semilaevis
ENSPMEG00000004131	-	100	87.179	ENSCVAG00000011847	zmat3	100	80.496	Cyprinodon_variegatus
ENSPMEG00000004131	-	96	58.528	ENSDARG00000080021	zmat3	88	58.562	Danio_rerio
ENSPMEG00000004131	-	91	59.559	ENSDNOG00000012284	ZMAT3	99	59.122	Dasypus_novemcinctus
ENSPMEG00000004131	-	91	60.886	ENSDORG00000011801	Zmat3	99	59.661	Dipodomys_ordii
ENSPMEG00000004131	-	79	52.966	ENSETEG00000008883	ZMAT3	100	52.966	Echinops_telfairi
ENSPMEG00000004131	-	79	65.948	ENSEASG00005016887	ZMAT3	99	58.644	Equus_asinus_asinus
ENSPMEG00000004131	-	79	65.517	ENSECAG00000012784	ZMAT3	99	57.627	Equus_caballus
ENSPMEG00000004131	-	99	52.525	ENSEEUG00000001126	ZMAT3	99	52.365	Erinaceus_europaeus
ENSPMEG00000004131	-	86	65.637	ENSELUG00000010132	zmat3	67	66.667	Esox_lucius
ENSPMEG00000004131	-	99	58.983	ENSFCAG00000014578	ZMAT3	99	58.644	Felis_catus
ENSPMEG00000004131	-	95	58.273	ENSFALG00000008403	ZMAT3	80	64.502	Ficedula_albicollis
ENSPMEG00000004131	-	99	58.503	ENSFDAG00000013376	ZMAT3	99	57.383	Fukomys_damarensis
ENSPMEG00000004131	-	100	77.778	ENSFHEG00000003221	zmat3	100	77.083	Fundulus_heteroclitus
ENSPMEG00000004131	-	82	71.074	ENSGMOG00000008558	zmat3	100	71.074	Gadus_morhua
ENSPMEG00000004131	-	95	58.273	ENSGALG00000040948	ZMAT3	93	63.333	Gallus_gallus
ENSPMEG00000004131	-	72	93.496	ENSGAFG00000010485	zmat3	50	93.496	Gambusia_affinis
ENSPMEG00000004131	-	89	72.973	ENSGACG00000006175	zmat3	95	74.699	Gasterosteus_aculeatus
ENSPMEG00000004131	-	99	57.877	ENSGAGG00000009275	ZMAT3	99	57.877	Gopherus_agassizii
ENSPMEG00000004131	-	91	62.082	ENSGGOG00000009975	ZMAT3	98	60.279	Gorilla_gorilla
ENSPMEG00000004131	-	100	79.061	ENSHBUG00000004401	zmat3	100	78.700	Haplochromis_burtoni
ENSPMEG00000004131	-	99	60.068	ENSHGLG00000011523	ZMAT3	99	59.386	Heterocephalus_glaber_female
ENSPMEG00000004131	-	99	60.068	ENSHGLG00100012235	ZMAT3	99	59.386	Heterocephalus_glaber_male
ENSPMEG00000004131	-	96	72.727	ENSHCOG00000010624	zmat3	83	72.348	Hippocampus_comes
ENSPMEG00000004131	-	88	62.264	ENSIPUG00000003043	zmat3	89	65.432	Ictalurus_punctatus
ENSPMEG00000004131	-	91	60.517	ENSSTOG00000028436	ZMAT3	99	58.305	Ictidomys_tridecemlineatus
ENSPMEG00000004131	-	76	68.000	ENSJJAG00000004288	Zmat3	78	68.000	Jaculus_jaculus
ENSPMEG00000004131	-	100	82.051	ENSKMAG00000008962	zmat3	88	81.545	Kryptolebias_marmoratus
ENSPMEG00000004131	-	100	73.883	ENSLBEG00000001993	zmat3	100	72.852	Labrus_bergylta
ENSPMEG00000004131	-	99	50.158	ENSLACG00000015780	ZMAT3	87	50.476	Latimeria_chalumnae
ENSPMEG00000004131	-	83	64.567	ENSLOCG00000001108	zmat3	68	64.567	Lepisosteus_oculatus
ENSPMEG00000004131	-	91	60.370	ENSLAFG00000000897	ZMAT3	99	58.966	Loxodonta_africana
ENSPMEG00000004131	-	90	61.940	ENSMFAG00000021292	ZMAT3	99	59.386	Macaca_fascicularis
ENSPMEG00000004131	-	90	59.851	ENSMMUG00000003216	ZMAT3	99	57.483	Macaca_mulatta
ENSPMEG00000004131	-	90	58.755	ENSMNEG00000036725	ZMAT3	99	56.419	Macaca_nemestrina
ENSPMEG00000004131	-	98	59.722	ENSMLEG00000026279	ZMAT3	98	59.722	Mandrillus_leucophaeus
ENSPMEG00000004131	-	100	81.579	ENSMAMG00000012349	zmat3	94	74.021	Mastacembelus_armatus
