EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSPMEG00000004292 (Gene tree)
Gene ID: 106906384
Gene Symbol: rbm28
Alias: -
Full Name: RNA binding motif protein 28
Gene Type: protein_coding
Species: Poecilia_mexicana
Status: putative
Strand: Plus strand
Length: 11466 bases
Position: chrKQ551058.1:597227-608692
Accession: 106906384
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSPMEP00000003195	RRM_1	PF00076.22	1e-59	1	3
ENSPMEP00000003195	RRM_1	PF00076.22	1e-59	2	3
ENSPMEP00000003195	RRM_1	PF00076.22	1e-59	3	3
ENSPMEP00000023014	RRM_1	PF00076.22	1.5e-59	1	3
ENSPMEP00000023014	RRM_1	PF00076.22	1.5e-59	2	3
ENSPMEP00000023014	RRM_1	PF00076.22	1.5e-59	3	3

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSPMET00000011254	-	5290	-	ENSPMEP00000003195	722 (aa)	-	-
ENSPMET00000011261	-	4831	XM_014971644	ENSPMEP00000023014	763 (aa)	XP_014827130	UPI00072E1111

Gene Model

Click here to download ENSPMEG00000004292's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSPMEG00000004292's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSPMEG00000004292	rbm28	100	49.114	ENSG00000106344	RBM28	100	46.829	Homo_sapiens
ENSPMEG00000004292	rbm28	57	73.016	ENSAPOG00000015512	rbm28	59	72.788	Acanthochromis_polyacanthus
ENSPMEG00000004292	rbm28	97	58.242	ENSAMEG00000004776	RBM28	66	58.974	Ailuropoda_melanoleuca
ENSPMEG00000004292	rbm28	56	70.423	ENSACIG00000023153	rbm28	91	70.561	Amphilophus_citrinellus
ENSPMEG00000004292	rbm28	57	73.016	ENSAOCG00000000462	rbm28	100	66.623	Amphiprion_ocellaris
ENSPMEG00000004292	rbm28	57	72.789	ENSAPEG00000012996	rbm28	100	66.320	Amphiprion_percula
ENSPMEG00000004292	rbm28	59	65.000	ENSATEG00000001672	rbm28	61	65.000	Anabas_testudineus
ENSPMEG00000004292	rbm28	90	65.000	ENSANAG00000033922	RBM28	81	65.000	Aotus_nancymaae
ENSPMEG00000004292	rbm28	100	64.036	ENSACLG00000025024	rbm28	59	72.848	Astatotilapia_calliptera
ENSPMEG00000004292	rbm28	58	61.798	ENSAMXG00000000763	rbm28	99	61.798	Astyanax_mexicanus
ENSPMEG00000004292	rbm28	100	50.781	ENSBTAG00000017001	RBM28	81	65.000	Bos_taurus
ENSPMEG00000004292	rbm28	100	51.097	ENSCJAG00000017731	RBM28	80	65.000	Callithrix_jacchus
ENSPMEG00000004292	rbm28	100	48.237	ENSCAFG00000001667	RBM28	58	55.778	Canis_familiaris
ENSPMEG00000004292	rbm28	100	48.237	ENSCAFG00020021648	RBM28	58	55.778	Canis_lupus_dingo
ENSPMEG00000004292	rbm28	62	54.697	ENSCHIG00000014146	RBM28	59	55.629	Capra_hircus
ENSPMEG00000004292	rbm28	66	62.500	ENSTSYG00000002892	RBM28	78	62.500	Carlito_syrichta
