EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSPMEG00000004165 (Gene tree)
Gene ID: 106930291
Gene Symbol: -
Alias: -
Full Name: gastrula zinc finger protein XlCGF53.1-like
Gene Type: protein_coding
Species: Poecilia_mexicana
Status: putative
Strand: Minus strand
Length: 4562 bases
Position: chrKQ552205.1:21-4582
Accession: 106930291
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSPMEP00000003084	zf-C2H2	PF00096.26	1.2e-16	1	3
ENSPMEP00000003084	zf-C2H2	PF00096.26	1.2e-16	2	3
ENSPMEP00000003084	zf-C2H2	PF00096.26	1.2e-16	3	3
ENSPMEP00000003084	zf-met	PF12874.7	1.7e-06	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSPMET00000011449	-	3412	XM_015007738	ENSPMEP00000003084	572 (aa)	XP_014863224	UPI00072E9231

Gene Model

Click here to download ENSPMEG00000004165's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSPMEG00000004165's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSPMEG00000004165	-	60	59.701	ENSELUG00000012496	si:ch73-109d9.3	99	33.165	Esox_lucius
ENSPMEG00000004165	-	100	70.121	ENSFHEG00000013986	-	100	70.121	Fundulus_heteroclitus
ENSPMEG00000004165	-	100	90.385	ENSGAFG00000014437	-	100	90.385	Gambusia_affinis
ENSPMEG00000004165	-	100	92.308	ENSPREG00000001090	-	100	92.308	Poecilia_reticulata
ENSPMEG00000004165	-	63	91.944	ENSXMAG00000025564	-	100	91.944	Xiphophorus_maculatus