ENSPMEG00000004131	-	100	76.471	ENSMZEG00005015427	zmat3	94	75.088	Maylandia_zebra
ENSPMEG00000004131	-	95	58.273	ENSMGAG00000009873	ZMAT3	83	62.810	Meleagris_gallopavo
ENSPMEG00000004131	-	99	56.463	ENSMAUG00000001986	Zmat3	78	63.877	Mesocricetus_auratus
ENSPMEG00000004131	-	99	60.410	ENSMICG00000049501	ZMAT3	99	58.644	Microcebus_murinus
ENSPMEG00000004131	-	99	57.388	ENSMOCG00000018844	Zmat3	78	65.789	Microtus_ochrogaster
ENSPMEG00000004131	-	100	66.134	ENSMMOG00000001603	zmat3	100	66.773	Mola_mola
ENSPMEG00000004131	-	93	55.351	ENSMODG00000021308	ZMAT3	94	53.310	Monodelphis_domestica
ENSPMEG00000004131	-	100	76.923	ENSMALG00000019683	zmat3	95	70.849	Monopterus_albus
ENSPMEG00000004131	-	95	57.194	MGP_CAROLIEiJ_G0024914	Zmat3	78	64.474	Mus_caroli
ENSPMEG00000004131	-	95	57.194	ENSMUSG00000027663	Zmat3	78	64.474	Mus_musculus
ENSPMEG00000004131	-	95	56.786	MGP_PahariEiJ_G0026359	Zmat3	78	63.913	Mus_pahari
ENSPMEG00000004131	-	95	57.194	MGP_SPRETEiJ_G0025848	Zmat3	78	64.474	Mus_spretus
ENSPMEG00000004131	-	99	58.586	ENSMPUG00000017206	ZMAT3	80	67.241	Mustela_putorius_furo
ENSPMEG00000004131	-	99	56.566	ENSMLUG00000013074	ZMAT3	99	55.892	Myotis_lucifugus
ENSPMEG00000004131	-	76	67.257	ENSNGAG00000023602	Zmat3	99	56.803	Nannospalax_galili
ENSPMEG00000004131	-	100	79.061	ENSNBRG00000020886	zmat3	100	78.700	Neolamprologus_brichardi
ENSPMEG00000004131	-	91	59.630	ENSNLEG00000005658	ZMAT3	98	57.439	Nomascus_leucogenys
ENSPMEG00000004131	-	97	56.140	ENSMEUG00000015724	ZMAT3	89	56.679	Notamacropus_eugenii
ENSPMEG00000004131	-	99	59.386	ENSODEG00000003313	ZMAT3	99	59.386	Octodon_degus
ENSPMEG00000004131	-	99	72.054	ENSONIG00000008388	zmat3	99	71.622	Oreochromis_niloticus
ENSPMEG00000004131	-	61	56.180	ENSOANG00000009901	ZMAT3	65	54.696	Ornithorhynchus_anatinus
ENSPMEG00000004131	-	91	59.851	ENSOCUG00000004658	ZMAT3	99	58.362	Oryctolagus_cuniculus
ENSPMEG00000004131	-	100	71.053	ENSORLG00000011575	zmat3	64	69.310	Oryzias_latipes
ENSPMEG00000004131	-	100	60.597	ENSORLG00020005858	zmat3	64	68.621	Oryzias_latipes_hni
ENSPMEG00000004131	-	99	73.725	ENSORLG00015003707	zmat3	64	68.966	Oryzias_latipes_hsok
ENSPMEG00000004131	-	100	66.667	ENSOMEG00000011303	zmat3	77	80.000	Oryzias_melastigma
ENSPMEG00000004131	-	91	60.000	ENSOGAG00000003252	ZMAT3	99	57.095	Otolemur_garnettii
ENSPMEG00000004131	-	91	59.191	ENSOARG00000020713	ZMAT3	99	57.095	Ovis_aries
ENSPMEG00000004131	-	91	62.082	ENSPPAG00000035483	ZMAT3	98	60.279	Pan_paniscus
ENSPMEG00000004131	-	99	58.784	ENSPPRG00000004407	ZMAT3	99	58.108	Panthera_pardus
ENSPMEG00000004131	-	99	58.784	ENSPTIG00000009929	ZMAT3	99	58.108	Panthera_tigris_altaica
ENSPMEG00000004131	-	91	60.000	ENSPTRG00000015641	ZMAT3	98	58.333	Pan_troglodytes
ENSPMEG00000004131	-	98	60.000	ENSPANG00000023167	ZMAT3	98	60.000	Papio_anubis
ENSPMEG00000004131	-	96	60.606	ENSPKIG00000023370	zmat3	83	59.596	Paramormyrops_kingsleyae
ENSPMEG00000004131	-	99	56.164	ENSPSIG00000014839	ZMAT3	92	56.272	Pelodiscus_sinensis