ENSPMEG00000004292	rbm28	87	39.191	ENSCAPG00000013218	RBM28	81	52.000	Cavia_aperea
ENSPMEG00000004292	rbm28	62	55.021	ENSCPOG00000006253	RBM28	58	56.854	Cavia_porcellus
ENSPMEG00000004292	rbm28	79	65.000	ENSCCAG00000035105	RBM28	80	65.000	Cebus_capucinus
ENSPMEG00000004292	rbm28	100	48.990	ENSCATG00000040497	RBM28	80	65.000	Cercocebus_atys
ENSPMEG00000004292	rbm28	100	48.030	ENSCLAG00000003707	RBM28	60	55.928	Chinchilla_lanigera
ENSPMEG00000004292	rbm28	100	49.176	ENSCSAG00000010161	RBM28	58	56.347	Chlorocebus_sabaeus
ENSPMEG00000004292	rbm28	59	56.000	ENSCHOG00000001994	-	63	56.000	Choloepus_hoffmanni
ENSPMEG00000004292	rbm28	60	47.095	ENSCPBG00000018088	RBM28	81	51.319	Chrysemys_picta_bellii
ENSPMEG00000004292	rbm28	90	48.807	ENSCANG00000038397	RBM28	77	65.000	Colobus_angolensis_palliatus
ENSPMEG00000004292	rbm28	64	54.379	ENSCGRG00001021278	Rbm28	57	55.531	Cricetulus_griseus_chok1gshd
ENSPMEG00000004292	rbm28	64	54.379	ENSCGRG00000005098	Rbm28	58	55.752	Cricetulus_griseus_crigri
ENSPMEG00000004292	rbm28	100	60.285	ENSCSEG00000004212	rbm28	60	68.874	Cynoglossus_semilaevis
ENSPMEG00000004292	rbm28	59	82.743	ENSCVAG00000010493	rbm28	99	77.113	Cyprinodon_variegatus
ENSPMEG00000004292	rbm28	82	63.402	ENSDARG00000025332	rbm28	75	59.911	Danio_rerio
ENSPMEG00000004292	rbm28	64	52.333	ENSDNOG00000001124	RBM28	58	54.222	Dasypus_novemcinctus
ENSPMEG00000004292	rbm28	74	52.610	ENSDORG00000004184	Rbm28	87	55.066	Dipodomys_ordii
ENSPMEG00000004292	rbm28	100	45.229	ENSETEG00000007130	RBM28	56	50.234	Echinops_telfairi
ENSPMEG00000004292	rbm28	58	42.601	ENSEBUG00000004419	rbm28	60	42.152	Eptatretus_burgeri
ENSPMEG00000004292	rbm28	63	53.955	ENSEASG00005008528	RBM28	57	56.125	Equus_asinus_asinus
ENSPMEG00000004292	rbm28	63	53.550	ENSECAG00000007745	RBM28	57	55.679	Equus_caballus
ENSPMEG00000004292	rbm28	100	48.293	ENSEEUG00000002389	RBM28	84	59.091	Erinaceus_europaeus
ENSPMEG00000004292	rbm28	100	55.348	ENSELUG00000020602	rbm28	59	60.991	Esox_lucius
ENSPMEG00000004292	rbm28	100	49.872	ENSFCAG00000000946	RBM28	82	65.000	Felis_catus
ENSPMEG00000004292	rbm28	100	49.560	ENSFDAG00000010169	RBM28	59	55.702	Fukomys_damarensis
ENSPMEG00000004292	rbm28	99	51.515	ENSGMOG00000007091	rbm28	60	60.181	Gadus_morhua
ENSPMEG00000004292	rbm28	59	92.274	ENSGAFG00000004802	rbm28	99	92.274	Gambusia_affinis
ENSPMEG00000004292	rbm28	58	70.270	ENSGACG00000012612	rbm28	100	61.857	Gasterosteus_aculeatus
ENSPMEG00000004292	rbm28	82	52.764	ENSGAGG00000008873	RBM28	88	58.173	Gopherus_agassizii
ENSPMEG00000004292	rbm28	95	48.404	ENSGGOG00000004644	RBM28	59	56.347	Gorilla_gorilla
ENSPMEG00000004292	rbm28	100	64.120	ENSHBUG00000009611	rbm28	56	73.775	Haplochromis_burtoni
ENSPMEG00000004292	rbm28	100	50.387	ENSHGLG00000005409	RBM28	59	54.967	Heterocephalus_glaber_female
ENSPMEG00000004292	rbm28	100	50.387	ENSHGLG00100016458	RBM28	59	54.967	Heterocephalus_glaber_male
ENSPMEG00000004292	rbm28	77	61.497	ENSHCOG00000010597	rbm28	84	55.804	Hippocampus_comes
ENSPMEG00000004292	rbm28	62	43.816	ENSIPUG00000007103	rbm28	81	47.917	Ictalurus_punctatus
ENSPMEG00000004292	rbm28	100	48.823	ENSSTOG00000002169	RBM28	57	55.507	Ictidomys_tridecemlineatus
ENSPMEG00000004292	rbm28	56	54.524	ENSJJAG00000022400	Rbm28	59	54.756	Jaculus_jaculus
ENSPMEG00000004292	rbm28	59	74.058	ENSKMAG00000013348	rbm28	99	67.228	Kryptolebias_marmoratus
ENSPMEG00000004292	rbm28	59	70.067	ENSLBEG00000012998	rbm28	100	62.643	Labrus_bergylta
ENSPMEG00000004292	rbm28	100	46.667	ENSLOCG00000015541	rbm28	76	61.184	Lepisosteus_oculatus
ENSPMEG00000004292	rbm28	100	50.320	ENSLAFG00000010717	RBM28	58	55.705	Loxodonta_africana
ENSPMEG00000004292	rbm28	100	48.990	ENSMFAG00000031036	RBM28	80	65.000	Macaca_fascicularis
ENSPMEG00000004292	rbm28	100	48.928	ENSMMUG00000007250	RBM28	80	65.000	Macaca_mulatta
ENSPMEG00000004292	rbm28	100	50.779	ENSMNEG00000036970	RBM28	79	65.000	Macaca_nemestrina
ENSPMEG00000004292	rbm28	84	48.057	ENSMLEG00000037717	RBM28	57	57.653	Mandrillus_leucophaeus
ENSPMEG00000004292	rbm28	100	65.718	ENSMAMG00000008525	rbm28	94	64.344	Mastacembelus_armatus
ENSPMEG00000004292	rbm28	93	62.639	ENSMZEG00005019625	rbm28	64	72.848	Maylandia_zebra
ENSPMEG00000004292	rbm28	64	53.374	ENSMAUG00000002263	Rbm28	57	55.432	Mesocricetus_auratus
ENSPMEG00000004292	rbm28	63	53.012	ENSMICG00000000107	RBM28	60	56.823	Microcebus_murinus
ENSPMEG00000004292	rbm28	100	50.517	ENSMOCG00000014615	Rbm28	59	55.580	Microtus_ochrogaster
ENSPMEG00000004292	rbm28	58	65.011	ENSMMOG00000008600	rbm28	90	65.011	Mola_mola
ENSPMEG00000004292	rbm28	100	49.682	ENSMODG00000015151	RBM28	58	56.954	Monodelphis_domestica
ENSPMEG00000004292	rbm28	59	70.067	ENSMALG00000006419	rbm28	100	64.000	Monopterus_albus
ENSPMEG00000004292	rbm28	100	50.455	MGP_CAROLIEiJ_G0028162	Rbm28	59	56.125	Mus_caroli
ENSPMEG00000004292	rbm28	100	49.299	ENSMUSG00000029701	Rbm28	59	56.793	Mus_musculus
ENSPMEG00000004292	rbm28	100	51.299	MGP_PahariEiJ_G0021920	Rbm28	59	56.733	Mus_pahari
ENSPMEG00000004292	rbm28	100	49.045	MGP_SPRETEiJ_G0029162	Rbm28	59	56.347	Mus_spretus
ENSPMEG00000004292	rbm28	100	49.743	ENSMPUG00000006511	RBM28	58	55.310	Mustela_putorius_furo