ENSPMEG00000004131	-	96	66.296	ENSPMGG00000023924	zmat3	90	71.186	Periophthalmus_magnuspinnatus
ENSPMEG00000004131	-	99	57.627	ENSPEMG00000019154	Zmat3	78	65.351	Peromyscus_maniculatus_bairdii
ENSPMEG00000004131	-	94	76.786	ENSPFOG00000019206	zmat3	51	97.006	Poecilia_formosa
ENSPMEG00000004131	-	100	84.397	ENSPLAG00000022572	zmat3	100	84.397	Poecilia_latipinna
ENSPMEG00000004131	-	100	92.308	ENSPREG00000022632	zmat3	100	82.270	Poecilia_reticulata
ENSPMEG00000004131	-	91	60.000	ENSPPYG00000014315	ZMAT3	98	58.333	Pongo_abelii
ENSPMEG00000004131	-	89	60.448	ENSPCAG00000008585	ZMAT3	79	65.789	Procavia_capensis
ENSPMEG00000004131	-	99	60.068	ENSPCOG00000022835	ZMAT3	99	58.983	Propithecus_coquereli
ENSPMEG00000004131	-	95	59.786	ENSPVAG00000004489	ZMAT3	80	66.094	Pteropus_vampyrus
ENSPMEG00000004131	-	100	79.061	ENSPNYG00000014350	zmat3	100	78.700	Pundamilia_nyererei
ENSPMEG00000004131	-	96	60.328	ENSPNAG00000015664	zmat3	83	59.016	Pygocentrus_nattereri
ENSPMEG00000004131	-	95	58.333	ENSRNOG00000010119	Zmat3	78	65.487	Rattus_norvegicus
ENSPMEG00000004131	-	91	60.517	ENSRBIG00000029622	ZMAT3	96	58.511	Rhinopithecus_bieti
ENSPMEG00000004131	-	91	59.191	ENSRROG00000038345	ZMAT3	96	57.951	Rhinopithecus_roxellana
ENSPMEG00000004131	-	91	60.967	ENSSBOG00000033332	ZMAT3	97	59.091	Saimiri_boliviensis_boliviensis
ENSPMEG00000004131	-	99	56.463	ENSSHAG00000016154	ZMAT3	89	57.040	Sarcophilus_harrisii
ENSPMEG00000004131	-	96	63.415	ENSSFOG00015006984	zmat3	100	62.718	Scleropages_formosus
ENSPMEG00000004131	-	100	76.923	ENSSMAG00000019540	-	70	71.233	Scophthalmus_maximus
ENSPMEG00000004131	-	100	64.350	ENSSDUG00000016188	zmat3	100	63.746	Seriola_dumerili
ENSPMEG00000004131	-	100	82.051	ENSSLDG00000018611	zmat3	100	63.746	Seriola_lalandi_dorsalis
ENSPMEG00000004131	-	69	53.769	ENSSARG00000004901	ZMAT3	96	52.466	Sorex_araneus
ENSPMEG00000004131	-	78	63.203	ENSSPUG00000014753	ZMAT3	99	56.446	Sphenodon_punctatus
ENSPMEG00000004131	-	97	75.926	ENSSPAG00000011062	zmat3	77	81.172	Stegastes_partitus
ENSPMEG00000004131	-	99	58.703	ENSSSCG00000033860	ZMAT3	99	58.703	Sus_scrofa
ENSPMEG00000004131	-	95	58.273	ENSTGUG00000010765	-	80	64.502	Taeniopygia_guttata
ENSPMEG00000004131	-	81	80.258	ENSTRUG00000004788	zmat3	87	78.838	Takifugu_rubripes
ENSPMEG00000004131	-	85	76.587	ENSTNIG00000006781	zmat3	89	76.190	Tetraodon_nigroviridis
ENSPMEG00000004131	-	51	67.333	ENSTBEG00000012359	ZMAT3	94	67.333	Tupaia_belangeri
ENSPMEG00000004131	-	91	56.767	ENSTTRG00000004923	ZMAT3	99	55.517	Tursiops_truncatus
ENSPMEG00000004131	-	99	58.108	ENSUAMG00000007623	ZMAT3	99	57.432	Ursus_americanus
ENSPMEG00000004131	-	99	58.644	ENSUMAG00000007847	ZMAT3	99	57.966	Ursus_maritimus
ENSPMEG00000004131	-	79	64.378	ENSVPAG00000006611	ZMAT3	99	57.095	Vicugna_pacos
ENSPMEG00000004131	-	99	58.108	ENSVVUG00000004729	ZMAT3	99	58.784	Vulpes_vulpes
ENSPMEG00000004131	-	92	56.818	ENSXETG00000007251	zmat3	82	60.082	Xenopus_tropicalis
ENSPMEG00000004131	-	100	78.947	ENSXCOG00000008397	zmat3	100	77.305	Xiphophorus_couchianus
ENSPMEG00000004131	-	87	90.780	ENSXMAG00000015188	zmat3	70	90.780	Xiphophorus_maculatus