ENSPMEG00000004292	rbm28	100	50.570	ENSMLUG00000002186	RBM28	58	55.556	Myotis_lucifugus
ENSPMEG00000004292	rbm28	100	49.157	ENSNGAG00000006480	-	59	55.257	Nannospalax_galili
ENSPMEG00000004292	rbm28	100	47.984	ENSNGAG00000017946	-	57	53.258	Nannospalax_galili
ENSPMEG00000004292	rbm28	70	65.000	ENSNLEG00000012307	RBM28	80	65.000	Nomascus_leucogenys
ENSPMEG00000004292	rbm28	82	56.962	ENSMEUG00000009611	RBM28	83	58.491	Notamacropus_eugenii
ENSPMEG00000004292	rbm28	100	48.465	ENSODEG00000003213	-	57	53.215	Octodon_degus
ENSPMEG00000004292	rbm28	80	55.890	ENSODEG00000013217	-	82	57.614	Octodon_degus
ENSPMEG00000004292	rbm28	59	73.348	ENSONIG00000014924	rbm28	59	73.230	Oreochromis_niloticus
ENSPMEG00000004292	rbm28	100	45.638	ENSOANG00000000815	-	59	50.547	Ornithorhynchus_anatinus
ENSPMEG00000004292	rbm28	100	48.439	ENSOCUG00000003009	RBM28	57	55.928	Oryctolagus_cuniculus
ENSPMEG00000004292	rbm28	99	64.898	ENSORLG00000009636	rbm28	59	70.549	Oryzias_latipes
ENSPMEG00000004292	rbm28	59	70.769	ENSORLG00020002123	rbm28	61	70.769	Oryzias_latipes_hni
ENSPMEG00000004292	rbm28	85	71.429	ENSORLG00015015030	rbm28	99	71.429	Oryzias_latipes_hsok
ENSPMEG00000004292	rbm28	59	72.406	ENSOMEG00000007801	rbm28	60	72.406	Oryzias_melastigma
ENSPMEG00000004292	rbm28	82	62.500	ENSOGAG00000006011	RBM28	79	62.500	Otolemur_garnettii
ENSPMEG00000004292	rbm28	100	50.773	ENSOARG00000002547	RBM28	59	55.629	Ovis_aries
ENSPMEG00000004292	rbm28	100	48.799	ENSPPAG00000041730	RBM28	80	65.000	Pan_paniscus
ENSPMEG00000004292	rbm28	100	50.260	ENSPPRG00000004420	RBM28	82	65.000	Panthera_pardus
ENSPMEG00000004292	rbm28	100	49.870	ENSPTIG00000008550	RBM28	82	65.000	Panthera_tigris_altaica
ENSPMEG00000004292	rbm28	100	48.990	ENSPTRG00000019659	RBM28	80	65.000	Pan_troglodytes
ENSPMEG00000004292	rbm28	100	48.928	ENSPANG00000022295	RBM28	80	65.000	Papio_anubis
ENSPMEG00000004292	rbm28	100	53.916	ENSPKIG00000023453	rbm28	62	56.224	Paramormyrops_kingsleyae
ENSPMEG00000004292	rbm28	90	65.349	ENSPMGG00000012840	rbm28	94	65.349	Periophthalmus_magnuspinnatus
ENSPMEG00000004292	rbm28	100	50.584	ENSPCIG00000012810	RBM28	59	55.234	Phascolarctos_cinereus
ENSPMEG00000004292	rbm28	100	99.476	ENSPFOG00000018209	rbm28	100	99.476	Poecilia_formosa
ENSPMEG00000004292	rbm28	99	96.982	ENSPLAG00000016078	rbm28	96	96.982	Poecilia_latipinna
ENSPMEG00000004292	rbm28	99	91.933	ENSPREG00000014287	rbm28	99	91.134	Poecilia_reticulata
ENSPMEG00000004292	rbm28	100	49.112	ENSPPYG00000017975	RBM28	58	56.125	Pongo_abelii
ENSPMEG00000004292	rbm28	76	51.811	ENSPCAG00000008223	RBM28	82	51.639	Procavia_capensis
ENSPMEG00000004292	rbm28	95	49.302	ENSPCOG00000016797	RBM28	79	65.000	Propithecus_coquereli
ENSPMEG00000004292	rbm28	70	60.369	ENSPVAG00000005443	RBM28	67	63.682	Pteropus_vampyrus
ENSPMEG00000004292	rbm28	100	64.212	ENSPNYG00000014003	rbm28	59	73.128	Pundamilia_nyererei
ENSPMEG00000004292	rbm28	100	49.935	ENSRNOG00000005468	Rbm28	86	54.206	Rattus_norvegicus
ENSPMEG00000004292	rbm28	69	65.000	ENSRBIG00000033990	RBM28	80	65.000	Rhinopithecus_bieti
ENSPMEG00000004292	rbm28	100	50.318	ENSRROG00000040747	RBM28	80	65.000	Rhinopithecus_roxellana
ENSPMEG00000004292	rbm28	85	44.030	ENSSBOG00000012308	RBM28	72	58.209	Saimiri_boliviensis_boliviensis
ENSPMEG00000004292	rbm28	96	48.794	ENSSHAG00000017017	RBM28	59	56.036	Sarcophilus_harrisii
ENSPMEG00000004292	rbm28	100	53.250	ENSSFOG00015001231	rbm28	60	58.889	Scleropages_formosus
ENSPMEG00000004292	rbm28	66	60.630	ENSSMAG00000003885	rbm28	90	65.859	Scophthalmus_maximus
ENSPMEG00000004292	rbm28	59	73.289	ENSSDUG00000014270	rbm28	88	73.348	Seriola_dumerili
ENSPMEG00000004292	rbm28	59	72.687	ENSSLDG00000020099	rbm28	100	64.487	Seriola_lalandi_dorsalis
ENSPMEG00000004292	rbm28	78	58.333	ENSSARG00000008303	RBM28	80	56.750	Sorex_araneus
ENSPMEG00000004292	rbm28	67	55.882	ENSSPUG00000000838	RBM28	80	55.882	Sphenodon_punctatus
ENSPMEG00000004292	rbm28	58	72.321	ENSSPAG00000023305	rbm28	62	72.807	Stegastes_partitus
ENSPMEG00000004292	rbm28	100	50.514	ENSSSCG00000031847	RBM28	59	56.332	Sus_scrofa
ENSPMEG00000004292	rbm28	59	64.680	ENSTRUG00000013311	rbm28	58	64.680	Takifugu_rubripes
ENSPMEG00000004292	rbm28	100	57.733	ENSTNIG00000017962	rbm28	59	67.473	Tetraodon_nigroviridis
ENSPMEG00000004292	rbm28	74	55.556	ENSTBEG00000012749	RBM28	72	54.277	Tupaia_belangeri
ENSPMEG00000004292	rbm28	89	55.721	ENSTTRG00000013647	RBM28	87	55.941	Tursiops_truncatus
ENSPMEG00000004292	rbm28	100	47.503	ENSUAMG00000006949	RBM28	60	51.441	Ursus_americanus
ENSPMEG00000004292	rbm28	100	48.931	ENSUMAG00000005997	RBM28	58	55.556	Ursus_maritimus
ENSPMEG00000004292	rbm28	85	46.708	ENSVPAG00000008304	RBM28	60	50.334	Vicugna_pacos
ENSPMEG00000004292	rbm28	100	48.210	ENSVVUG00000007270	RBM28	58	55.556	Vulpes_vulpes
ENSPMEG00000004292	rbm28	63	50.497	ENSXETG00000009271	rbm28	59	53.145	Xenopus_tropicalis
ENSPMEG00000004292	rbm28	59	86.414	ENSXCOG00000020357	rbm28	92	86.414	Xiphophorus_couchianus
ENSPMEG00000004292	rbm28	59	92.428	ENSXMAG00000004415	rbm28	99	88.654	Xiphophorus_maculatus